| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is macB [H]
Identifier: 108758008
GI number: 108758008
Start: 792635
End: 795082
Strand: Reverse
Name: macB [H]
Synonym: MXAN_0696
Alternate gene names: 108758008
Gene position: 795082-792635 (Counterclockwise)
Preceding gene: 108762924
Following gene: 108762473
Centisome position: 8.7
GC content: 70.83
Gene sequence:
>2448_bases ATGGCCCGTATCGCCGACGGAGTGGGGGACATCGCGAGCGACTTCAAGTTCGCGGTGCGGATGCTCCGGAAGGACCCGGT CTTCACGCTGGTGGCCGTGCTGTGTCTGGCATTTGGGATTGGCGCCAACGCGGCCATCTTCAGCGTGGTGGATGCGGTGC TGCTCCGCCCGCTGCCCTACCACGAGCCAGGGCAGCTCGTTCGCCTCTTCGAGACGACACCAGCGCGGGACCCGACGTGG CTGGGCTCGGTGTCATGGCCCAATTACCAGGACTGGTCCACCCAGCTCCCCTCGCTGGAAGGCGTGGCCGCCTACGAGTT CCAGGGCCGCAACCTGATGACGCCCGAGGGCGCGGAGCGGGTGAGCGTGGTAGCGGCCACGGCCAACCTCTTCCAGCTCC TGGGCACTTCGCCCAAGCTGGGCCCCGGCTTCGCGCCCGGAGATGACCAGCCCGGGGCCGCGCCCGTCGTCGTCATCGGA GAGGGCCTGTGGCAACGCCGCTTCGGAGCCGACCCGGGCCTCGTCGGACGCACGCTGACGCTGGACGGACAGCCGCACAC CGTGGTGGGCATCCTGCCCACGGCGGTGGGCTTTCCCGCGGGGGCCCGGATGGAGGTCTTCATCCCCTTCGTCCCCTCCG CTGACCGGGTGGACAACCGGGGCTCGCACTTCCTGAGTGTCCTCGGTCGGCTGCGCCCGGGGGTCCCGCCCCAGACGCTC GCCGCGGAGCTGAAGGAAGTGGCGCGCCGCATCGAGGAAGCGCACCCCGCGCAGCAAGCCGGGCGGAGCGCCGCGGCGGT GTCCCTGGCGGAGACGGTGACGGGCAACGTGCGGCCCACGCTGCTGCTCCTGCAGGGCGCGGTGCTGCTGGTGCTGCTCA TCGCATGCGCCAACGTGGCCAACCTGCTGCTCGCCCGGACCGCCACGCGGCAGCAGGAGATTGCCGTCCGCTTCGCACTG GGCGCGAGCCGGGGCCACATCGTGAGGCAGCTCCTGGTGGAGAGCCTGCTGCTGTCGCTGCTGGGCGCGCTGCTGGGCGT GCTCCTGGGCGCCTGGGGTGTGAACACCATGGGCAACCTGGTCCGGGCGTCCTTCCCACTCACCGGGGACCTTCCCCTCA ATGGGCGGGTCCTCGGCTTCCTCCTGCTGATATCCGTGGGAAGCGCGCTCACCTTCGGCCTGACACCGGCGCTCCAGGCC ACGCGCACGCCGCTGCGCGCCAGCCTCGCCGAGCCAGGGGCCAAGCAGTCTCCGTCGCGCGCGCACCACTACTTTCGCGG CGCGCTCGTCGTGACGGAGGTGGCCCTGTCGTTGGTGCTGCTCGTCGGAGCGGGGCTGCTGCTGCGAGGCTTCGTGACGT TGCTGGGCACCGAGCCCGGGCTGGAGCCGCGCCACGTCCTCACCGCCCACCTGCCCATCACCCCGAACCAGTACCCCCGG GAGGAGGTCGTCGAGCGCCTCTTCCAGCCCATCCTGGAGAAGGCCCGGACGCTCCCGGGCGTGGAGTCCGCGGCGCTCAT CTCCCTCCTACCCATCCAGACGGCGTGGACCAGCGGGGACTACGCCGTGGAGGGAGAGCTGCCGGCGGAGCCAGGCAAGA CGCTGTTCGCGGAGTTCAGGACGACCAGCCCGGACCTGTTCAAGTCGCTGGGGATACCGTTGCTGGCCGGCCGCGACTTC ACCGAGGACGACGGCCGGAGCGCCGAGCAGGTCGTCATCGTCAACCAGGCCCTCGCCCGCCGGCACTTCGCGGGAAGCGA GGCCGTGGGACGCCGGCTGCTCATCGGGGGCCAGCCCGTGGAAATCATCGGCGTGGTGGGAGACGTGCGGCAGGCGGGCC TGGACCAGCAGCCCCTCCCCGAGGTCCACCTCCCCTACAACCATCCGCGCTCCACGCTCTGGTACTTCCAAGCGGTGACG CTGGTGCTCAAGACACGCACGGCGCCCGCTAGCGTGGCGGCCACGCTGCGCGGCGCGGTGCGCGCCGTGGACTCCGAGCA GCCGCTCTACAACATCATGACCATGGAGGAGATCATCCAGCAGTCCGTGGCGGGGCGGCGCCTCAGCCTCACGCTCCTGG GCGCGTTCGCGCTCATCGCCCTGGTGCTGGCCACCGCGGGCCTCTACGGCGTCATCTCCTACCTCGTCTCGCAACGCACC CAGGAGATTGGCATCCGCATGGCGCTTGGGGCGCCTCCGGGCCGGGTGGTGCGGCTGGTCATGGACCAGGGCATGAAGAT GGCGGGATTGGGAATCGGCGTGGGGCTCGTCGCCGCCTTCGGACTGTCCCGCTACATGGAAAGCCTGCTGTACGGCGTCA GCGGGACGGACCCACTGACCTTCGGCGTGTTCGCCGTGTTGCTGGGCGGCGTGGCGCTGCTGGCCACCTGGCTGCCCGCG CGCCGCGCCTCCCGCGTGGACCCCATCATCGCCATCCAGAAGCGATGA
Upstream 100 bases:
>100_bases GACGCGCCCATCCCCTCCAAGGCCTGACCACCGTCACCTCCGGGCCTGGGTTCATTGCCGGGTGAGCTGTTTTTGCTAGG CTTACCCGCGCGAGGTGGAC
Downstream 100 bases:
>100_bases CGGGGCGCTGTCCCTCGCGCCCGGGGTCTCCAGGAGCGAGGGACACGGACGTCCGGCCTCATGACGCTTCGCGCAGCGCT GTCAGCTCCTCCACGTCCTC
Product: putative permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 815; Mature: 814
Protein sequence:
>815_residues MARIADGVGDIASDFKFAVRMLRKDPVFTLVAVLCLAFGIGANAAIFSVVDAVLLRPLPYHEPGQLVRLFETTPARDPTW LGSVSWPNYQDWSTQLPSLEGVAAYEFQGRNLMTPEGAERVSVVAATANLFQLLGTSPKLGPGFAPGDDQPGAAPVVVIG EGLWQRRFGADPGLVGRTLTLDGQPHTVVGILPTAVGFPAGARMEVFIPFVPSADRVDNRGSHFLSVLGRLRPGVPPQTL AAELKEVARRIEEAHPAQQAGRSAAAVSLAETVTGNVRPTLLLLQGAVLLVLLIACANVANLLLARTATRQQEIAVRFAL GASRGHIVRQLLVESLLLSLLGALLGVLLGAWGVNTMGNLVRASFPLTGDLPLNGRVLGFLLLISVGSALTFGLTPALQA TRTPLRASLAEPGAKQSPSRAHHYFRGALVVTEVALSLVLLVGAGLLLRGFVTLLGTEPGLEPRHVLTAHLPITPNQYPR EEVVERLFQPILEKARTLPGVESAALISLLPIQTAWTSGDYAVEGELPAEPGKTLFAEFRTTSPDLFKSLGIPLLAGRDF TEDDGRSAEQVVIVNQALARRHFAGSEAVGRRLLIGGQPVEIIGVVGDVRQAGLDQQPLPEVHLPYNHPRSTLWYFQAVT LVLKTRTAPASVAATLRGAVRAVDSEQPLYNIMTMEEIIQQSVAGRRLSLTLLGAFALIALVLATAGLYGVISYLVSQRT QEIGIRMALGAPPGRVVRLVMDQGMKMAGLGIGVGLVAAFGLSRYMESLLYGVSGTDPLTFGVFAVLLGGVALLATWLPA RRASRVDPIIAIQKR
Sequences:
>Translated_815_residues MARIADGVGDIASDFKFAVRMLRKDPVFTLVAVLCLAFGIGANAAIFSVVDAVLLRPLPYHEPGQLVRLFETTPARDPTW LGSVSWPNYQDWSTQLPSLEGVAAYEFQGRNLMTPEGAERVSVVAATANLFQLLGTSPKLGPGFAPGDDQPGAAPVVVIG EGLWQRRFGADPGLVGRTLTLDGQPHTVVGILPTAVGFPAGARMEVFIPFVPSADRVDNRGSHFLSVLGRLRPGVPPQTL AAELKEVARRIEEAHPAQQAGRSAAAVSLAETVTGNVRPTLLLLQGAVLLVLLIACANVANLLLARTATRQQEIAVRFAL GASRGHIVRQLLVESLLLSLLGALLGVLLGAWGVNTMGNLVRASFPLTGDLPLNGRVLGFLLLISVGSALTFGLTPALQA TRTPLRASLAEPGAKQSPSRAHHYFRGALVVTEVALSLVLLVGAGLLLRGFVTLLGTEPGLEPRHVLTAHLPITPNQYPR EEVVERLFQPILEKARTLPGVESAALISLLPIQTAWTSGDYAVEGELPAEPGKTLFAEFRTTSPDLFKSLGIPLLAGRDF TEDDGRSAEQVVIVNQALARRHFAGSEAVGRRLLIGGQPVEIIGVVGDVRQAGLDQQPLPEVHLPYNHPRSTLWYFQAVT LVLKTRTAPASVAATLRGAVRAVDSEQPLYNIMTMEEIIQQSVAGRRLSLTLLGAFALIALVLATAGLYGVISYLVSQRT QEIGIRMALGAPPGRVVRLVMDQGMKMAGLGIGVGLVAAFGLSRYMESLLYGVSGTDPLTFGVFAVLLGGVALLATWLPA RRASRVDPIIAIQKR >Mature_814_residues ARIADGVGDIASDFKFAVRMLRKDPVFTLVAVLCLAFGIGANAAIFSVVDAVLLRPLPYHEPGQLVRLFETTPARDPTWL GSVSWPNYQDWSTQLPSLEGVAAYEFQGRNLMTPEGAERVSVVAATANLFQLLGTSPKLGPGFAPGDDQPGAAPVVVIGE GLWQRRFGADPGLVGRTLTLDGQPHTVVGILPTAVGFPAGARMEVFIPFVPSADRVDNRGSHFLSVLGRLRPGVPPQTLA AELKEVARRIEEAHPAQQAGRSAAAVSLAETVTGNVRPTLLLLQGAVLLVLLIACANVANLLLARTATRQQEIAVRFALG ASRGHIVRQLLVESLLLSLLGALLGVLLGAWGVNTMGNLVRASFPLTGDLPLNGRVLGFLLLISVGSALTFGLTPALQAT RTPLRASLAEPGAKQSPSRAHHYFRGALVVTEVALSLVLLVGAGLLLRGFVTLLGTEPGLEPRHVLTAHLPITPNQYPRE EVVERLFQPILEKARTLPGVESAALISLLPIQTAWTSGDYAVEGELPAEPGKTLFAEFRTTSPDLFKSLGIPLLAGRDFT EDDGRSAEQVVIVNQALARRHFAGSEAVGRRLLIGGQPVEIIGVVGDVRQAGLDQQPLPEVHLPYNHPRSTLWYFQAVTL VLKTRTAPASVAATLRGAVRAVDSEQPLYNIMTMEEIIQQSVAGRRLSLTLLGAFALIALVLATAGLYGVISYLVSQRTQ EIGIRMALGAPPGRVVRLVMDQGMKMAGLGIGVGLVAAFGLSRYMESLLYGVSGTDPLTFGVFAVLLGGVALLATWLPAR RASRVDPIIAIQKR
Specific function: Part of the ABC transporter complex MacAB involved in macrolide export. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation [H]
COG id: COG0577
COG function: function code V; ABC-type antimicrobial peptide transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Escherichia coli, GI1787105, Length=284, Percent_Identity=27.4647887323944, Blast_Score=85, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR017911 - InterPro: IPR003593 - InterPro: IPR003838 [H]
Pfam domain/function: PF00005 ABC_tran; PF02687 FtsX [H]
EC number: NA
Molecular weight: Translated: 86662; Mature: 86531
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARIADGVGDIASDFKFAVRMLRKDPVFTLVAVLCLAFGIGANAAIFSVVDAVLLRPLPY CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCC HEPGQLVRLFETTPARDPTWLGSVSWPNYQDWSTQLPSLEGVAAYEFQGRNLMTPEGAER CCCCCEEEEEECCCCCCCCEECCCCCCCCCCHHCCCCCCCCCEEEEECCCCCCCCCCCCH VSVVAATANLFQLLGTSPKLGPGFAPGDDQPGAAPVVVIGEGLWQRRFGADPGLVGRTLT HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHCCCCCCCCCEEEE LDGQPHTVVGILPTAVGFPAGARMEVFIPFVPSADRVDNRGSHFLSVLGRLRPGVPPQTL ECCCCCEEEEEEHHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCHHHH AAELKEVARRIEEAHPAQQAGRSAAAVSLAETVTGNVRPTLLLLQGAVLLVLLIACANVA HHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH NLLLARTATRQQEIAVRFALGASRGHIVRQLLVESLLLSLLGALLGVLLGAWGVNTMGNL HHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH VRASFPLTGDLPLNGRVLGFLLLISVGSALTFGLTPALQATRTPLRASLAEPGAKQSPSR HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHCCCCCCCCCHH AHHYFRGALVVTEVALSLVLLVGAGLLLRGFVTLLGTEPGLEPRHVLTAHLPITPNQYPR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCH EEVVERLFQPILEKARTLPGVESAALISLLPIQTAWTSGDYAVEGELPAEPGKTLFAEFR HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHEEECCCCEEEECCCCCCCCCHHHHHHC TTSPDLFKSLGIPLLAGRDFTEDDGRSAEQVVIVNQALARRHFAGSEAVGRRLLIGGQPV CCCHHHHHHCCCCEEECCCCCCCCCCCCCEEEEHHHHHHHHHCCCCHHHCCEEEECCCCE EIIGVVGDVRQAGLDQQPLPEVHLPYNHPRSTLWYFQAVTLVLKTRTAPASVAATLRGAV EEEEEHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH RAVDSEQPLYNIMTMEEIIQQSVAGRRLSLTLLGAFALIALVLATAGLYGVISYLVSQRT HHCCCCCCHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QEIGIRMALGAPPGRVVRLVMDQGMKMAGLGIGVGLVAAFGLSRYMESLLYGVSGTDPLT HHCCEEEEECCCHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH FGVFAVLLGGVALLATWLPARRASRVDPIIAIQKR HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECC >Mature Secondary Structure ARIADGVGDIASDFKFAVRMLRKDPVFTLVAVLCLAFGIGANAAIFSVVDAVLLRPLPY CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCC HEPGQLVRLFETTPARDPTWLGSVSWPNYQDWSTQLPSLEGVAAYEFQGRNLMTPEGAER CCCCCEEEEEECCCCCCCCEECCCCCCCCCCHHCCCCCCCCCEEEEECCCCCCCCCCCCH VSVVAATANLFQLLGTSPKLGPGFAPGDDQPGAAPVVVIGEGLWQRRFGADPGLVGRTLT HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHCCCCCCCCCEEEE LDGQPHTVVGILPTAVGFPAGARMEVFIPFVPSADRVDNRGSHFLSVLGRLRPGVPPQTL ECCCCCEEEEEEHHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCHHHH AAELKEVARRIEEAHPAQQAGRSAAAVSLAETVTGNVRPTLLLLQGAVLLVLLIACANVA HHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH NLLLARTATRQQEIAVRFALGASRGHIVRQLLVESLLLSLLGALLGVLLGAWGVNTMGNL HHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH VRASFPLTGDLPLNGRVLGFLLLISVGSALTFGLTPALQATRTPLRASLAEPGAKQSPSR HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHCCCCCCCCCHH AHHYFRGALVVTEVALSLVLLVGAGLLLRGFVTLLGTEPGLEPRHVLTAHLPITPNQYPR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCH EEVVERLFQPILEKARTLPGVESAALISLLPIQTAWTSGDYAVEGELPAEPGKTLFAEFR HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHEEECCCCEEEECCCCCCCCCHHHHHHC TTSPDLFKSLGIPLLAGRDFTEDDGRSAEQVVIVNQALARRHFAGSEAVGRRLLIGGQPV CCCHHHHHHCCCCEEECCCCCCCCCCCCCEEEEHHHHHHHHHCCCCHHHCCEEEECCCCE EIIGVVGDVRQAGLDQQPLPEVHLPYNHPRSTLWYFQAVTLVLKTRTAPASVAATLRGAV EEEEEHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH RAVDSEQPLYNIMTMEEIIQQSVAGRRLSLTLLGAFALIALVLATAGLYGVISYLVSQRT HHCCCCCCHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QEIGIRMALGAPPGRVVRLVMDQGMKMAGLGIGVGLVAAFGLSRYMESLLYGVSGTDPLT HHCCEEEEECCCHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH FGVFAVLLGGVALLATWLPARRASRVDPIIAIQKR HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 14500782 [H]