Click here to switch to the map view.

The map label for this gene is insC1 [C]

Identifier: 108758243

GI number: 108758243

Start: 2458190

End: 2458459

Strand: Reverse

Name: insC1 [C]

Synonym: MXAN_2123

Alternate gene names: 108758243

Gene position: 2458459-2458190 (Counterclockwise)

Preceding gene: 108760635

Following gene: 108763922

Centisome position: 26.9

GC content: 62.59

Gene sequence:

>270_bases
GTGAGAAAGAGCAGGTTTACCGAGGAGCAGATGGTCCGCATCCTGCGGGAGGCGGAGACGCCTGGGGCCAGCGTGGTGGA
GGTGGCCCGGAAGCACGGCGTCGTCGAGCAGACGCTCTACCGGTGGCGGCAGAAGTTCGGCGGCATGGAGGCAGGCGACG
CGACGCGGCTCAGGGAGTTGGAGAAGGAGAACGCGCGTCTGAAGAAGCTGCTGGCCGAGAGGGACCTCGAAATCGAGGTC
ATGAAGGAAATCTCCACAAAAAAATGGTGA

Upstream 100 bases:

>100_bases
CCCAGGGGTGAACTCCATAGGGATTCGATATGGTCTGCCCCCCGATTTTCGGACCAGTTGAAGCGTGAGAGAGTCCTCGC
GGCCAGGAGGTAGGGCGGTC

Downstream 100 bases:

>100_bases
GCGCGCCTGTCCGCCGTCGGCAGGTGCGGTACGCCATGGGGAAAGGCGTGTCGCAGCGCCGGGCGTGCGCGCTACTCCAG
GTGGCCGGCAGTAGCCTGGG

Product: IS3 family transposase OrfA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 89; Mature: 89

Protein sequence:

>89_residues
MRKSRFTEEQMVRILREAETPGASVVEVARKHGVVEQTLYRWRQKFGGMEAGDATRLRELEKENARLKKLLAERDLEIEV
MKEISTKKW

Sequences:

>Translated_89_residues
MRKSRFTEEQMVRILREAETPGASVVEVARKHGVVEQTLYRWRQKFGGMEAGDATRLRELEKENARLKKLLAERDLEIEV
MKEISTKKW
>Mature_89_residues
MRKSRFTEEQMVRILREAETPGASVVEVARKHGVVEQTLYRWRQKFGGMEAGDATRLRELEKENARLKKLLAERDLEIEV
MKEISTKKW

Specific function: Involved in the transposition of the insertion sequence is2 [C]

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 8 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR002514 [H]

Pfam domain/function: PF01527 Transposase_8 [H]

EC number: NA

Molecular weight: Translated: 10503; Mature: 10503

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKSRFTEEQMVRILREAETPGASVVEVARKHGVVEQTLYRWRQKFGGMEAGDATRLREL
CCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHH
EKENARLKKLLAERDLEIEVMKEISTKKW
HHHHHHHHHHHHHCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MRKSRFTEEQMVRILREAETPGASVVEVARKHGVVEQTLYRWRQKFGGMEAGDATRLREL
CCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHH
EKENARLKKLLAERDLEIEVMKEISTKKW
HHHHHHHHHHHHHCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2544911 [H]