| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is fmt [H]
Identifier: 108757821
GI number: 108757821
Start: 951518
End: 952366
Strand: Reverse
Name: fmt [H]
Synonym: MXAN_0837
Alternate gene names: 108757821
Gene position: 952366-951518 (Counterclockwise)
Preceding gene: 108758252
Following gene: 108763449
Centisome position: 10.42
GC content: 67.02
Gene sequence:
>849_bases TTGACCATGCTCCGCTTCGCCTACGGCTGCATTCCCTCCGTCATGTCCCTGTACTTCGCCAACACCCTGGTGCGGCGAGC AGGGCTGGCGCCCGCGTGCATCCTCCTGTCCGCGGGGGGCCTGCGCTTCCAGAAGAAGCGCTACACCCCGGCCCAAGTGC TGCCTGTCTTCCTGAAGCAGTTTGGCCCGCGCTTCACCGGCTACAACGTGCTCGCCGGGCTGAGTGGCTCGCTGCCCTTC AGCATTCCCGCCTCGGGGTTGATGAGCTTCCAGGCGCTCTCCCAGGCGTATGGCATTCCGCTGGTCATCAGTGATGACTT CTCCGGAGCGGCCACGGTGAGCGAGCTCGAGCGGCACGGGGTGGAGTTGTTCCTCACCAGCATGTGCGATCAAATCATCC GGGAGCCACTGCTCAGTCTGCCGCGCCATGGCTGTTTGAACATCCACCCATCGCTGCTGCCGGAGTTCCGCGGCGTGGAC TCCGTCTTCCAGGCCATGCTGAACGGCGTGTCTGAGATTGGAACGACACTCCACCGCACCACCGCGCGCATCGACGCGGG CGACGTGCTGGCCCAGAGCGCGTTCACCCGTACGGCCGCCGATTCCCACCTGGCGTTGACGGCGAAGGCGACCGCCGCGG GCATTGCCCTGCTCAAGCGGCACATGGAGACCCTGGAGCGCGGAGAGACGCCGGACGCGCGCCCCATCGACGTGAGCCGG GCGCGATATCCCTACCGCTCCTGGCCGGAACGGGAGGAGCTGCGCCGCTTCCACGCCCAGGGGAACACCTTCTGGCGGGC GTCGGACTTCCGCCGCCTCCTCGCCTTCGAGGACGTGCTGGCGACATAG
Upstream 100 bases:
>100_bases TGCTGCCCGCGCTGCTGAGCGAGAAGCAGCCGCAGGAGCGACGGAAGTTCCGCGTCTCCACCTTCGACGACGACTCGCAG CCCCCCACTGACCAGGCCGC
Downstream 100 bases:
>100_bases CGCGACACAAACGACACGCCGGGCGGGAGAGGCTCCCACCCGGCGTGGATGCTTCGGACCGCTGACTACTTGCCGCGGCT GATGGACTCGCTGTGGATGG
Product: formyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 282; Mature: 281
Protein sequence:
>282_residues MTMLRFAYGCIPSVMSLYFANTLVRRAGLAPACILLSAGGLRFQKKRYTPAQVLPVFLKQFGPRFTGYNVLAGLSGSLPF SIPASGLMSFQALSQAYGIPLVISDDFSGAATVSELERHGVELFLTSMCDQIIREPLLSLPRHGCLNIHPSLLPEFRGVD SVFQAMLNGVSEIGTTLHRTTARIDAGDVLAQSAFTRTAADSHLALTAKATAAGIALLKRHMETLERGETPDARPIDVSR ARYPYRSWPEREELRRFHAQGNTFWRASDFRRLLAFEDVLAT
Sequences:
>Translated_282_residues MTMLRFAYGCIPSVMSLYFANTLVRRAGLAPACILLSAGGLRFQKKRYTPAQVLPVFLKQFGPRFTGYNVLAGLSGSLPF SIPASGLMSFQALSQAYGIPLVISDDFSGAATVSELERHGVELFLTSMCDQIIREPLLSLPRHGCLNIHPSLLPEFRGVD SVFQAMLNGVSEIGTTLHRTTARIDAGDVLAQSAFTRTAADSHLALTAKATAAGIALLKRHMETLERGETPDARPIDVSR ARYPYRSWPEREELRRFHAQGNTFWRASDFRRLLAFEDVLAT >Mature_281_residues TMLRFAYGCIPSVMSLYFANTLVRRAGLAPACILLSAGGLRFQKKRYTPAQVLPVFLKQFGPRFTGYNVLAGLSGSLPFS IPASGLMSFQALSQAYGIPLVISDDFSGAATVSELERHGVELFLTSMCDQIIREPLLSLPRHGCLNIHPSLLPEFRGVDS VFQAMLNGVSEIGTTLHRTTARIDAGDVLAQSAFTRTAADSHLALTAKATAAGIALLKRHMETLERGETPDARPIDVSRA RYPYRSWPEREELRRFHAQGNTFWRASDFRRLLAFEDVLAT
Specific function: Modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by:(I) promoting its recognition by IF2 and (II) impairing its binding to EFTu-
COG id: COG0223
COG function: function code J; Methionyl-tRNA formyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fmt family [H]
Homologues:
Organism=Escherichia coli, GI1788589, Length=141, Percent_Identity=28.3687943262411, Blast_Score=65, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005794 - InterPro: IPR005793 - InterPro: IPR002376 - InterPro: IPR011034 - InterPro: IPR001555 - InterPro: IPR015518 [H]
Pfam domain/function: PF02911 Formyl_trans_C; PF00551 Formyl_trans_N [H]
EC number: =2.1.2.9 [H]
Molecular weight: Translated: 31064; Mature: 30933
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMLRFAYGCIPSVMSLYFANTLVRRAGLAPACILLSAGGLRFQKKRYTPAQVLPVFLKQ CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEHHCCCCHHHHHHHHHHH FGPRFTGYNVLAGLSGSLPFSIPASGLMSFQALSQAYGIPLVISDDFSGAATVSELERHG HCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCC VELFLTSMCDQIIREPLLSLPRHGCLNIHPSLLPEFRGVDSVFQAMLNGVSEIGTTLHRT HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH TARIDAGDVLAQSAFTRTAADSHLALTAKATAAGIALLKRHMETLERGETPDARPIDVSR HHHCCHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH ARYPYRSWPEREELRRFHAQGNTFWRASDFRRLLAFEDVLAT CCCCCCCCCCHHHHHHHHHCCCCEECHHHHHHHHHHHHHHCC >Mature Secondary Structure TMLRFAYGCIPSVMSLYFANTLVRRAGLAPACILLSAGGLRFQKKRYTPAQVLPVFLKQ CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEHHCCCCHHHHHHHHHHH FGPRFTGYNVLAGLSGSLPFSIPASGLMSFQALSQAYGIPLVISDDFSGAATVSELERHG HCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCC VELFLTSMCDQIIREPLLSLPRHGCLNIHPSLLPEFRGVDSVFQAMLNGVSEIGTTLHRT HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH TARIDAGDVLAQSAFTRTAADSHLALTAKATAAGIALLKRHMETLERGETPDARPIDVSR HHHCCHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH ARYPYRSWPEREELRRFHAQGNTFWRASDFRRLLAFEDVLAT CCCCCCCCCCHHHHHHHHHCCCCEECHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA