Definition Myxococcus xanthus DK 1622 chromosome, complete genome.
Accession NC_008095
Length 9,139,763

Click here to switch to the map view.

The map label for this gene is 108757913

Identifier: 108757913

GI number: 108757913

Start: 1887344

End: 1889431

Strand: Direct

Name: 108757913

Synonym: MXAN_1604

Alternate gene names: NA

Gene position: 1887344-1889431 (Clockwise)

Preceding gene: 108757494

Following gene: 108762805

Centisome position: 20.65

GC content: 72.08

Gene sequence:

>2088_bases
GTGTCTTGTCCGGGCATGGCACCGGACCGAGGAGTCTGCGTGACGCTGTGGTCGCTCACTGTTCAAGGTGTGCTGGCCCG
CCCCCGAAGCTGGGTGGTGGGGCTGCTGGCGGCAGGCGCGGCGGCGCTGCTGACGCCGGGTGTGTCGTTGATGGGTAGCA
TCCATGACGGCACGCGGCGAAGTCTCATCGAGAGCGGCGCGGGGGACCTCCAGGTCTACGCCGCCGCCTCCACGGGAACG
CCCCAGGTCGTGGTGGGGCCAGGGGGCGTCCCGGACCTGCAACCCATTCCGGACTACGGCGCCCTGGAGCCGCGGCTGCG
CGACCTCCCCGGCATCCAGGAGGTGGTGCCGCTGGAGCTGGGCATGGGCGCTGTGTTCCGTGGCAACGCCCTGGATGAAA
AGCTGGCGGTGTTGCGCGAGGCGGCGCGGGCGCCGGCCTCCGAGGAACGGGACGCACGGCTGCGCCGTCTGGGCGAGGAC
CTGCGGCTGACGCTGGCGCGGGTGGCGCGCAACGCGGATCGCCGGAGCGAGGCCTTCGCGGAAGAGCCCGCCTTCGCGGA
TGACCTGCGCGTGCTGCGGGACGCGGCCGAGCCCGCCTTCTGGGAGCGGCTCACCGAGGACCCACAGGGCCTGCTGGAGG
TGTTGGAGAACCGCGTGGCGCGGCAAGCGGGCGAGGGTGAAGAGCTTCCGGTGGACTACCTGGGCACGGACGTGGCGCGC
TTCGCCCGGGCCTTCCCGCGCTTCGAGCTCGTCTCCGGGCAGCTTCCTCCGCCAGGGACGCGGGGCCTCGTCATGGGGCA
CGCGACGTACGAGCAGCACTTCAAGCACCCCATCGCCGTGCGCATGGACACGCTGCGCCGCGAGCGCGAGCGGGGCCTCA
CGTTGGCGGAGGACGAGCAGCTGCGCACGCTGGTGGAGCGCAACGTCGCGGAGGTGCCGGACCTGGTGGCTCGCCTGGAC
ATCGAGCGCGCCACGGCGCTCCAGGCCGGACTGGCCCGCGTGCTGGGCGAGCCGGGCGAACTGGAGGCCCTGCTGGCGCG
CTTCCTCTCGGTGGACGACGCCAACTTCGACACCCGCTTCGGACAGTTCTACGGGGAGCTGGCGCCCTCGCTGCCGCTGT
ACCGGCTCAAGCCCGGGGACGTGCTGTCACTGAAGACGCCGCTGGAGAGTGGCACCGCCGTGCCAGTGCGAGTCTTCGGC
ATCTTCCGCTTCCGGGGCCTGGGCGGCGACGACGGCCGGGTCAACACCATGAGCGTGGTGGACCTCGTCACGGCGCGGCA
CCTGTCTGGCCGCTTCACCCAGGCACAGCAGGACGAGGCGCGGGCGCTGTTCGAGACCTTTGGCATGGAAGGGGAGGCCA
TGGCGCCCCCCGAGTCCCTGGACGCCTTCCATCCGCCTGACATCGTGGACGCGGAGGCGCAGACGGCGCACACCGAACAG
GCCCCGGTCTTCGAGCGTGCTCGGGCCCTGCCGGAGACCTTCTCCGAGGACGAGCTCTCACGCGGCACGGTGTTGCAGGC
CGCGGTGGTGCTGGCGCCCGGCGCCTCCGCCGAGGACGTCGCGGCCCGCATGCGCGCGCTGCCCGGTGGTGAAGCGCTGG
CCACGGTGGGTTGGCAGGAGGCGGGTGGGTTGCTGGGCGGTCTGGTGGTGATGCTCCAGGCGGTGCTGCTGCTCTTCGCG
CTGTTGATGTCCTCCTTCGTCGCGCTGGTCGCCGCTGGAACGCTGCTGCTGCTGGCGCGGGAACGCGTGGCGGAGGTCGG
CACGCTGCGCGCGGTGGGAATGCAACGTCGCGAGGTCTTCACCTCGCTGCTGCTGGAAGGGTCGCTGCTGGGCGGTATCG
GCAGCGTCCTGGGCGCGGTGCTGGGCGCGGCGTTGTTGTGGCTTGCGACCGGAGACGGCGTGGCGGTGGAGGATGGCTCC
CTGCAGTTCTTCCTGGGCGGCCCCGTGCTGCGTCCAGCGCTGGCGCTGGGCGGAACCGTGGCCGTGGTGGTGGCGGTGAC
GGCCGTGGTGCTGCTGGCGACACTGGTACCGGCCTGGCGAGGCAGCGCGGTGGAGCCCATCGAAGCCATGCGGAAGGGCG
AGGGCTGA

Upstream 100 bases:

>100_bases
ACGCGCAGGTGGACCTGCTCCTGCGCGTGCTGGAGCCCACGTGAGCGAGAGGCGGTAGTCCCTCCGCCCCGTCCGTTGTA
GCGTCCAACGACCCGGGCAT

Downstream 100 bases:

>100_bases
ACCGATGCGCGCACTTCTCCAGATTGCCTTCCGAAATCTCCTGGCCCACCGCGAGCGGGGACTGTTGCTGCTCATCGTGC
TCGCGGGCGCCAGCGCCGTG

Product: putative permease

Products: NA

Alternate protein names: Permease; ABC Transporter Permease

Number of amino acids: Translated: 695; Mature: 694

Protein sequence:

>695_residues
MSCPGMAPDRGVCVTLWSLTVQGVLARPRSWVVGLLAAGAAALLTPGVSLMGSIHDGTRRSLIESGAGDLQVYAAASTGT
PQVVVGPGGVPDLQPIPDYGALEPRLRDLPGIQEVVPLELGMGAVFRGNALDEKLAVLREAARAPASEERDARLRRLGED
LRLTLARVARNADRRSEAFAEEPAFADDLRVLRDAAEPAFWERLTEDPQGLLEVLENRVARQAGEGEELPVDYLGTDVAR
FARAFPRFELVSGQLPPPGTRGLVMGHATYEQHFKHPIAVRMDTLRRERERGLTLAEDEQLRTLVERNVAEVPDLVARLD
IERATALQAGLARVLGEPGELEALLARFLSVDDANFDTRFGQFYGELAPSLPLYRLKPGDVLSLKTPLESGTAVPVRVFG
IFRFRGLGGDDGRVNTMSVVDLVTARHLSGRFTQAQQDEARALFETFGMEGEAMAPPESLDAFHPPDIVDAEAQTAHTEQ
APVFERARALPETFSEDELSRGTVLQAAVVLAPGASAEDVAARMRALPGGEALATVGWQEAGGLLGGLVVMLQAVLLLFA
LLMSSFVALVAAGTLLLLARERVAEVGTLRAVGMQRREVFTSLLLEGSLLGGIGSVLGAVLGAALLWLATGDGVAVEDGS
LQFFLGGPVLRPALALGGTVAVVVAVTAVVLLATLVPAWRGSAVEPIEAMRKGEG

Sequences:

>Translated_695_residues
MSCPGMAPDRGVCVTLWSLTVQGVLARPRSWVVGLLAAGAAALLTPGVSLMGSIHDGTRRSLIESGAGDLQVYAAASTGT
PQVVVGPGGVPDLQPIPDYGALEPRLRDLPGIQEVVPLELGMGAVFRGNALDEKLAVLREAARAPASEERDARLRRLGED
LRLTLARVARNADRRSEAFAEEPAFADDLRVLRDAAEPAFWERLTEDPQGLLEVLENRVARQAGEGEELPVDYLGTDVAR
FARAFPRFELVSGQLPPPGTRGLVMGHATYEQHFKHPIAVRMDTLRRERERGLTLAEDEQLRTLVERNVAEVPDLVARLD
IERATALQAGLARVLGEPGELEALLARFLSVDDANFDTRFGQFYGELAPSLPLYRLKPGDVLSLKTPLESGTAVPVRVFG
IFRFRGLGGDDGRVNTMSVVDLVTARHLSGRFTQAQQDEARALFETFGMEGEAMAPPESLDAFHPPDIVDAEAQTAHTEQ
APVFERARALPETFSEDELSRGTVLQAAVVLAPGASAEDVAARMRALPGGEALATVGWQEAGGLLGGLVVMLQAVLLLFA
LLMSSFVALVAAGTLLLLARERVAEVGTLRAVGMQRREVFTSLLLEGSLLGGIGSVLGAVLGAALLWLATGDGVAVEDGS
LQFFLGGPVLRPALALGGTVAVVVAVTAVVLLATLVPAWRGSAVEPIEAMRKGEG
>Mature_694_residues
SCPGMAPDRGVCVTLWSLTVQGVLARPRSWVVGLLAAGAAALLTPGVSLMGSIHDGTRRSLIESGAGDLQVYAAASTGTP
QVVVGPGGVPDLQPIPDYGALEPRLRDLPGIQEVVPLELGMGAVFRGNALDEKLAVLREAARAPASEERDARLRRLGEDL
RLTLARVARNADRRSEAFAEEPAFADDLRVLRDAAEPAFWERLTEDPQGLLEVLENRVARQAGEGEELPVDYLGTDVARF
ARAFPRFELVSGQLPPPGTRGLVMGHATYEQHFKHPIAVRMDTLRRERERGLTLAEDEQLRTLVERNVAEVPDLVARLDI
ERATALQAGLARVLGEPGELEALLARFLSVDDANFDTRFGQFYGELAPSLPLYRLKPGDVLSLKTPLESGTAVPVRVFGI
FRFRGLGGDDGRVNTMSVVDLVTARHLSGRFTQAQQDEARALFETFGMEGEAMAPPESLDAFHPPDIVDAEAQTAHTEQA
PVFERARALPETFSEDELSRGTVLQAAVVLAPGASAEDVAARMRALPGGEALATVGWQEAGGLLGGLVVMLQAVLLLFAL
LMSSFVALVAAGTLLLLARERVAEVGTLRAVGMQRREVFTSLLLEGSLLGGIGSVLGAVLGAALLWLATGDGVAVEDGSL
QFFLGGPVLRPALALGGTVAVVVAVTAVVLLATLVPAWRGSAVEPIEAMRKGEG

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 73881; Mature: 73750

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSCPGMAPDRGVCVTLWSLTVQGVLARPRSWVVGLLAAGAAALLTPGVSLMGSIHDGTRR
CCCCCCCCCCCCEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHH
SLIESGAGDLQVYAAASTGTPQVVVGPGGVPDLQPIPDYGALEPRLRDLPGIQEVVPLEL
HHHHCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHH
GMGAVFRGNALDEKLAVLREAARAPASEERDARLRRLGEDLRLTLARVARNADRRSEAFA
CCCCEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
EEPAFADDLRVLRDAAEPAFWERLTEDPQGLLEVLENRVARQAGEGEELPVDYLGTDVAR
CCCCCHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
FARAFPRFELVSGQLPPPGTRGLVMGHATYEQHFKHPIAVRMDTLRRERERGLTLAEDEQ
HHHHCCCHHHHCCCCCCCCCCCEEEECHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHH
LRTLVERNVAEVPDLVARLDIERATALQAGLARVLGEPGELEALLARFLSVDDANFDTRF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHH
GQFYGELAPSLPLYRLKPGDVLSLKTPLESGTAVPVRVFGIFRFRGLGGDDGRVNTMSVV
HHHHHHHCCCCCEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHH
DLVTARHLSGRFTQAQQDEARALFETFGMEGEAMAPPESLDAFHPPDIVDAEAQTAHTEQ
HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCHHCCCCC
APVFERARALPETFSEDELSRGTVLQAAVVLAPGASAEDVAARMRALPGGEALATVGWQE
CHHHHHHHHCHHHCCHHHHCCCHHHHHHHEECCCCCHHHHHHHHHCCCCCCHHEECCHHH
AGGLLGGLVVMLQAVLLLFALLMSSFVALVAAGTLLLLARERVAEVGTLRAVGMQRREVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TSLLLEGSLLGGIGSVLGAVLGAALLWLATGDGVAVEDGSLQFFLGGPVLRPALALGGTV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEEECCCHHHHHHHHCHHH
AVVVAVTAVVLLATLVPAWRGSAVEPIEAMRKGEG
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCC
>Mature Secondary Structure 
SCPGMAPDRGVCVTLWSLTVQGVLARPRSWVVGLLAAGAAALLTPGVSLMGSIHDGTRR
CCCCCCCCCCCEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHH
SLIESGAGDLQVYAAASTGTPQVVVGPGGVPDLQPIPDYGALEPRLRDLPGIQEVVPLEL
HHHHCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHH
GMGAVFRGNALDEKLAVLREAARAPASEERDARLRRLGEDLRLTLARVARNADRRSEAFA
CCCCEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
EEPAFADDLRVLRDAAEPAFWERLTEDPQGLLEVLENRVARQAGEGEELPVDYLGTDVAR
CCCCCHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
FARAFPRFELVSGQLPPPGTRGLVMGHATYEQHFKHPIAVRMDTLRRERERGLTLAEDEQ
HHHHCCCHHHHCCCCCCCCCCCEEEECHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHH
LRTLVERNVAEVPDLVARLDIERATALQAGLARVLGEPGELEALLARFLSVDDANFDTRF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHH
GQFYGELAPSLPLYRLKPGDVLSLKTPLESGTAVPVRVFGIFRFRGLGGDDGRVNTMSVV
HHHHHHHCCCCCEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHH
DLVTARHLSGRFTQAQQDEARALFETFGMEGEAMAPPESLDAFHPPDIVDAEAQTAHTEQ
HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCHHCCCCC
APVFERARALPETFSEDELSRGTVLQAAVVLAPGASAEDVAARMRALPGGEALATVGWQE
CHHHHHHHHCHHHCCHHHHCCCHHHHHHHEECCCCCHHHHHHHHHCCCCCCHHEECCHHH
AGGLLGGLVVMLQAVLLLFALLMSSFVALVAAGTLLLLARERVAEVGTLRAVGMQRREVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TSLLLEGSLLGGIGSVLGAVLGAALLWLATGDGVAVEDGSLQFFLGGPVLRPALALGGTV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEEECCCHHHHHHHHCHHH
AVVVAVTAVVLLATLVPAWRGSAVEPIEAMRKGEG
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA