| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108758215
Identifier: 108758215
GI number: 108758215
Start: 2161502
End: 2162839
Strand: Reverse
Name: 108758215
Synonym: MXAN_1836
Alternate gene names: NA
Gene position: 2162839-2161502 (Counterclockwise)
Preceding gene: 108757207
Following gene: 108759505
Centisome position: 23.66
GC content: 70.85
Gene sequence:
>1338_bases ATGGCCACGGTTGAGCTGCCCGCCCTCTACGTCGACACCGTCTCCCTCTTCGCCGAGACGCGCCGCCCTCTCCTCCTCAA CCGCGCTCCGGGCCCCGAGGAGGAGGACGTCCCCGTCGATGCCGCGCTGGAGCTGGAGGTGGTGGACGTCGGCGTAGACG GCATTGCCCGGGCGGCCACGCGCGTCTGGGTGGACGGCGTCCTCGCCTTCGCGGGCGGGGACAGCGTCGAGGTGCAACCC GCCTTCGCGGGGCCGCTGGCGGAGGTGACGCAGACAGCGGACACCCTGCGCGTGGTGCTCCACCCGGCGGTGCCGCTGGC CAGCCAGGCCACCGTCTCCGTCCGCGTCGTCTCGGCCACGGCCGGCGGCGAGCACCTCCTCGACGAGACGTACACCTTCA CCGTGGAGGACAGGACAGCGCCCCGACTCGTGGGCGCCCAGGCCCTGGCGCCGAAGTCCGTGCGCCTCGCCTTCGACGAG GACGTGCGGGTGCCTCCCTCGGCGCGCTTCACCTTCACGCCTCGTGACGCCCCCGCAGTCCCGGTGGCCTCCGTTGGCGC CGCGGCGGATGGCCCCCTCGTTCACCTCGCCCTCGACACGGAAATGACGCCGGACGTGGTGTACGAGGTGCTCGTGGAGG GCGTGACGGACGCGCACGACAACCCGGTGCTCGCCCCCTACCACCGCGCCAGCTTCGCGGGCTTCCGTCCTGCCCGGCCG CCCTCCCGCAGCTTCCAGCTCTGGGACATGCTGCCCCGCCACAACCGCCGCGACGACGTGACGGGCGACCTGCACCGCTT CATCTCCTGCCTCCAGGAGGTGACGGATTTGCTGCTCTCCGACTTGGACGCTTTCCCTGACGTCTTCGACGTGGAGCGCG CGCCAGAGCCCTTCCTCGACGCCATCCTCCAGGACTTGGGCAACCCCTTTGCCTTCGAGCTGGACGTCCTCGCCCGGCGC CGCCTAGCCGCCATCCTCGTGGACATGTACCAGCAGAAGGGCACCGCGCTGGGCCTGCGCAACGCCATCCGCTTCTTCCT CGGAATTGAGGTGCGCGCCGTCTCCCCCTTCGCCTCGGACACCCTCGTGCTGGGCGAGTCCGAGCTGGGCGTGGACTGGG TGCTGGGCCCCTCGGAGCGCTTCGCCCGCTACGCCTTCAACGTCGAGGTGGAGCGCCTCCTCTCGACTGCGGAGCGCCAG CGCCTGCGCACCCTCGTCGAGTACCTCAAGCCCGCGCATACCCACTTCATCGACTTGGTGGAGCCCCTGCCACCCATTCT CCCCGAGCACTGGGAGCTGGGACTCAGCGAGTTGGGCGAGACGACGACGCTGCACTGA
Upstream 100 bases:
>100_bases CGAGCGCCTCGTCGGGGACATGGCCGCCAACGTCTCGAAGCTCTCCGGCGTCCACACGGTGGGTGTCCGCTTGGAGCTCG TCTCCCCGTGAGGAAGCCCC
Downstream 100 bases:
>100_bases CGTCCGCCCGGCATGTCCCCGATTTCTCGCGCCATGCCTTTGCACTCCACTGGAGGGCGCAGGCATGAGCAACCGGCTGG ATTTTTTCTTCAGGCAACGT
Product: putative phage tail protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 445; Mature: 444
Protein sequence:
>445_residues MATVELPALYVDTVSLFAETRRPLLLNRAPGPEEEDVPVDAALELEVVDVGVDGIARAATRVWVDGVLAFAGGDSVEVQP AFAGPLAEVTQTADTLRVVLHPAVPLASQATVSVRVVSATAGGEHLLDETYTFTVEDRTAPRLVGAQALAPKSVRLAFDE DVRVPPSARFTFTPRDAPAVPVASVGAAADGPLVHLALDTEMTPDVVYEVLVEGVTDAHDNPVLAPYHRASFAGFRPARP PSRSFQLWDMLPRHNRRDDVTGDLHRFISCLQEVTDLLLSDLDAFPDVFDVERAPEPFLDAILQDLGNPFAFELDVLARR RLAAILVDMYQQKGTALGLRNAIRFFLGIEVRAVSPFASDTLVLGESELGVDWVLGPSERFARYAFNVEVERLLSTAERQ RLRTLVEYLKPAHTHFIDLVEPLPPILPEHWELGLSELGETTTLH
Sequences:
>Translated_445_residues MATVELPALYVDTVSLFAETRRPLLLNRAPGPEEEDVPVDAALELEVVDVGVDGIARAATRVWVDGVLAFAGGDSVEVQP AFAGPLAEVTQTADTLRVVLHPAVPLASQATVSVRVVSATAGGEHLLDETYTFTVEDRTAPRLVGAQALAPKSVRLAFDE DVRVPPSARFTFTPRDAPAVPVASVGAAADGPLVHLALDTEMTPDVVYEVLVEGVTDAHDNPVLAPYHRASFAGFRPARP PSRSFQLWDMLPRHNRRDDVTGDLHRFISCLQEVTDLLLSDLDAFPDVFDVERAPEPFLDAILQDLGNPFAFELDVLARR RLAAILVDMYQQKGTALGLRNAIRFFLGIEVRAVSPFASDTLVLGESELGVDWVLGPSERFARYAFNVEVERLLSTAERQ RLRTLVEYLKPAHTHFIDLVEPLPPILPEHWELGLSELGETTTLH >Mature_444_residues ATVELPALYVDTVSLFAETRRPLLLNRAPGPEEEDVPVDAALELEVVDVGVDGIARAATRVWVDGVLAFAGGDSVEVQPA FAGPLAEVTQTADTLRVVLHPAVPLASQATVSVRVVSATAGGEHLLDETYTFTVEDRTAPRLVGAQALAPKSVRLAFDED VRVPPSARFTFTPRDAPAVPVASVGAAADGPLVHLALDTEMTPDVVYEVLVEGVTDAHDNPVLAPYHRASFAGFRPARPP SRSFQLWDMLPRHNRRDDVTGDLHRFISCLQEVTDLLLSDLDAFPDVFDVERAPEPFLDAILQDLGNPFAFELDVLARRR LAAILVDMYQQKGTALGLRNAIRFFLGIEVRAVSPFASDTLVLGESELGVDWVLGPSERFARYAFNVEVERLLSTAERQR LRTLVEYLKPAHTHFIDLVEPLPPILPEHWELGLSELGETTTLH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48646; Mature: 48515
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATVELPALYVDTVSLFAETRRPLLLNRAPGPEEEDVPVDAALELEVVDVGVDGIARAAT CCCEECCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCEEEEEEEEECCHHHHHHHH RVWVDGVLAFAGGDSVEVQPAFAGPLAEVTQTADTLRVVLHPAVPLASQATVSVRVVSAT HHHHHHEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEC AGGEHLLDETYTFTVEDRTAPRLVGAQALAPKSVRLAFDEDVRVPPSARFTFTPRDAPAV CCCCHHCCCCEEEEECCCCCCHHHCHHHCCCCCEEEEECCCCCCCCCCEEEECCCCCCCC PVASVGAAADGPLVHLALDTEMTPDVVYEVLVEGVTDAHDNPVLAPYHRASFAGFRPARP CHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCEECCCHHCCCCCCCCCCC PSRSFQLWDMLPRHNRRDDVTGDLHRFISCLQEVTDLLLSDLDAFPDVFDVERAPEPFLD CCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHH AILQDLGNPFAFELDVLARRRLAAILVDMYQQKGTALGLRNAIRFFLGIEVRAVSPFASD HHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEEECCCCCC TLVLGESELGVDWVLGPSERFARYAFNVEVERLLSTAERQRLRTLVEYLKPAHTHFIDLV EEEECCCCCCEEEEECCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH EPLPPILPEHWELGLSELGETTTLH HHCCCCCCCHHHCCHHHCCCCCCCC >Mature Secondary Structure ATVELPALYVDTVSLFAETRRPLLLNRAPGPEEEDVPVDAALELEVVDVGVDGIARAAT CCEECCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCEEEEEEEEECCHHHHHHHH RVWVDGVLAFAGGDSVEVQPAFAGPLAEVTQTADTLRVVLHPAVPLASQATVSVRVVSAT HHHHHHEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEC AGGEHLLDETYTFTVEDRTAPRLVGAQALAPKSVRLAFDEDVRVPPSARFTFTPRDAPAV CCCCHHCCCCEEEEECCCCCCHHHCHHHCCCCCEEEEECCCCCCCCCCEEEECCCCCCCC PVASVGAAADGPLVHLALDTEMTPDVVYEVLVEGVTDAHDNPVLAPYHRASFAGFRPARP CHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCEECCCHHCCCCCCCCCCC PSRSFQLWDMLPRHNRRDDVTGDLHRFISCLQEVTDLLLSDLDAFPDVFDVERAPEPFLD CCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHH AILQDLGNPFAFELDVLARRRLAAILVDMYQQKGTALGLRNAIRFFLGIEVRAVSPFASD HHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEEECCCCCC TLVLGESELGVDWVLGPSERFARYAFNVEVERLLSTAERQRLRTLVEYLKPAHTHFIDLV EEEECCCCCCEEEEECCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH EPLPPILPEHWELGLSELGETTTLH HHCCCCCCCHHHCCHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA