| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108758133
Identifier: 108758133
GI number: 108758133
Start: 5110072
End: 5111760
Strand: Reverse
Name: 108758133
Synonym: MXAN_4160
Alternate gene names: NA
Gene position: 5111760-5110072 (Counterclockwise)
Preceding gene: 108761027
Following gene: 108761386
Centisome position: 55.93
GC content: 71.76
Gene sequence:
>1689_bases GTGGCGGTGGACGCGGGGCGCGTCTACGTTGAGCGCATGACGCATGTGGTTTCCGAGACGTGGACGCTGCCCTGGCGGGG CCTGGGGTTGAGCAGCAATCTGAGCGTGGCGGACGTGCCGCAGCCCTACCGCTTGCTGGATGAGTCACCGGGCCTCTTCG ACTACGTGGAGTACAGCGCGCCGCTCTCCTTGGAAGAGTCGAAGGCGCACGCCTCGCTGTTCCCGGAGATGTGGCGCCGT CGCCAGGACGTCCCGGTGCTCTTCCATCCCGTCCACCTCAACCTCTGGGGCCCCGCGCTGGAGCCCGTCCAGGCCTTGAG GGATTTGGACGCCCACGCGCGCGCGGTGGAGAGCCCCTGGGTGGGCAACGACGTGGGCTGGTGGCACGTGGATGGGCAGC CCTTCCCGGGCTACCTCTACTTCACGCCGCCCTTCAACGAAGCGGGCCTGGAGGCGTGCGTGTCCCACGCGCTCCATGTC CAGCAACACCTGTCCGTGCCGCTCGCGCTGGAGAACCCCGCGGTGCTCGCGCGGCGCGGGCAGTGGCATGTGCTCGACTT CATGGCGAAGCTGCACGCGCGCACCGGGGCGCCGCTGCTGCTCGACCTGGGGCACCTGCTCAGCCATCAACTCTCCGCCG GCCTGCCGCTGCAGACGGGGCTGGACGGCTTTCCGCTCGACCAGGTCATCGAGCTGCACATCGCCGGAGGCGTGGTGACG CACCGGGGGCCGCGCAGCTTCTACGTGGATGACCACACGCAGCCGGTGCGCGAGGAGCTGTTCGACCTGCTGGCCTCGTT GATTCCGCGCTGCCCAGCGCTGCGCGCCGTCACCTTCGAGGGGGATGGCCACCCGCCCGAGGTCGCCCGGATGTCCTTGC GCCGCCTGCGCCAGTGGGTGCCCGCGGGAGCGCGCCCGCCGCTGACGTGGCGCGTCCCGGCGGCTGTCGCGGCCGTGCCT CCACTCACGGAGGACAGCCAGCCCTGGGCCTTGTTCGACGCCGGTTACGCCGCTGCGCCCGCGGCCTCCGTGGAGGACGA AGCGGGCACGCTGGCGGACCAGGACTTCCGCCTGGCCGTGGTCGCGGAGGTCCTGGACCGCGATTGGCCACTCACCCGGT TGTTGCTCGCGGGCACGCGGGAGGGGCTGGCGGCCTTCACCGGCTCGAAGGAGTACCGGAAGCTCTTCGACTCCGTGGCG CGGACGCCCGGTCAGTCCTTCGCGTCCTGGGCCATGCGCCGCCTGCGCGAGTCACCGGATGAGGGGGCATCGGCGGCGCT GACGCTGGAGATGCTGCTGCCGTCGCTGTTCACGCGGCGGGTGCCCGCGCCCGCGCCGGGGCAGGTGGGGTTGATGGAGG ACGTGCGGGTCGGGTCGCTTCCCGTGGACCTGTCCGAGCTGGTCCATTCCGCCCGAGCCGTGCGCCGGCACCTCACGGCC CGTGCGTGGGCGTGTGGCACGTTGGAGCTGTCCGGCCTGGATTCGCTGAACCAGGTGGCGCGCCGGCCGGGCCCGGGGCC CTGGTCCTTCGTCGCTCGGCGCAGGGCAGGAGGACCGGAGGTGATGTCAGTGCCCCCGGCCTTGGGGGAATTCCTGGGAA TGCTCGCTGTGCGGCCCATGGTCGAGGCGGAGGTCGCCCCTGGGTTGTTGGAGGCGGCGAGGGCGCGAGGGCTGATCCGC CAGGGATAG
Upstream 100 bases:
>100_bases GCGTGAGGGGGCGGGCATCGCGGCTCCTGGGGGGGGAAGGGAATCGGCGAGCATACCCGACCTCGGGAGCGCTCATCGCG CCACTGCCCGGCAGTCGCGG
Downstream 100 bases:
>100_bases CGGGAAGAATTGTCCGGGATTGGACCGAACCCTTGCGCTGGTCGTCCTGGTAAGATACGTCGCGCCCACATGGCGTCCCC CCTCGTCGTCGGAATCGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 562; Mature: 561
Protein sequence:
>562_residues MAVDAGRVYVERMTHVVSETWTLPWRGLGLSSNLSVADVPQPYRLLDESPGLFDYVEYSAPLSLEESKAHASLFPEMWRR RQDVPVLFHPVHLNLWGPALEPVQALRDLDAHARAVESPWVGNDVGWWHVDGQPFPGYLYFTPPFNEAGLEACVSHALHV QQHLSVPLALENPAVLARRGQWHVLDFMAKLHARTGAPLLLDLGHLLSHQLSAGLPLQTGLDGFPLDQVIELHIAGGVVT HRGPRSFYVDDHTQPVREELFDLLASLIPRCPALRAVTFEGDGHPPEVARMSLRRLRQWVPAGARPPLTWRVPAAVAAVP PLTEDSQPWALFDAGYAAAPAASVEDEAGTLADQDFRLAVVAEVLDRDWPLTRLLLAGTREGLAAFTGSKEYRKLFDSVA RTPGQSFASWAMRRLRESPDEGASAALTLEMLLPSLFTRRVPAPAPGQVGLMEDVRVGSLPVDLSELVHSARAVRRHLTA RAWACGTLELSGLDSLNQVARRPGPGPWSFVARRRAGGPEVMSVPPALGEFLGMLAVRPMVEAEVAPGLLEAARARGLIR QG
Sequences:
>Translated_562_residues MAVDAGRVYVERMTHVVSETWTLPWRGLGLSSNLSVADVPQPYRLLDESPGLFDYVEYSAPLSLEESKAHASLFPEMWRR RQDVPVLFHPVHLNLWGPALEPVQALRDLDAHARAVESPWVGNDVGWWHVDGQPFPGYLYFTPPFNEAGLEACVSHALHV QQHLSVPLALENPAVLARRGQWHVLDFMAKLHARTGAPLLLDLGHLLSHQLSAGLPLQTGLDGFPLDQVIELHIAGGVVT HRGPRSFYVDDHTQPVREELFDLLASLIPRCPALRAVTFEGDGHPPEVARMSLRRLRQWVPAGARPPLTWRVPAAVAAVP PLTEDSQPWALFDAGYAAAPAASVEDEAGTLADQDFRLAVVAEVLDRDWPLTRLLLAGTREGLAAFTGSKEYRKLFDSVA RTPGQSFASWAMRRLRESPDEGASAALTLEMLLPSLFTRRVPAPAPGQVGLMEDVRVGSLPVDLSELVHSARAVRRHLTA RAWACGTLELSGLDSLNQVARRPGPGPWSFVARRRAGGPEVMSVPPALGEFLGMLAVRPMVEAEVAPGLLEAARARGLIR QG >Mature_561_residues AVDAGRVYVERMTHVVSETWTLPWRGLGLSSNLSVADVPQPYRLLDESPGLFDYVEYSAPLSLEESKAHASLFPEMWRRR QDVPVLFHPVHLNLWGPALEPVQALRDLDAHARAVESPWVGNDVGWWHVDGQPFPGYLYFTPPFNEAGLEACVSHALHVQ QHLSVPLALENPAVLARRGQWHVLDFMAKLHARTGAPLLLDLGHLLSHQLSAGLPLQTGLDGFPLDQVIELHIAGGVVTH RGPRSFYVDDHTQPVREELFDLLASLIPRCPALRAVTFEGDGHPPEVARMSLRRLRQWVPAGARPPLTWRVPAAVAAVPP LTEDSQPWALFDAGYAAAPAASVEDEAGTLADQDFRLAVVAEVLDRDWPLTRLLLAGTREGLAAFTGSKEYRKLFDSVAR TPGQSFASWAMRRLRESPDEGASAALTLEMLLPSLFTRRVPAPAPGQVGLMEDVRVGSLPVDLSELVHSARAVRRHLTAR AWACGTLELSGLDSLNQVARRPGPGPWSFVARRRAGGPEVMSVPPALGEFLGMLAVRPMVEAEVAPGLLEAARARGLIRQ G
Specific function: Unknown
COG id: COG3220
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0276 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007801 - InterPro: IPR013022 [H]
Pfam domain/function: PF05114 DUF692 [H]
EC number: NA
Molecular weight: Translated: 61494; Mature: 61363
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVDAGRVYVERMTHVVSETWTLPWRGLGLSSNLSVADVPQPYRLLDESPGLFDYVEYSA CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHCCC PLSLEESKAHASLFPEMWRRRQDVPVLFHPVHLNLWGPALEPVQALRDLDAHARAVESPW CCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCC VGNDVGWWHVDGQPFPGYLYFTPPFNEAGLEACVSHALHVQQHLSVPLALENPAVLARRG CCCCCCEEEECCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHCCC QWHVLDFMAKLHARTGAPLLLDLGHLLSHQLSAGLPLQTGLDGFPLDQVIELHIAGGVVT CHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHCCCCCCCHHHHHHHHCCCCEEE HRGPRSFYVDDHTQPVREELFDLLASLIPRCPALRAVTFEGDGHPPEVARMSLRRLRQWV CCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHC PAGARPPLTWRVPAAVAAVPPLTEDSQPWALFDAGYAAAPAASVEDEAGTLADQDFRLAV CCCCCCCEEEECCHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHH VAEVLDRDWPLTRLLLAGTREGLAAFTGSKEYRKLFDSVARTPGQSFASWAMRRLRESPD HHHHHCCCCCHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC EGASAALTLEMLLPSLFTRRVPAPAPGQVGLMEDVRVGSLPVDLSELVHSARAVRRHLTA CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHH RAWACGTLELSGLDSLNQVARRPGPGPWSFVARRRAGGPEVMSVPPALGEFLGMLAVRPM HHHCCCCEEECCCCHHHHHHHCCCCCCHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHH VEAEVAPGLLEAARARGLIRQG HHHHHCCHHHHHHHHCCHHCCC >Mature Secondary Structure AVDAGRVYVERMTHVVSETWTLPWRGLGLSSNLSVADVPQPYRLLDESPGLFDYVEYSA CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHCCC PLSLEESKAHASLFPEMWRRRQDVPVLFHPVHLNLWGPALEPVQALRDLDAHARAVESPW CCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCC VGNDVGWWHVDGQPFPGYLYFTPPFNEAGLEACVSHALHVQQHLSVPLALENPAVLARRG CCCCCCEEEECCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHCCC QWHVLDFMAKLHARTGAPLLLDLGHLLSHQLSAGLPLQTGLDGFPLDQVIELHIAGGVVT CHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHCCCCCCCHHHHHHHHCCCCEEE HRGPRSFYVDDHTQPVREELFDLLASLIPRCPALRAVTFEGDGHPPEVARMSLRRLRQWV CCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHC PAGARPPLTWRVPAAVAAVPPLTEDSQPWALFDAGYAAAPAASVEDEAGTLADQDFRLAV CCCCCCCEEEECCHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHH VAEVLDRDWPLTRLLLAGTREGLAAFTGSKEYRKLFDSVARTPGQSFASWAMRRLRESPD HHHHHCCCCCHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC EGASAALTLEMLLPSLFTRRVPAPAPGQVGLMEDVRVGSLPVDLSELVHSARAVRRHLTA CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHH RAWACGTLELSGLDSLNQVARRPGPGPWSFVARRRAGGPEVMSVPPALGEFLGMLAVRPM HHHCCCCEEECCCCHHHHHHHCCCCCCHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHH VEAEVAPGLLEAARARGLIRQG HHHHHCCHHHHHHHHCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11259647 [H]