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The map label for this gene is 108757904

Identifier: 108757904

GI number: 108757904

Start: 7096833

End: 7097879

Strand: Reverse

Name: 108757904

Synonym: MXAN_5730

Alternate gene names: NA

Gene position: 7097879-7096833 (Counterclockwise)

Preceding gene: 108762385

Following gene: 108764012

Centisome position: 77.66

GC content: 69.53

Gene sequence:

>1047_bases
ATGGCGCGGCAGCCGTGGCCCGTGCCGTCGCTGTCGACCCAAGCCGAACTCGCGGAGTGGTTGGGGGTGACAGGGGCGCA
ACTGGACTGGCTGGCGGATGTACCGGGCATCGAGCGCACGTCCTCGCCAGGGCGGTGGCGGCGCTACCGGTACACCTGGA
TTCCGAAGCGCAGCGGCGGTGAGCGCCTGTTGGAGCGGCCGGGATTGGACCTGGTGCTGGTCCAGCGCAAGCTGCTCCAC
GACATTCTGGACCACATCCCGCCGCACGACGCGGCGCATGGCTTCGTCGCGGGGCGGAGCGTTCGTCGTTTCGCGGAGCC
TCACGCACGGCAGGCCGTCGTGGTGCGAGTGGACATCGAGGACTTCTTCTTCGCGGTGCGGCCCGCGCGAATCTGGGCGG
TGTTCCGCACGGCGGGATATCCGGACGGCGTAGTGCGCGCGCTCGCGGGCCTCTGCACGAACCGCACACCCAGCGCGGTG
GTGTCGCAGGCGCGGCGGCCGGATTCACTCGCCGATGCGAGCACGCGCTGGCGTCTGGCGCGGAGGCTCGAATCGCGTCA
CCTGCCACAGGGGGCGCCCACGTCACCCGCGCTGGCCAACCTCGCGGCGTACCGGCTCGACGTCCGGCTGTCGGCGCTCG
CCGAGGCGATGGGCGCGCGGTACACGCGATACGCGGATGACATGGCGTTCTCGGGTGGTGACGCATTGGCCCGGCGCACG
CACAAGTTGCTGCGGTACGTGAGCCAGATTCTCCGGGAGGAGGGCTTCACGCCGCGCACAGGGAAGACGCGGGTGATGCA
CCGGAGCACCCAGCAGCGGCTCGCGGGCGTGGTGGTGAATGATCATCCTTCGATTCGCCGTGTGGACTACGAGCGGCTGA
AGGCCATTCTCCACCTGTGCCGCACACGAGGCCCCGCGAGTCAGAACACCGAGGGCCATCCCGACTTCCGAGCGCATCTG
CTGGGACGCATCGCCTGGGTAGCGCACCTGCATCCAGCCCGGGGCGCGAAACTGCGCGCCACTTTCGACCAGATTGCGTG
GGACTGA

Upstream 100 bases:

>100_bases
GCTCGGGGACTTGTTGGCTTCGCGCCCCGCGTTCATGCGGGGCTTCACAGACCCTTCGGCGCGTGCGCGCATCGTGCGTT
GGATTTCGTCCGAGCCGCGG

Downstream 100 bases:

>100_bases
CGCCCACGCCTTTCGACTACCCGACGGGCCAGTAGAGCTTTTTCAGGGGGACCAGCGCCCGTGTCTCCGCGTCGAGGTTC
TCGTACTGCTCGACCAGAAG

Product: putative reverse transcriptase

Products: NA

Alternate protein names: Mx65-RT; Reverse transcriptase [H]

Number of amino acids: Translated: 348; Mature: 347

Protein sequence:

>348_residues
MARQPWPVPSLSTQAELAEWLGVTGAQLDWLADVPGIERTSSPGRWRRYRYTWIPKRSGGERLLERPGLDLVLVQRKLLH
DILDHIPPHDAAHGFVAGRSVRRFAEPHARQAVVVRVDIEDFFFAVRPARIWAVFRTAGYPDGVVRALAGLCTNRTPSAV
VSQARRPDSLADASTRWRLARRLESRHLPQGAPTSPALANLAAYRLDVRLSALAEAMGARYTRYADDMAFSGGDALARRT
HKLLRYVSQILREEGFTPRTGKTRVMHRSTQQRLAGVVVNDHPSIRRVDYERLKAILHLCRTRGPASQNTEGHPDFRAHL
LGRIAWVAHLHPARGAKLRATFDQIAWD

Sequences:

>Translated_348_residues
MARQPWPVPSLSTQAELAEWLGVTGAQLDWLADVPGIERTSSPGRWRRYRYTWIPKRSGGERLLERPGLDLVLVQRKLLH
DILDHIPPHDAAHGFVAGRSVRRFAEPHARQAVVVRVDIEDFFFAVRPARIWAVFRTAGYPDGVVRALAGLCTNRTPSAV
VSQARRPDSLADASTRWRLARRLESRHLPQGAPTSPALANLAAYRLDVRLSALAEAMGARYTRYADDMAFSGGDALARRT
HKLLRYVSQILREEGFTPRTGKTRVMHRSTQQRLAGVVVNDHPSIRRVDYERLKAILHLCRTRGPASQNTEGHPDFRAHL
LGRIAWVAHLHPARGAKLRATFDQIAWD
>Mature_347_residues
ARQPWPVPSLSTQAELAEWLGVTGAQLDWLADVPGIERTSSPGRWRRYRYTWIPKRSGGERLLERPGLDLVLVQRKLLHD
ILDHIPPHDAAHGFVAGRSVRRFAEPHARQAVVVRVDIEDFFFAVRPARIWAVFRTAGYPDGVVRALAGLCTNRTPSAVV
SQARRPDSLADASTRWRLARRLESRHLPQGAPTSPALANLAAYRLDVRLSALAEAMGARYTRYADDMAFSGGDALARRTH
KLLRYVSQILREEGFTPRTGKTRVMHRSTQQRLAGVVVNDHPSIRRVDYERLKAILHLCRTRGPASQNTEGHPDFRAHLL
GRIAWVAHLHPARGAKLRATFDQIAWD

Specific function: Participates in the synthesis of a msDNA (a branched RNA linked by a 2',5'-phosphodiester linkage to a single-stranded DNA) of unknown function. The retron transcript serves as primer and template to the reaction, and codes for the RT [H]

COG id: COG3344

COG function: function code L; Retron-type reverse transcriptase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 reverse transcriptase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000123
- InterPro:   IPR000477 [H]

Pfam domain/function: PF00078 RVT_1 [H]

EC number: =2.7.7.49 [H]

Molecular weight: Translated: 39194; Mature: 39063

Theoretical pI: Translated: 11.58; Mature: 11.58

Prosite motif: PS50878 RT_POL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARQPWPVPSLSTQAELAEWLGVTGAQLDWLADVPGIERTSSPGRWRRYRYTWIPKRSGG
CCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCC
ERLLERPGLDLVLVQRKLLHDILDHIPPHDAAHGFVAGRSVRRFAEPHARQAVVVRVDIE
HHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEHH
DFFFAVRPARIWAVFRTAGYPDGVVRALAGLCTNRTPSAVVSQARRPDSLADASTRWRLA
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHH
RRLESRHLPQGAPTSPALANLAAYRLDVRLSALAEAMGARYTRYADDMAFSGGDALARRT
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHH
HKLLRYVSQILREEGFTPRTGKTRVMHRSTQQRLAGVVVNDHPSIRRVDYERLKAILHLC
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCEEECCCCCHHHCCHHHHHHHHHHH
RTRGPASQNTEGHPDFRAHLLGRIAWVAHLHPARGAKLRATFDQIAWD
HCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHCCC
>Mature Secondary Structure 
ARQPWPVPSLSTQAELAEWLGVTGAQLDWLADVPGIERTSSPGRWRRYRYTWIPKRSGG
CCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCC
ERLLERPGLDLVLVQRKLLHDILDHIPPHDAAHGFVAGRSVRRFAEPHARQAVVVRVDIE
HHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEHH
DFFFAVRPARIWAVFRTAGYPDGVVRALAGLCTNRTPSAVVSQARRPDSLADASTRWRLA
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHH
RRLESRHLPQGAPTSPALANLAAYRLDVRLSALAEAMGARYTRYADDMAFSGGDALARRT
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHH
HKLLRYVSQILREEGFTPRTGKTRVMHRSTQQRLAGVVVNDHPSIRRVDYERLKAILHLC
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCEEECCCCCHHHCCHHHHHHHHHHH
RTRGPASQNTEGHPDFRAHLLGRIAWVAHLHPARGAKLRATFDQIAWD
HCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1689062 [H]