| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
Click here to switch to the map view.
The map label for this gene is mreC [H]
Identifier: 108758372
GI number: 108758372
Start: 3088568
End: 3089428
Strand: Direct
Name: mreC [H]
Synonym: MXAN_2645
Alternate gene names: 108758372
Gene position: 3088568-3089428 (Clockwise)
Preceding gene: 108757569
Following gene: 108759179
Centisome position: 33.79
GC content: 68.18
Gene sequence:
>861_bases GTGTGGTCGCTCCTGAAGCGGTATTACCGCCCCCTCATCGTGGGCTTTCTGCTCCTTTCGCCGCTGGTGGCCTTCCTGCT CGGTGGCCGGAAGGGCAGGGAACCCAACTTCGTCGACCGGGCGATCATCGCCGTCGCGTCCCCCGTGCAACAGGGGCTGA CGTCCGTCATTGAGGGTGGGGTGGCTGGGGTCCAGAACTACCTGGACCTCCGAGGCGTGCGGCAGGAGAATGACGCATTG CGCTTGGAGAACCTCCAACTGCGCGCGGCGGTGCAGTCCCTGGGGGAGTCGCGGATGGAGAACGAGCGGCTGCGCAAGCT GCTCAACTACGCGGAGGCCGAGCCCGGGCCGGAAATCCCCGCGCGGGTGGTGGGCGTCAATCCGGTGGCGAAGCTGCTGT CGGTCCGCATCAGCAGTGGTGAGCAGCAGGGTGTGTTTCGCGGCATGTCCGTGGTGACGCCGGATGGAATCGTGGGACAG GTCATCCGGGCGACGGGCGGGTATGCGGATGTGGCGCTGGTGACGGACCCGCAGAGCCGGGTGGCGGTGCGTGTGCAGCG CTCGCGGGCCCGGGGCACGGCGGCGGGAACGGGAGGCGGGCCCCTGAAGTTGGAGAACATGCTGCGCACCGAGGATGTGG AGGACGGTGACCTCATCATCACCGCGGGCACGGACGGCATCTATCCGCCCGGCGTGGTGGTGGGACGCGTGACGAACCTG GAGAAGAAGGAGCACGGCATGTTCCAGGGCGCGGACATCGTCCCGGCGGTGGATACGAGCAAGCTGGAAGAGGTGTTGGT GGTGGGCAGCCCCTACAGCGCCATGGCGCCGGGCAGCGCCGCGGAGGGCGCGTCGAAATGA
Upstream 100 bases:
>100_bases CAGGCCTTGACTGCCTAGGATAACGCACCGGAAAATGCAAGCGATTTAGAGCCCTTAGCCAGCCCCTGCTCCCCCATTAC ACCCCCGGAAACTCCTGCCT
Downstream 100 bases:
>100_bases AGTTCCTGGTGTCCGTCGCACTGGCGCTGGCGTTGCTCACGCTGGAATCGGTCCTGGTGAAGCAGGCGGGCCTGGAGCTC GGCCGGATTGACGTCACCGT
Product: rod shape-determining protein MreC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 286; Mature: 286
Protein sequence:
>286_residues MWSLLKRYYRPLIVGFLLLSPLVAFLLGGRKGREPNFVDRAIIAVASPVQQGLTSVIEGGVAGVQNYLDLRGVRQENDAL RLENLQLRAAVQSLGESRMENERLRKLLNYAEAEPGPEIPARVVGVNPVAKLLSVRISSGEQQGVFRGMSVVTPDGIVGQ VIRATGGYADVALVTDPQSRVAVRVQRSRARGTAAGTGGGPLKLENMLRTEDVEDGDLIITAGTDGIYPPGVVVGRVTNL EKKEHGMFQGADIVPAVDTSKLEEVLVVGSPYSAMAPGSAAEGASK
Sequences:
>Translated_286_residues MWSLLKRYYRPLIVGFLLLSPLVAFLLGGRKGREPNFVDRAIIAVASPVQQGLTSVIEGGVAGVQNYLDLRGVRQENDAL RLENLQLRAAVQSLGESRMENERLRKLLNYAEAEPGPEIPARVVGVNPVAKLLSVRISSGEQQGVFRGMSVVTPDGIVGQ VIRATGGYADVALVTDPQSRVAVRVQRSRARGTAAGTGGGPLKLENMLRTEDVEDGDLIITAGTDGIYPPGVVVGRVTNL EKKEHGMFQGADIVPAVDTSKLEEVLVVGSPYSAMAPGSAAEGASK >Mature_286_residues MWSLLKRYYRPLIVGFLLLSPLVAFLLGGRKGREPNFVDRAIIAVASPVQQGLTSVIEGGVAGVQNYLDLRGVRQENDAL RLENLQLRAAVQSLGESRMENERLRKLLNYAEAEPGPEIPARVVGVNPVAKLLSVRISSGEQQGVFRGMSVVTPDGIVGQ VIRATGGYADVALVTDPQSRVAVRVQRSRARGTAAGTGGGPLKLENMLRTEDVEDGDLIITAGTDGIYPPGVVVGRVTNL EKKEHGMFQGADIVPAVDTSKLEEVLVVGSPYSAMAPGSAAEGASK
Specific function: Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins [H]
COG id: COG1792
COG function: function code M; Cell shape-determining protein
Gene ontology:
Cell location: Inner Membrane-Anchored [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mreC family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007221 - InterPro: IPR005223 [H]
Pfam domain/function: PF04085 MreC [H]
EC number: NA
Molecular weight: Translated: 30379; Mature: 30379
Theoretical pI: Translated: 8.78; Mature: 8.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWSLLKRYYRPLIVGFLLLSPLVAFLLGGRKGREPNFVDRAIIAVASPVQQGLTSVIEGG CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC VAGVQNYLDLRGVRQENDALRLENLQLRAAVQSLGESRMENERLRKLLNYAEAEPGPEIP HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC ARVVGVNPVAKLLSVRISSGEQQGVFRGMSVVTPDGIVGQVIRATGGYADVALVTDPQSR EEEECCCHHHHHHHHHHCCCCCCHHHHCCEEECCCHHHHHHHHHCCCCEEEEEEECCHHH VAVRVQRSRARGTAAGTGGGPLKLENMLRTEDVEDGDLIITAGTDGIYPPGVVVGRVTNL HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEEEHHHCC EKKEHGMFQGADIVPAVDTSKLEEVLVVGSPYSAMAPGSAAEGASK CHHHCCCCCCCCCCCCCCHHHHHHEEEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure MWSLLKRYYRPLIVGFLLLSPLVAFLLGGRKGREPNFVDRAIIAVASPVQQGLTSVIEGG CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC VAGVQNYLDLRGVRQENDALRLENLQLRAAVQSLGESRMENERLRKLLNYAEAEPGPEIP HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC ARVVGVNPVAKLLSVRISSGEQQGVFRGMSVVTPDGIVGQVIRATGGYADVALVTDPQSR EEEECCCHHHHHHHHHHCCCCCCHHHHCCEEECCCHHHHHHHHHCCCCEEEEEEECCHHH VAVRVQRSRARGTAAGTGGGPLKLENMLRTEDVEDGDLIITAGTDGIYPPGVVVGRVTNL HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEEEHHHCC EKKEHGMFQGADIVPAVDTSKLEEVLVVGSPYSAMAPGSAAEGASK CHHHCCCCCCCCCCCCCCHHHHHHEEEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1400225; 1400224; 9384377 [H]