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The map label for this gene is dksA [H]

Identifier: 108758374

GI number: 108758374

Start: 3748210

End: 3748572

Strand: Direct

Name: dksA [H]

Synonym: MXAN_3200

Alternate gene names: 108758374

Gene position: 3748210-3748572 (Clockwise)

Preceding gene: 108756810

Following gene: 108760153

Centisome position: 41.01

GC content: 58.95

Gene sequence:

>363_bases
GTGAACCAGAAAGATCTCAAGCGTTACAAGAAGATGCTCGAGGACAGCAAGGCGAGCCTGCTCGAGAGCGCCAAGAAGAC
CCTGGTGGAGGAGTCCAGTTTCGACACGGACGACCTTCCCGATGAGATCGACCTGGCGTCTTCCGAGTATGCGCAGTCAA
TGGTCTTCCGTCTGCGGGACCGGGAGAAGTTCCTGTTGCAGAAGATCGAAAAGGCGCTGGTCCGCATCGAGGACGGCACC
TTCGGCGTCTGCGAGCGGTGTGAAGAGGACATCTCGCCCAAGCGACTGGATGCGCGCCCGGTGACGACGCTTTGCATCCG
CTGCAAGGAGGAGCAGGAGAAGAAGGAGAAATCCTACGGCTGA

Upstream 100 bases:

>100_bases
ACCCACGTCAGCTTGACACTGAAGACCCCATGAATGAAGCTTTCGGGCCCTTTTTTTGGGGTGCAGGGCCCCAAAACCTC
GCTGAACTGGAGCGAAGGCT

Downstream 100 bases:

>100_bases
GCACCGAGGCAGTGAGGGCCGCGCGGGGGATACCCCCGTGCGGCCCTTGGCATTTCAGGACGTGGGCGCTTGGATTTCCA
CGCGCAGCAACTGACGGCCA

Product: putative RNA polymerase-binding protein DksA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
MNQKDLKRYKKMLEDSKASLLESAKKTLVEESSFDTDDLPDEIDLASSEYAQSMVFRLRDREKFLLQKIEKALVRIEDGT
FGVCERCEEDISPKRLDARPVTTLCIRCKEEQEKKEKSYG

Sequences:

>Translated_120_residues
MNQKDLKRYKKMLEDSKASLLESAKKTLVEESSFDTDDLPDEIDLASSEYAQSMVFRLRDREKFLLQKIEKALVRIEDGT
FGVCERCEEDISPKRLDARPVTTLCIRCKEEQEKKEKSYG
>Mature_120_residues
MNQKDLKRYKKMLEDSKASLLESAKKTLVEESSFDTDDLPDEIDLASSEYAQSMVFRLRDREKFLLQKIEKALVRIEDGT
FGVCERCEEDISPKRLDARPVTTLCIRCKEEQEKKEKSYG

Specific function: Dosage-dependent suppressor of a dnaK deletion mutation. It suppressed not only the temperature-sensitive growth but also the filamentous phenotype of the dnaK deletion strain, while the defect of lambda growth is not suppressed [H]

COG id: COG1734

COG function: function code T; DnaK suppressor protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 dksA C4-type zinc finger [H]

Homologues:

Organism=Escherichia coli, GI1786338, Length=117, Percent_Identity=38.4615384615385, Blast_Score=82, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012784
- InterPro:   IPR020460
- InterPro:   IPR000962
- InterPro:   IPR020458 [H]

Pfam domain/function: PF01258 zf-dskA_traR [H]

EC number: NA

Molecular weight: Translated: 13987; Mature: 13987

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: PS01102 ZF_DKSA_1 ; PS51128 ZF_DKSA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQKDLKRYKKMLEDSKASLLESAKKTLVEESSFDTDDLPDEIDLASSEYAQSMVFRLRD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
REKFLLQKIEKALVRIEDGTFGVCERCEEDISPKRLDARPVTTLCIRCKEEQEKKEKSYG
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNQKDLKRYKKMLEDSKASLLESAKKTLVEESSFDTDDLPDEIDLASSEYAQSMVFRLRD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
REKFLLQKIEKALVRIEDGTFGVCERCEEDISPKRLDARPVTTLCIRCKEEQEKKEKSYG
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]