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The map label for this gene is ybgC [C]

Identifier: 108758346

GI number: 108758346

Start: 5516405

End: 5516833

Strand: Reverse

Name: ybgC [C]

Synonym: MXAN_4456

Alternate gene names: 108758346

Gene position: 5516833-5516405 (Counterclockwise)

Preceding gene: 108762296

Following gene: 108757339

Centisome position: 60.36

GC content: 65.03

Gene sequence:

>429_bases
ATGGTCGAGGCCCGCCTTCGCGTCATCTACGGCGACACTGATCAGATGGGTGTCGTCTACTACGCGAATTACTTCCGCTA
TTTCGAGTTCGCGCGCAGTGAGTACTTCCGCGCCCGGGGTGGCAGCTACGCCGAGCTGGAGCGCTCTGGTGCCCTGCTAC
CCGTGGCCGAGGCGAGCTGCCAGTACAAGGCATCCGCGCGCTACGACGATCTGTTGGTCATCCAAACCACCGTGAGTGAG
TTGCGCCGCGCCTCCATCGTGTTCACCTACGCGCTGTTTCGTGACGGTGCGCCACGCACGCTGCTCTGCACCGGTATGAC
CCGTCATGCCTGCGTGGGGCGGGACGGCAAGCCGACGCGGCTGCCGGACTCCCTCATCCGGCTGCTCGAAACGACCGGGC
CTTCCCCGGGCTCTTCCCCTTCCACCTGA

Upstream 100 bases:

>100_bases
ATTGGGATGAGAACCATCTCCGCCGGGATGGTGAGAAGCAACCAACAACGCGTGTCACTGCTTGGACGCCGCACATCGCG
CTGTTAGGGTCGCTCGATTC

Downstream 100 bases:

>100_bases
ACCCTTCCGGCATACGCAAGGAGCACACACATGGATCGCAACCTGGCAATGGAGGTCGTGCGCGTCACCGAGATGGCGGC
CATCGCCTCCGCACGACTGA

Product: thioesterase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MVEARLRVIYGDTDQMGVVYYANYFRYFEFARSEYFRARGGSYAELERSGALLPVAEASCQYKASARYDDLLVIQTTVSE
LRRASIVFTYALFRDGAPRTLLCTGMTRHACVGRDGKPTRLPDSLIRLLETTGPSPGSSPST

Sequences:

>Translated_142_residues
MVEARLRVIYGDTDQMGVVYYANYFRYFEFARSEYFRARGGSYAELERSGALLPVAEASCQYKASARYDDLLVIQTTVSE
LRRASIVFTYALFRDGAPRTLLCTGMTRHACVGRDGKPTRLPDSLIRLLETTGPSPGSSPST
>Mature_142_residues
MVEARLRVIYGDTDQMGVVYYANYFRYFEFARSEYFRARGGSYAELERSGALLPVAEASCQYKASARYDDLLVIQTTVSE
LRRASIVFTYALFRDGAPRTLLCTGMTRHACVGRDGKPTRLPDSLIRLLETTGPSPGSSPST

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 4-hydroxybenzoyl-CoA thioesterase family [H]

Homologues:

Organism=Escherichia coli, GI1786957, Length=122, Percent_Identity=37.7049180327869, Blast_Score=72, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006684
- InterPro:   IPR008272
- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: NA

Molecular weight: Translated: 15854; Mature: 15854

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEARLRVIYGDTDQMGVVYYANYFRYFEFARSEYFRARGGSYAELERSGALLPVAEASC
CCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCEEEECCCCC
QYKASARYDDLLVIQTTVSELRRASIVFTYALFRDGAPRTLLCTGMTRHACVGRDGKPTR
CCCCCCCCCCEEEEHHHHHHHHHHHHHEEEEECCCCCCCEEEECCCCCHHCCCCCCCCCC
LPDSLIRLLETTGPSPGSSPST
CHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MVEARLRVIYGDTDQMGVVYYANYFRYFEFARSEYFRARGGSYAELERSGALLPVAEASC
CCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCEEEECCCCC
QYKASARYDDLLVIQTTVSELRRASIVFTYALFRDGAPRTLLCTGMTRHACVGRDGKPTR
CCCCCCCCCCEEEEHHHHHHHHHHHHHEEEEECCCCCCCEEEECCCCCHHCCCCCCCCCC
LPDSLIRLLETTGPSPGSSPST
CHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]