| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108758307
Identifier: 108758307
GI number: 108758307
Start: 3966179
End: 3966781
Strand: Reverse
Name: 108758307
Synonym: MXAN_3414
Alternate gene names: NA
Gene position: 3966781-3966179 (Counterclockwise)
Preceding gene: 108759546
Following gene: 108757323
Centisome position: 43.4
GC content: 69.82
Gene sequence:
>603_bases GTGACCTTGCGCCGTACCGTGGTGGGTGGACTGGCTGTACTGGGCGCCCTGACGCTCATCCTGGGCGTGAGCGGCGGGGT GTATGGGCTGACGGTGGCGCGCCGCGGCTTCTCGGCCCGGGAGGCCCCCTCGGCGCTCGAAGCGAAGGTGGCGCGTGCGG CACGGAGCTTCAGCATGCCCGCGGGGGCCCGGGAGCTGAAGAATCCGCTCGCGCCCCTCTCACCGCAGGCCCTCGCCGAG GCGCGAGCCCATTGGGCTGACCACTGCGCCATCTGCCACGCGGCGGATGGCAGCGGGCAGACGCCCATCGGCCAGGGGCT CTACCCGCGCGCCCCCAACATGCGCGCCACCCCGACCCAGGACCTGAGCGATGGCGAGCTGTACTGGATCATCCAGAACG GCATCCGCCTGACCGGCATGCCCGCCTGGGGACAACTCCACGAGGGGGCGGGCAACAACGATAGCTGGGCCCTCGTCGAA CTCATCCGCAGGCTGCCGCGTCTCGGCGAGGAAGAGCTCGATGAAATCAAAGCCGCCCTGCCCCAATCCCGGCATGAGCT TGAAGAGCAGCGCATCGAGGACGCGTTCCTCGAAGGACAGTAG
Upstream 100 bases:
>100_bases CGATGAGCATCTCGTCCGTCTCCGTCATCGCCAATGCCCTGCGGCTGAAGCGGCTGGACCTCTGACCGCCACCTCGCCGG ATTCAAGAGGAGAATACCCC
Downstream 100 bases:
>100_bases CCGTCACATGTGAAAGGAGCGCAATGCCATGAGCCCCCAACCCGTTCGTCCCCGCCTCACGAGCCTCGCCGTGGTGACCC TCGCCCTGTTGACTCCGGCG
Product: putative cytochrome c
Products: NA
Alternate protein names: Cytochrome C; Cytochrome C Class I Protein; Cytochrome C Class I; Di-Heme Cytochrome C
Number of amino acids: Translated: 200; Mature: 199
Protein sequence:
>200_residues MTLRRTVVGGLAVLGALTLILGVSGGVYGLTVARRGFSAREAPSALEAKVARAARSFSMPAGARELKNPLAPLSPQALAE ARAHWADHCAICHAADGSGQTPIGQGLYPRAPNMRATPTQDLSDGELYWIIQNGIRLTGMPAWGQLHEGAGNNDSWALVE LIRRLPRLGEEELDEIKAALPQSRHELEEQRIEDAFLEGQ
Sequences:
>Translated_200_residues MTLRRTVVGGLAVLGALTLILGVSGGVYGLTVARRGFSAREAPSALEAKVARAARSFSMPAGARELKNPLAPLSPQALAE ARAHWADHCAICHAADGSGQTPIGQGLYPRAPNMRATPTQDLSDGELYWIIQNGIRLTGMPAWGQLHEGAGNNDSWALVE LIRRLPRLGEEELDEIKAALPQSRHELEEQRIEDAFLEGQ >Mature_199_residues TLRRTVVGGLAVLGALTLILGVSGGVYGLTVARRGFSAREAPSALEAKVARAARSFSMPAGARELKNPLAPLSPQALAEA RAHWADHCAICHAADGSGQTPIGQGLYPRAPNMRATPTQDLSDGELYWIIQNGIRLTGMPAWGQLHEGAGNNDSWALVEL IRRLPRLGEEELDEIKAALPQSRHELEEQRIEDAFLEGQ
Specific function: Unknown
COG id: COG2863
COG function: function code C; Cytochrome c553
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21491; Mature: 21359
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLRRTVVGGLAVLGALTLILGVSGGVYGLTVARRGFSAREAPSALEAKVARAARSFSMP CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCC AGARELKNPLAPLSPQALAEARAHWADHCAICHAADGSGQTPIGQGLYPRAPNMRATPTQ CCHHHHHCCCCCCCHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCC DLSDGELYWIIQNGIRLTGMPAWGQLHEGAGNNDSWALVELIRRLPRLGEEELDEIKAAL CCCCCCEEEEEECCEEEECCCCCHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHC PQSRHELEEQRIEDAFLEGQ CHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TLRRTVVGGLAVLGALTLILGVSGGVYGLTVARRGFSAREAPSALEAKVARAARSFSMP CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCC AGARELKNPLAPLSPQALAEARAHWADHCAICHAADGSGQTPIGQGLYPRAPNMRATPTQ CCHHHHHCCCCCCCHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCC DLSDGELYWIIQNGIRLTGMPAWGQLHEGAGNNDSWALVELIRRLPRLGEEELDEIKAAL CCCCCCEEEEEECCEEEECCCCCHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHC PQSRHELEEQRIEDAFLEGQ CHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA