| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is yafP [C]
Identifier: 108758242
GI number: 108758242
Start: 1785895
End: 1786416
Strand: Reverse
Name: yafP [C]
Synonym: MXAN_1523
Alternate gene names: 108758242
Gene position: 1786416-1785895 (Counterclockwise)
Preceding gene: 108762622
Following gene: 108757456
Centisome position: 19.55
GC content: 72.99
Gene sequence:
>522_bases ATGGGCGCGGAAGGACTCCTGCTGAGGCCCGCGAAGGAGTCCGACCGCCGCACCCTGTGGCGCATCCACACCCGGGCCGT GGAAGCCCTGTGCCTTCGCGCGTACGCGCCGCACGAGGTGAGCACCTGGGTGCGGCTCTTGAAACCGGAGGGCTACCTGC GGCCGGAGCGTCCGCGCACGGTGCTGGTGGCGGAACGCGGCCGGCGCGCGGTGGGCTTCGGCCAGGTGGACGCGGCGCTA GGTGAGCTGGAAGCGCTCTACGTGGTGCCAGACGAGGCGGGCCATGGCGTGGGCCCCGCATTGCTGTCGGCCCTGGAGTC CGCCGTCTGGCGGGGCAGCGCGCCGCTGATGGGGCTGGATGCCAGCCTGAACGCCGAACACTTCTATCAGCGGCACGGCT ATGCCTCCGTCCACGCCTCCCGGCGCCCACTCACGGTCGACGTCCAGTTGGCGTGCGTGCGGATGCAGAAGCAGCGGCCG GCCACGGCCATGGGGCGGTGGCCGGCCTGGCGCCGCGGCTAG
Upstream 100 bases:
>100_bases ACCATCGGATTCGACCCGGTGGAGGACCGGCGGCGCTTCCACGTCACGCCCGGGGGCGTCGTGGTGATTCCCAAGGGCAT GAAGGTGACCTGAGACGGCC
Downstream 100 bases:
>100_bases GTGAAGGCCGCCTTCACCTCGGGCTTGTTCAGCACCACCAGGGCCCAGATGCCCACGGGGATGCCCAGACAGGCGCAGGG GCCGCAGCAGGGGATGACGG
Product: acetyltransferase
Products: NA
Alternate protein names: Acetyltransferase; Acetyltransferase GNAT Family; Acetyltransferase Gnat Family; GCN5-Like N-Acetyltransferase; Acetyltransferase Protein
Number of amino acids: Translated: 173; Mature: 172
Protein sequence:
>173_residues MGAEGLLLRPAKESDRRTLWRIHTRAVEALCLRAYAPHEVSTWVRLLKPEGYLRPERPRTVLVAERGRRAVGFGQVDAAL GELEALYVVPDEAGHGVGPALLSALESAVWRGSAPLMGLDASLNAEHFYQRHGYASVHASRRPLTVDVQLACVRMQKQRP ATAMGRWPAWRRG
Sequences:
>Translated_173_residues MGAEGLLLRPAKESDRRTLWRIHTRAVEALCLRAYAPHEVSTWVRLLKPEGYLRPERPRTVLVAERGRRAVGFGQVDAAL GELEALYVVPDEAGHGVGPALLSALESAVWRGSAPLMGLDASLNAEHFYQRHGYASVHASRRPLTVDVQLACVRMQKQRP ATAMGRWPAWRRG >Mature_172_residues GAEGLLLRPAKESDRRTLWRIHTRAVEALCLRAYAPHEVSTWVRLLKPEGYLRPERPRTVLVAERGRRAVGFGQVDAALG ELEALYVVPDEAGHGVGPALLSALESAVWRGSAPLMGLDASLNAEHFYQRHGYASVHASRRPLTVDVQLACVRMQKQRPA TAMGRWPAWRRG
Specific function: Unknown
COG id: COG0454
COG function: function code KR; Histone acetyltransferase HPA2 and related acetyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.3.1.- [C]
Molecular weight: Translated: 19223; Mature: 19092
Theoretical pI: Translated: 10.55; Mature: 10.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAEGLLLRPAKESDRRTLWRIHTRAVEALCLRAYAPHEVSTWVRLLKPEGYLRPERPRT CCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCE VLVAERGRRAVGFGQVDAALGELEALYVVPDEAGHGVGPALLSALESAVWRGSAPLMGLD EEEECCCCCCCCCCHHHHHHCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEECC ASLNAEHFYQRHGYASVHASRRPLTVDVQLACVRMQKQRPATAMGRWPAWRRG CCCCHHHHHHHCCCEEEECCCCCEEEEHHHHHHHHHHCCCCCHHCCCCCCCCC >Mature Secondary Structure GAEGLLLRPAKESDRRTLWRIHTRAVEALCLRAYAPHEVSTWVRLLKPEGYLRPERPRT CCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCE VLVAERGRRAVGFGQVDAALGELEALYVVPDEAGHGVGPALLSALESAVWRGSAPLMGLD EEEECCCCCCCCCCHHHHHHCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEECC ASLNAEHFYQRHGYASVHASRRPLTVDVQLACVRMQKQRPATAMGRWPAWRRG CCCCHHHHHHHCCCEEEECCCCCEEEEHHHHHHHHHHCCCCCHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA