| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is vanA [H]
Identifier: 108757788
GI number: 108757788
Start: 1131879
End: 1132970
Strand: Direct
Name: vanA [H]
Synonym: MXAN_0981
Alternate gene names: 108757788
Gene position: 1131879-1132970 (Clockwise)
Preceding gene: 108762927
Following gene: 108759659
Centisome position: 12.38
GC content: 69.78
Gene sequence:
>1092_bases ATGAGCTCTCGCGAGGAGGGGCGCACCTCCGGTACGCCCGCTGGACATATCTCCGTCGTCCACCTGCCCAACGCCTGGTT CATCCTCTGTGCTTCGAGTGAGCTGGGAGACAAGCCCCTGGCACGCACGCTCCAGGGCTCGCCCCTGGTGCTCTTCCGAG GTGAGGGCGGCAAGCCCGCGGCCCTGGTGGACCGCTGCCCGCACCGCAACGTGCCGCTGTCGCTGGGCCGGGTGAAGGAA GGCCAGCTCCAGTGCGGCTACCACGGCTGGCGTTTCGACGGCGCGGGGCAGTGCCGCGCCATCCCTGGCTTCCTGGGCGA GCCCGGCGCGCGTGCTCGCTGTGCCACGGCGCATGCCACGCGTGAGCAGGATGGCTTCGTCTGGGTCTACTCCACGCCGG GCGTCGAGCCCACCACGGAGCCCTACCGCTTCCCGCTTCTGGAGGCGCGCGAATACACCACCGTGCGCCGCACGCTTCGG GCCCCCGGCTCGCTGCACTCCACGCTGGAGAACACGCTGGACGTGCCCCACACCGCGTACCTCCATGGCGGGCTGTTCCG CACCGAGGAGAAGCGGAACGAAATCGACGTGGTGGTGCGCCGGAGCGCGGACAAGGTGGAGGCCGAGTACATCGGCGAGC CGCGTCCCAGCGGGCTCGTGGGCCGGCTGCTCGCGCCGGGTGGCGGGGTGGTACAGCACTTCGATCGCTTCCTGATGCCC TCCATCGCCCAGGTGGAGTACCGCATTGGTGACACCAGCCACATCATGGTGACCTCCGCGATGACGCCCGTGTCGGACTG GGACACGCTGGTGTACGCGGTGGTGACGTTCCGTCTGCCATTGCCCCGCTGGTTGGTGCGCGCGGCGCTCCCGCTCCTCA TGCCCGTGGCGCTCCACATCTTCGGGCAGGACGCGCGCATCCTCCGGCAGCAGACGGAGACCATCCGCCGCTTCGGCACG GAGGCCTATGCCTCCACGGAAATCGACGTGCTCGGTCCCGGCATCCTCCGCCTGCTGCGCGCCGCCGAGCGCGAGAAGCC TGGCGCCGTGGGGGACGCGGTGCATGAAACACGACTGAAGATGCGGACCTGA
Upstream 100 bases:
>100_bases CCTTCCCGCATGAGGGGGCGCCCGGAAGAGTCCAGGCAAGCCGGAACGGCCCTGTCGCGGAGCCCTTCACTCGCCGTCGA GGCCGATTAGAGTGCGCTCC
Downstream 100 bases:
>100_bases GAGCCATTGCGACGCGGCGTGTCGTGAGACACGGTGGAGACACTGGGTCTCACGATACCTGGGGCCGCTCCATGTATCTG AATGGAGCCCTGGGCTGAAA
Product: Rieske family iron-sulfur cluster-binding protein
Products: NA
Alternate protein names: 4-hydroxy-3-methoxybenzoate demethylase [H]
Number of amino acids: Translated: 363; Mature: 362
Protein sequence:
>363_residues MSSREEGRTSGTPAGHISVVHLPNAWFILCASSELGDKPLARTLQGSPLVLFRGEGGKPAALVDRCPHRNVPLSLGRVKE GQLQCGYHGWRFDGAGQCRAIPGFLGEPGARARCATAHATREQDGFVWVYSTPGVEPTTEPYRFPLLEAREYTTVRRTLR APGSLHSTLENTLDVPHTAYLHGGLFRTEEKRNEIDVVVRRSADKVEAEYIGEPRPSGLVGRLLAPGGGVVQHFDRFLMP SIAQVEYRIGDTSHIMVTSAMTPVSDWDTLVYAVVTFRLPLPRWLVRAALPLLMPVALHIFGQDARILRQQTETIRRFGT EAYASTEIDVLGPGILRLLRAAEREKPGAVGDAVHETRLKMRT
Sequences:
>Translated_363_residues MSSREEGRTSGTPAGHISVVHLPNAWFILCASSELGDKPLARTLQGSPLVLFRGEGGKPAALVDRCPHRNVPLSLGRVKE GQLQCGYHGWRFDGAGQCRAIPGFLGEPGARARCATAHATREQDGFVWVYSTPGVEPTTEPYRFPLLEAREYTTVRRTLR APGSLHSTLENTLDVPHTAYLHGGLFRTEEKRNEIDVVVRRSADKVEAEYIGEPRPSGLVGRLLAPGGGVVQHFDRFLMP SIAQVEYRIGDTSHIMVTSAMTPVSDWDTLVYAVVTFRLPLPRWLVRAALPLLMPVALHIFGQDARILRQQTETIRRFGT EAYASTEIDVLGPGILRLLRAAEREKPGAVGDAVHETRLKMRT >Mature_362_residues SSREEGRTSGTPAGHISVVHLPNAWFILCASSELGDKPLARTLQGSPLVLFRGEGGKPAALVDRCPHRNVPLSLGRVKEG QLQCGYHGWRFDGAGQCRAIPGFLGEPGARARCATAHATREQDGFVWVYSTPGVEPTTEPYRFPLLEAREYTTVRRTLRA PGSLHSTLENTLDVPHTAYLHGGLFRTEEKRNEIDVVVRRSADKVEAEYIGEPRPSGLVGRLLAPGGGVVQHFDRFLMPS IAQVEYRIGDTSHIMVTSAMTPVSDWDTLVYAVVTFRLPLPRWLVRAALPLLMPVALHIFGQDARILRQQTETIRRFGTE AYASTEIDVLGPGILRLLRAAEREKPGAVGDAVHETRLKMRT
Specific function: Unknown
COG id: COG4638
COG function: function code PR; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Rieske domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017941 - InterPro: IPR015881 [H]
Pfam domain/function: PF00355 Rieske [H]
EC number: =1.14.13.82 [H]
Molecular weight: Translated: 40024; Mature: 39893
Theoretical pI: Translated: 8.94; Mature: 8.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSREEGRTSGTPAGHISVVHLPNAWFILCASSELGDKPLARTLQGSPLVLFRGEGGKPA CCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCHHHHHCCCCCEEEEECCCCCCH ALVDRCPHRNVPLSLGRVKEGQLQCGYHGWRFDGAGQCRAIPGFLGEPGARARCATAHAT HHHHCCCCCCCCCCCCCCCCCCEEECCCCEEECCCCCCEECCCCCCCCCCCCEEHHHHCC REQDGFVWVYSTPGVEPTTEPYRFPLLEAREYTTVRRTLRAPGSLHSTLENTLDVPHTAY CCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHH LHGGLFRTEEKRNEIDVVVRRSADKVEAEYIGEPRPSGLVGRLLAPGGGVVQHFDRFLMP HCCCEEECHHHCCCEEEEEECCCCHHHHHHCCCCCCCCCHHHEECCCCHHHHHHHHHHCC SIAQVEYRIGDTSHIMVTSAMTPVSDWDTLVYAVVTFRLPLPRWLVRAALPLLMPVALHI CHHHEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH FGQDARILRQQTETIRRFGTEAYASTEIDVLGPGILRLLRAAEREKPGAVGDAVHETRLK CCCCHHHHHHHHHHHHHHCCHHHCCCCEEEECHHHHHHHHHHHHCCCCCCHHHHHHHHHH MRT CCC >Mature Secondary Structure SSREEGRTSGTPAGHISVVHLPNAWFILCASSELGDKPLARTLQGSPLVLFRGEGGKPA CCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCHHHHHCCCCCEEEEECCCCCCH ALVDRCPHRNVPLSLGRVKEGQLQCGYHGWRFDGAGQCRAIPGFLGEPGARARCATAHAT HHHHCCCCCCCCCCCCCCCCCCEEECCCCEEECCCCCCEECCCCCCCCCCCCEEHHHHCC REQDGFVWVYSTPGVEPTTEPYRFPLLEAREYTTVRRTLRAPGSLHSTLENTLDVPHTAY CCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHH LHGGLFRTEEKRNEIDVVVRRSADKVEAEYIGEPRPSGLVGRLLAPGGGVVQHFDRFLMP HCCCEEECHHHCCCEEEEEECCCCHHHHHHCCCCCCCCCHHHEECCCCHHHHHHHHHHCC SIAQVEYRIGDTSHIMVTSAMTPVSDWDTLVYAVVTFRLPLPRWLVRAALPLLMPVALHI CHHHEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH FGQDARILRQQTETIRRFGTEAYASTEIDVLGPGILRLLRAAEREKPGAVGDAVHETRLK CCCCHHHHHHHHHHHHHHCCHHHCCCCEEEECHHHHHHHHHHHHCCCCCCHHHHHHHHHH MRT CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9098058 [H]