| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
Click here to switch to the map view.
The map label for this gene is yxeI [H]
Identifier: 108758199
GI number: 108758199
Start: 6727703
End: 6728773
Strand: Reverse
Name: yxeI [H]
Synonym: MXAN_5407
Alternate gene names: 108758199
Gene position: 6728773-6727703 (Counterclockwise)
Preceding gene: 108757414
Following gene: 108757083
Centisome position: 73.62
GC content: 65.17
Gene sequence:
>1071_bases ATGTGCACTGATTTTCTGGTCGCGACCGAGGACTCGAGCGCTGTCGTCGTTGGCCGCAGCATGGAGTTCGGCATCGACCT CGGCTCCAAGTTCCGGTTCCACGCCAAGGGGCATACGGTCCAGTCTCCGGGTTCCCTCACGCACCTGCATGGCCTCAAGT GGACGACGAAGTTCGACTACGTCGGCCTCACCGTCACGCTCTATGGGGTCACCGTCATCGGCGATGCGATGAACTCGGAA GGCCTCTCCGCCGGAGCGCTGTGGATGCCCACGTCCACGTATCCCCAGGCCGCCAAGGACCCGTCCCGGGGACTGGCGCC CGAGCTCTTCGTGGAGTGGGCCGTGGGTAACTTCGCCACCGTGGACGCGGTGAAGGAGGCCCTGGCGAACGGAGACGCCG AGCTGTGGCACAGCGACTGGATGTCGAGCAAGATTCCGCTCCACTTCGCCCTCCACGACGCGAAGGGCAACAGCATGGTC GTCGAGTTCACCGACCGGCAGATGTTCCTGTACGCGTCGACGGGTCATGACAACTCGCCGCTGAACATGCACAACCCCGT TGCTGTCCTGACCAACCACCCGACCTTCCCGGACCACCTGGAGAACCTCAAGAACTACGCGAGGCTGTCGTCCCGTGGCG CCACGCCCGTGAAGCTGGGAACCGGCACATTCGCACCTCACGGCTGCGGCAGCGGCCTCTTCGGGATTCCCGGCGACTCC ACGCCTCCCTCCCGGTTCGTCCGGGCCGTCTACCTCCGTGAGTTCTCCGAGAAGCCCAAGAACGCGGCCGAGGCCCGCTC CCTGGCGCTGCACCTGCTCAACACCGTCGACATCCCCTACGGCACCAGCCGCGACTTGAACGAGGCCACGGGCAAGGACT CTCTCGACTACACCCAGTGGGTCGTCGTGAAGGACCTCACGAACCGCACGTTCGGCGTCCGGACCTACGACAGCCTGGGG CTGCAGACGCTGGACCTGCGCACGGTCGATTTCAAGAAGGCGGATGGCAAGACGCTCGCCGTCTCCCCGGTGGATTCGCA GCTCGACGCCAACAAGCAGCTGGCGAGCTGA
Upstream 100 bases:
>100_bases CCCGCGAGGCTCAGGTGGCACGCGTCCTGCTCTGGTGACGCACTGCCCCCCCAACACCAGACCTTCGCATGGCGCGAAGG CATCAACGAGGACGTTTCAC
Downstream 100 bases:
>100_bases GTCACTGACTCCCCCTCCGTGGCGCGGGGCCGGGCACCTGGCTGCAAACGGGTACCCGGCCCCGCGTCGTTGGCTTCACT CGGAACGCCGCGCGCCTGGA
Product: choloylglycine hydrolase family protein
Products: 3alpha,7alpha,12alpha-trihydroxy-5beta-cholanate; glycine
Alternate protein names: NA
Number of amino acids: Translated: 356; Mature: 356
Protein sequence:
>356_residues MCTDFLVATEDSSAVVVGRSMEFGIDLGSKFRFHAKGHTVQSPGSLTHLHGLKWTTKFDYVGLTVTLYGVTVIGDAMNSE GLSAGALWMPTSTYPQAAKDPSRGLAPELFVEWAVGNFATVDAVKEALANGDAELWHSDWMSSKIPLHFALHDAKGNSMV VEFTDRQMFLYASTGHDNSPLNMHNPVAVLTNHPTFPDHLENLKNYARLSSRGATPVKLGTGTFAPHGCGSGLFGIPGDS TPPSRFVRAVYLREFSEKPKNAAEARSLALHLLNTVDIPYGTSRDLNEATGKDSLDYTQWVVVKDLTNRTFGVRTYDSLG LQTLDLRTVDFKKADGKTLAVSPVDSQLDANKQLAS
Sequences:
>Translated_356_residues MCTDFLVATEDSSAVVVGRSMEFGIDLGSKFRFHAKGHTVQSPGSLTHLHGLKWTTKFDYVGLTVTLYGVTVIGDAMNSE GLSAGALWMPTSTYPQAAKDPSRGLAPELFVEWAVGNFATVDAVKEALANGDAELWHSDWMSSKIPLHFALHDAKGNSMV VEFTDRQMFLYASTGHDNSPLNMHNPVAVLTNHPTFPDHLENLKNYARLSSRGATPVKLGTGTFAPHGCGSGLFGIPGDS TPPSRFVRAVYLREFSEKPKNAAEARSLALHLLNTVDIPYGTSRDLNEATGKDSLDYTQWVVVKDLTNRTFGVRTYDSLG LQTLDLRTVDFKKADGKTLAVSPVDSQLDANKQLAS >Mature_356_residues MCTDFLVATEDSSAVVVGRSMEFGIDLGSKFRFHAKGHTVQSPGSLTHLHGLKWTTKFDYVGLTVTLYGVTVIGDAMNSE GLSAGALWMPTSTYPQAAKDPSRGLAPELFVEWAVGNFATVDAVKEALANGDAELWHSDWMSSKIPLHFALHDAKGNSMV VEFTDRQMFLYASTGHDNSPLNMHNPVAVLTNHPTFPDHLENLKNYARLSSRGATPVKLGTGTFAPHGCGSGLFGIPGDS TPPSRFVRAVYLREFSEKPKNAAEARSLALHLLNTVDIPYGTSRDLNEATGKDSLDYTQWVVVKDLTNRTFGVRTYDSLG LQTLDLRTVDFKKADGKTLAVSPVDSQLDANKQLAS
Specific function: Unknown
COG id: COG3049
COG function: function code M; Penicillin V acylase and related amidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase C59 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003199 [H]
Pfam domain/function: PF02275 CBAH [H]
EC number: 3.5.1.24
Molecular weight: Translated: 38680; Mature: 38680
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCTDFLVATEDSSAVVVGRSMEFGIDLGSKFRFHAKGHTVQSPGSLTHLHGLKWTTKFDY CCCCEEEEECCCCEEEEECCEEECCCCCCEEEEEECCCEECCCCCEEEECCCEEEEEECE VGLTVTLYGVTVIGDAMNSEGLSAGALWMPTSTYPQAAKDPSRGLAPELFVEWAVGNFAT EEEEEEEEEEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHEEEECCCCCHH VDAVKEALANGDAELWHSDWMSSKIPLHFALHDAKGNSMVVEFTDRQMFLYASTGHDNSP HHHHHHHHHCCCHHHHHHHCCCCCCCEEEEEEECCCCEEEEEEECCEEEEEEECCCCCCC LNMHNPVAVLTNHPTFPDHLENLKNYARLSSRGATPVKLGTGTFAPHGCGSGLFGIPGDS CCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCC TPPSRFVRAVYLREFSEKPKNAAEARSLALHLLNTVDIPYGTSRDLNEATGKDSLDYTQW CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCEEE VVVKDLTNRTFGVRTYDSLGLQTLDLRTVDFKKADGKTLAVSPVDSQLDANKQLAS EEEEECCCCEECEEEHHHCCCEEEEEEEEEEECCCCCEEEECCCCCHHCCCHHCCC >Mature Secondary Structure MCTDFLVATEDSSAVVVGRSMEFGIDLGSKFRFHAKGHTVQSPGSLTHLHGLKWTTKFDY CCCCEEEEECCCCEEEEECCEEECCCCCCEEEEEECCCEECCCCCEEEECCCEEEEEECE VGLTVTLYGVTVIGDAMNSEGLSAGALWMPTSTYPQAAKDPSRGLAPELFVEWAVGNFAT EEEEEEEEEEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHEEEECCCCCHH VDAVKEALANGDAELWHSDWMSSKIPLHFALHDAKGNSMVVEFTDRQMFLYASTGHDNSP HHHHHHHHHCCCHHHHHHHCCCCCCCEEEEEEECCCCEEEEEEECCEEEEEEECCCCCCC LNMHNPVAVLTNHPTFPDHLENLKNYARLSSRGATPVKLGTGTFAPHGCGSGLFGIPGDS CCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCC TPPSRFVRAVYLREFSEKPKNAAEARSLALHLLNTVDIPYGTSRDLNEATGKDSLDYTQW CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCEEE VVVKDLTNRTFGVRTYDSLGLQTLDLRTVDFKKADGKTLAVSPVDSQLDANKQLAS EEEEECCCCEECEEEHHHCCCEEEEEEEEEEECCCCCEEEECCCCCHHCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 3alpha,7alpha,12alpha-trihydroxy-5beta-cholan-24-oylglycine; H2O
Specific reaction: 3alpha,7alpha,12alpha-trihydroxy-5beta-cholan-24-oylglycine + H2O = 3alpha,7alpha,12alpha-trihydroxy-5beta-cholanate + glycine
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8867804; 9384377 [H]