| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108757896
Identifier: 108757896
GI number: 108757896
Start: 2560836
End: 2561600
Strand: Reverse
Name: 108757896
Synonym: MXAN_2221
Alternate gene names: NA
Gene position: 2561600-2560836 (Counterclockwise)
Preceding gene: 108759509
Following gene: 108757217
Centisome position: 28.03
GC content: 61.83
Gene sequence:
>765_bases ATGTTCAAGAGAGCGGCAGTCCTGATGTTGAACTGTGGCGCCTTGCTGTCCGGCTGCGGGCCCGACTCACATACCGGGAA CGCTGAACTCCTCTCCAATCTGACCGAGGCAGGGTTTCGCCCCGACGACATCACCGTCGTCGATGACGCCGTCTACGTCG GGGGCGACGCGCATGTGACGCTCGCGGCCTCCCGGGAGATGCTCCAGCGCGGAGAGGGAAGCAAAGAGCACTACATGACG ACCAACATCGTCGGCTCCAGCGTGACGAGGATTTGCGTCAATCCCACGACGGAGTTCCGGAGCTATGTCCGGCTCATCCA AGGTCTCGATATGGCACTCGCCAACTACAATGCCTTGGGACTCAGGATTACCTTTGTTCGAGGCCCGGCCACCGGCTGTA CCGCGAACATCACCGCGAAAACCATGGCGGGGAGTGGTCACGTCGCGGGCTTTCCCTCAGGAGGACTTCCCTATGGGGCG ATTTCGATTGGCACCGGCCTGAACAGCTACGGCGTAGACCTGAATGAGCATGTCATCACCCATGCGCTGGGCCACACGCT GGGCCTCCGCCACACGGACCATTTCAACCCGAGCATCAGCTGTGGCAGTGGCGCGATGGAGCCGACGGGCACGGGCGCAT TGCACATCCCCGGAACGCCAACGGGGGCAACGCCGGGCGGGTCCATCATGAATACCTGCTACCCGTCTGGCACCGACGGT GAGTTCACCCCTTCCGACATCGTCGCGTTGAACTTCATGTACTGA
Upstream 100 bases:
>100_bases GCCAAAGGAGTGGCCAGGCACGGTGCCGCCTCGACTTCCGCCATGCTTTGCTCGAGCGAGCAGAGCAGAAACCCGATTCA CGACAGGAGCCCATCGAACC
Downstream 100 bases:
>100_bases GATGCTGCGGGATGATGCGCCTGCACATGAGGCGCATCATCCGCCGCCGCCGCGACATGTCCGCCGAGGCGATTCGTCGG GACGCGGAAGCCATCACAGC
Product: M27 family peptidase
Products: NA
Alternate protein names: M27 Family Peptidase; Ricin B Lectin
Number of amino acids: Translated: 254; Mature: 254
Protein sequence:
>254_residues MFKRAAVLMLNCGALLSGCGPDSHTGNAELLSNLTEAGFRPDDITVVDDAVYVGGDAHVTLAASREMLQRGEGSKEHYMT TNIVGSSVTRICVNPTTEFRSYVRLIQGLDMALANYNALGLRITFVRGPATGCTANITAKTMAGSGHVAGFPSGGLPYGA ISIGTGLNSYGVDLNEHVITHALGHTLGLRHTDHFNPSISCGSGAMEPTGTGALHIPGTPTGATPGGSIMNTCYPSGTDG EFTPSDIVALNFMY
Sequences:
>Translated_254_residues MFKRAAVLMLNCGALLSGCGPDSHTGNAELLSNLTEAGFRPDDITVVDDAVYVGGDAHVTLAASREMLQRGEGSKEHYMT TNIVGSSVTRICVNPTTEFRSYVRLIQGLDMALANYNALGLRITFVRGPATGCTANITAKTMAGSGHVAGFPSGGLPYGA ISIGTGLNSYGVDLNEHVITHALGHTLGLRHTDHFNPSISCGSGAMEPTGTGALHIPGTPTGATPGGSIMNTCYPSGTDG EFTPSDIVALNFMY >Mature_254_residues MFKRAAVLMLNCGALLSGCGPDSHTGNAELLSNLTEAGFRPDDITVVDDAVYVGGDAHVTLAASREMLQRGEGSKEHYMT TNIVGSSVTRICVNPTTEFRSYVRLIQGLDMALANYNALGLRITFVRGPATGCTANITAKTMAGSGHVAGFPSGGLPYGA ISIGTGLNSYGVDLNEHVITHALGHTLGLRHTDHFNPSISCGSGAMEPTGTGALHIPGTPTGATPGGSIMNTCYPSGTDG EFTPSDIVALNFMY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26324; Mature: 26324
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKRAAVLMLNCGALLSGCGPDSHTGNAELLSNLTEAGFRPDDITVVDDAVYVGGDAHVT CCCCEEEEEEECCHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEECEEEECCCCEEE LAASREMLQRGEGSKEHYMTTNIVGSSVTRICVNPTTEFRSYVRLIQGLDMALANYNALG EHHHHHHHHCCCCCCHHEEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEE LRITFVRGPATGCTANITAKTMAGSGHVAGFPSGGLPYGAISIGTGLNSYGVDLNEHVIT EEEEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHH HALGHTLGLRHTDHFNPSISCGSGAMEPTGTGALHIPGTPTGATPGGSIMNTCYPSGTDG HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHCCCCCCCC EFTPSDIVALNFMY CCCCCCEEEEEEEC >Mature Secondary Structure MFKRAAVLMLNCGALLSGCGPDSHTGNAELLSNLTEAGFRPDDITVVDDAVYVGGDAHVT CCCCEEEEEEECCHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEECEEEECCCCEEE LAASREMLQRGEGSKEHYMTTNIVGSSVTRICVNPTTEFRSYVRLIQGLDMALANYNALG EHHHHHHHHCCCCCCHHEEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEE LRITFVRGPATGCTANITAKTMAGSGHVAGFPSGGLPYGAISIGTGLNSYGVDLNEHVIT EEEEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHH HALGHTLGLRHTDHFNPSISCGSGAMEPTGTGALHIPGTPTGATPGGSIMNTCYPSGTDG HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHCCCCCCCC EFTPSDIVALNFMY CCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA