| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108758049
Identifier: 108758049
GI number: 108758049
Start: 6754798
End: 6755874
Strand: Direct
Name: 108758049
Synonym: MXAN_5425
Alternate gene names: NA
Gene position: 6754798-6755874 (Clockwise)
Preceding gene: 108757030
Following gene: 108763625
Centisome position: 73.91
GC content: 68.25
Gene sequence:
>1077_bases ATGACGGGCCGGGGCATCGACCAGGTCCTGCCCCACCCTGCTCCGCCGGGCCTCCACGAGGACTACCTGAAGGATGCGCG GGACTACGTCCGGCTGGCAGAGGAACGCAATGGCCCCATCCGGACGCCCGTCGGCTTCGGTGAGCTCTGGGGTGACGCGC TCGACGAGATGGAGCGAGCCGCGCCGGATGTTCGAATCATCAACCTGGAGACGAGCGTCACCACAAGCGAGGCGTGGTGG CCAGACAAGGGCATCCATTATCGCATGCACCCGGAGAACGCGGCTTGCCTTACAGCCGCCCGAATCGATTGCTGCGCGCT GGCGAACAACCACGTGCTGGACTGGGGCTATCCGGGGCTCCTCGAAACGCTGGCGACCCTCCGGTGCCTGGGCATCGCCA CCGCGGGGCTCGGGGAGGACCAGGAGCGAGCACGGCGGCCGGCCATCCTGGATGTGACCGGGGGCCGGGTCACCGTGTTT TCGTTCGGTGATAGCAGCAGCGGAATCCCACCCGTCTGGGCCGCGACGGAAGACCGGCCCGGCGTGGATCTGCTGCCAGC GCTGTCACCCACCGCAGTGCGGCAACTGGGCGAGCGCGTCGCGGCCGTCAAACGCACGGGCGACATCGTCGTTGCCTCCA TTCACTGGGGCGGCAACTGGGGCTATGCAGTGCCGGACGCGCAGCGGGCCTTCGCGCGAGCGCTCATCGATGAGGCCGGC GTCGACATCATCCATGGCCACTCGTCACACCACCCCCGCGGCATCGAGGTCCACCGGGGCCACCTCATCCTCTACGGCTG CGGAGACTTCCTGAACGACTATGAGGGAATCTCTGGCCACACGGCCTTCCGTCCGGACCTGACGCTGCTGTACCTGGCGT CCATCGCCCCGGCCACCGGTCAGCTGACGGGCCTCCGCATGCTCCCGATGCAGCTGCGCCAACTCCGTCCCCATCATGCT TCACGACAGGACGCTGAGTGGCTGGGCGGCGTCCTGGACCGGCAGGGGCGGGACCTTGGGACCCGCACGCGGCTGGCATC AGACGGCAACGGTGCGCTCGTCCTTCAGTGGACGTGA
Upstream 100 bases:
>100_bases CACGATGATTCCGGATACGCCAGACAGGGAGCGAAGCGCCAATGGCTCGACGCCTTCGGCCTCGGGGAAGGTGCTCACCC TCCTGCTATGCGGAGATGTG
Downstream 100 bases:
>100_bases GCCTCCCAGACAAGCGACGAGCGGCCTCAGGGCCCCTGGTTCCCCCGCACGGCGGCGGAACCTCCTTGGACGCGGTGAGC GCACGCCTCCGGCCCAATGC
Product: CapA family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 358; Mature: 357
Protein sequence:
>358_residues MTGRGIDQVLPHPAPPGLHEDYLKDARDYVRLAEERNGPIRTPVGFGELWGDALDEMERAAPDVRIINLETSVTTSEAWW PDKGIHYRMHPENAACLTAARIDCCALANNHVLDWGYPGLLETLATLRCLGIATAGLGEDQERARRPAILDVTGGRVTVF SFGDSSSGIPPVWAATEDRPGVDLLPALSPTAVRQLGERVAAVKRTGDIVVASIHWGGNWGYAVPDAQRAFARALIDEAG VDIIHGHSSHHPRGIEVHRGHLILYGCGDFLNDYEGISGHTAFRPDLTLLYLASIAPATGQLTGLRMLPMQLRQLRPHHA SRQDAEWLGGVLDRQGRDLGTRTRLASDGNGALVLQWT
Sequences:
>Translated_358_residues MTGRGIDQVLPHPAPPGLHEDYLKDARDYVRLAEERNGPIRTPVGFGELWGDALDEMERAAPDVRIINLETSVTTSEAWW PDKGIHYRMHPENAACLTAARIDCCALANNHVLDWGYPGLLETLATLRCLGIATAGLGEDQERARRPAILDVTGGRVTVF SFGDSSSGIPPVWAATEDRPGVDLLPALSPTAVRQLGERVAAVKRTGDIVVASIHWGGNWGYAVPDAQRAFARALIDEAG VDIIHGHSSHHPRGIEVHRGHLILYGCGDFLNDYEGISGHTAFRPDLTLLYLASIAPATGQLTGLRMLPMQLRQLRPHHA SRQDAEWLGGVLDRQGRDLGTRTRLASDGNGALVLQWT >Mature_357_residues TGRGIDQVLPHPAPPGLHEDYLKDARDYVRLAEERNGPIRTPVGFGELWGDALDEMERAAPDVRIINLETSVTTSEAWWP DKGIHYRMHPENAACLTAARIDCCALANNHVLDWGYPGLLETLATLRCLGIATAGLGEDQERARRPAILDVTGGRVTVFS FGDSSSGIPPVWAATEDRPGVDLLPALSPTAVRQLGERVAAVKRTGDIVVASIHWGGNWGYAVPDAQRAFARALIDEAGV DIIHGHSSHHPRGIEVHRGHLILYGCGDFLNDYEGISGHTAFRPDLTLLYLASIAPATGQLTGLRMLPMQLRQLRPHHAS RQDAEWLGGVLDRQGRDLGTRTRLASDGNGALVLQWT
Specific function: Could be involved in the biosynthesis of a cell wall component (Potential) [H]
COG id: COG2843
COG function: function code M; Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CapA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019079 [H]
Pfam domain/function: PF09587 PGA_cap [H]
EC number: NA
Molecular weight: Translated: 38969; Mature: 38838
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGRGIDQVLPHPAPPGLHEDYLKDARDYVRLAEERNGPIRTPVGFGELWGDALDEMERA CCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHC APDVRIINLETSVTTSEAWWPDKGIHYRMHPENAACLTAARIDCCALANNHVLDWGYPGL CCCEEEEEEECCCCCCCCCCCCCCCEEEECCCCCEEEHHHHHHHEECCCCCEEECCCHHH LETLATLRCLGIATAGLGEDQERARRPAILDVTGGRVTVFSFGDSSSGIPPVWAATEDRP HHHHHHHHHHHHHHCCCCCCHHHHCCCEEEEECCCEEEEEEECCCCCCCCCEEECCCCCC GVDLLPALSPTAVRQLGERVAAVKRTGDIVVASIHWGGNWGYAVPDAQRAFARALIDEAG CCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCC VDIIHGHSSHHPRGIEVHRGHLILYGCGDFLNDYEGISGHTAFRPDLTLLYLASIAPATG CEEEECCCCCCCCCEEEECCEEEEEECCHHHHHCCCCCCCCEECCCHHEEEHHHCCCCCC QLTGLRMLPMQLRQLRPHHASRQDAEWLGGVLDRQGRDLGTRTRLASDGNGALVLQWT CCCCEEEHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCHHEECCCCCCEEEEEEC >Mature Secondary Structure TGRGIDQVLPHPAPPGLHEDYLKDARDYVRLAEERNGPIRTPVGFGELWGDALDEMERA CCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHC APDVRIINLETSVTTSEAWWPDKGIHYRMHPENAACLTAARIDCCALANNHVLDWGYPGL CCCEEEEEEECCCCCCCCCCCCCCCEEEECCCCCEEEHHHHHHHEECCCCCEEECCCHHH LETLATLRCLGIATAGLGEDQERARRPAILDVTGGRVTVFSFGDSSSGIPPVWAATEDRP HHHHHHHHHHHHHHCCCCCCHHHHCCCEEEEECCCEEEEEEECCCCCCCCCEEECCCCCC GVDLLPALSPTAVRQLGERVAAVKRTGDIVVASIHWGGNWGYAVPDAQRAFARALIDEAG CCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCC VDIIHGHSSHHPRGIEVHRGHLILYGCGDFLNDYEGISGHTAFRPDLTLLYLASIAPATG CEEEECCCCCCCCCEEEECCEEEEEECCHHHHHCCCCCCCCEECCCHHEEEHHHCCCCCC QLTGLRMLPMQLRQLRPHHASRQDAEWLGGVLDRQGRDLGTRTRLASDGNGALVLQWT CCCCEEEHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCHHEECCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]