| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is glp [H]
Identifier: 108757775
GI number: 108757775
Start: 3109039
End: 3110502
Strand: Direct
Name: glp [H]
Synonym: MXAN_2663
Alternate gene names: 108757775
Gene position: 3109039-3110502 (Clockwise)
Preceding gene: 108757489
Following gene: 108758312
Centisome position: 34.02
GC content: 68.03
Gene sequence:
>1464_bases ATGTCGTCGCTGCCCCCCTGGCTGGCCCAGTTCCTGCCCATCCTCATCCTCCTGGGGGCCATCGGCCTCGTCCTCACGCG CCTGCCCAAGGTGGAGCTGGGACACTCGGAGGCATTCAAGCGCCGCCGGTTCTTCAACTGGTTCCCGTTGGGCATGACGT ACGCGTTCCTCTACATGGGGCGCTACAACCTCAACGTGGCCACCAGCGCCATGGGGGACCGCACCTCCAACGCGGACTTC GGCACCATCTTCGCGTGGGGCACCGCCGTCTACGGCGTGGCCTTCCTCCTCAACGGCCCGCTGACGGACAAGCTGGGCGG CCGGAAGACCATCCTGATGGCGGCCGCGGGTTCGGCGGTGGCGAACGTGGCCATGGGCGGCGTGGTGTACGCGGTGCTGA CGCACAACTGGGCGCCGCCGGGCGGCCTGGTGGCGACGCTGTCGTTCCTCTACGCCGTCAACATGTACTTCCAGAGCTTC GGCGCGGTCTCCATCGTCAAGGTGAACGCGGCCTGGTTCCACGTGCGCGAGCGCGGCCTGCTGGGCGGCGTGTTCGGCAT CCTCATCTCGCTGGGCATCTACTTCGCCTACGACTGGAGCCGGCTCATCGTGAAGGCGGCGCCCACGTACTGGGCGTTCT TCGTGCCCGCGGCCATCCTCGCCGTGTTCCTGGTGGTGGACTACTTCGTCATCCGCGACACGCCCAGCCACGCGGGCCAT CCGGACTTCGACACCGCGGACGCGTCCTCCGGAGAGACGGGGCCGCAGTTGGGGGTGGCGGGCGTGCTGAAGCGCATGCT GACCAACCGCGCCATCATCATCATCCTCTGCATCGAGTTCTGCAGCGGCTTCATGCGCAACGCCATCATGCAGTGGTACC CCAAGTTCGCGAAGGCGACGGGCCTTGGCGAAACGTTCGTCGCGGCCAACTGGGGCATGCTGCTGTGCGTGGCGGGCATC ACCGGCGGCATGTTCGCCGGCGTCATCAGCGACCGCGTCTTCGACTCACGCCGCGGCCCCGTGTCCGCCGTGCTCTACGC CGGCATGTCGGTGGGCGCCGTCATCTCCGTGTTCGTCCTGGAGAGCGTGGCCCTGGGCTGGACGGTCATCTTCATGTCCC TGTGTGTCATCGGCGTGCACGGCATGCTGTCCGGCACGGCCAGCATGGACTTCGGCGGGAAGAAGAACGCCGGCCTCGCT GTTGGCATCATCGACGGCGCCGTGTACGCGGGCACCGCGCTGCAGTCCATCCTGCTGGGTTCCATCCTGCCGATGGGTGA CGAGGCGAAGACCGCCGCCAACTGGGGCAACTGGCCCTACGCCATGCTGCCGCTGTCCTTCCTCGGGCTGCTGCTGGCCA CCCAGGTGTGGAACGCCCGGCCCCAGCCGAAGTCCACGCCTGTGCCGGCCACCCTGCCGGTGCCCTCGGAGGCGCCAGCG AATCGGACCGGTACTGGCGGGTGA
Upstream 100 bases:
>100_bases CTGCTCGCCCTGCAGCCCTGAAGGGCGTGCATTGTTTTCGCACGGCCGCGTGCCGGGGTAGGGTGCGCGGCGTTCCGCAA TCCACCGCAGAGGTCGCTGC
Downstream 100 bases:
>100_bases TATCCATGTGGCCCCAACGATGTGTGACGTTGGGGTCACTCCCGCGTGACAGGGATGTAGCGTAGACTCCAGGTGTGTCC CAGTCACCCGCACCCCTGCA
Product: glycerol 3-phosphate permease
Products: NA
Alternate protein names: G-3-P transporter; G-3-P permease [H]
Number of amino acids: Translated: 487; Mature: 486
Protein sequence:
>487_residues MSSLPPWLAQFLPILILLGAIGLVLTRLPKVELGHSEAFKRRRFFNWFPLGMTYAFLYMGRYNLNVATSAMGDRTSNADF GTIFAWGTAVYGVAFLLNGPLTDKLGGRKTILMAAAGSAVANVAMGGVVYAVLTHNWAPPGGLVATLSFLYAVNMYFQSF GAVSIVKVNAAWFHVRERGLLGGVFGILISLGIYFAYDWSRLIVKAAPTYWAFFVPAAILAVFLVVDYFVIRDTPSHAGH PDFDTADASSGETGPQLGVAGVLKRMLTNRAIIIILCIEFCSGFMRNAIMQWYPKFAKATGLGETFVAANWGMLLCVAGI TGGMFAGVISDRVFDSRRGPVSAVLYAGMSVGAVISVFVLESVALGWTVIFMSLCVIGVHGMLSGTASMDFGGKKNAGLA VGIIDGAVYAGTALQSILLGSILPMGDEAKTAANWGNWPYAMLPLSFLGLLLATQVWNARPQPKSTPVPATLPVPSEAPA NRTGTGG
Sequences:
>Translated_487_residues MSSLPPWLAQFLPILILLGAIGLVLTRLPKVELGHSEAFKRRRFFNWFPLGMTYAFLYMGRYNLNVATSAMGDRTSNADF GTIFAWGTAVYGVAFLLNGPLTDKLGGRKTILMAAAGSAVANVAMGGVVYAVLTHNWAPPGGLVATLSFLYAVNMYFQSF GAVSIVKVNAAWFHVRERGLLGGVFGILISLGIYFAYDWSRLIVKAAPTYWAFFVPAAILAVFLVVDYFVIRDTPSHAGH PDFDTADASSGETGPQLGVAGVLKRMLTNRAIIIILCIEFCSGFMRNAIMQWYPKFAKATGLGETFVAANWGMLLCVAGI TGGMFAGVISDRVFDSRRGPVSAVLYAGMSVGAVISVFVLESVALGWTVIFMSLCVIGVHGMLSGTASMDFGGKKNAGLA VGIIDGAVYAGTALQSILLGSILPMGDEAKTAANWGNWPYAMLPLSFLGLLLATQVWNARPQPKSTPVPATLPVPSEAPA NRTGTGG >Mature_486_residues SSLPPWLAQFLPILILLGAIGLVLTRLPKVELGHSEAFKRRRFFNWFPLGMTYAFLYMGRYNLNVATSAMGDRTSNADFG TIFAWGTAVYGVAFLLNGPLTDKLGGRKTILMAAAGSAVANVAMGGVVYAVLTHNWAPPGGLVATLSFLYAVNMYFQSFG AVSIVKVNAAWFHVRERGLLGGVFGILISLGIYFAYDWSRLIVKAAPTYWAFFVPAAILAVFLVVDYFVIRDTPSHAGHP DFDTADASSGETGPQLGVAGVLKRMLTNRAIIIILCIEFCSGFMRNAIMQWYPKFAKATGLGETFVAANWGMLLCVAGIT GGMFAGVISDRVFDSRRGPVSAVLYAGMSVGAVISVFVLESVALGWTVIFMSLCVIGVHGMLSGTASMDFGGKKNAGLAV GIIDGAVYAGTALQSILLGSILPMGDEAKTAANWGNWPYAMLPLSFLGLLLATQVWNARPQPKSTPVPATLPVPSEAPAN RTGTGG
Specific function: Responsible for glycerol-3-phosphate uptake [H]
COG id: COG2271
COG function: function code G; Sugar phosphate permease
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Organophosphate:Pi antiporter (OPA) (TC 2.A.1.4) family [H]
Homologues:
Organism=Escherichia coli, GI87082310, Length=419, Percent_Identity=23.3890214797136, Blast_Score=72, Evalue=5e-14, Organism=Escherichia coli, GI1788573, Length=399, Percent_Identity=22.8070175438596, Blast_Score=69, Evalue=9e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005267 - InterPro: IPR000849 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR021159 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 51771; Mature: 51640
Theoretical pI: Translated: 9.60; Mature: 9.60
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSLPPWLAQFLPILILLGAIGLVLTRLPKVELGHSEAFKRRRFFNWFPLGMTYAFLYMG CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHC RYNLNVATSAMGDRTSNADFGTIFAWGTAVYGVAFLLNGPLTDKLGGRKTILMAAAGSAV CCCCCEEHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCHHH ANVAMGGVVYAVLTHNWAPPGGLVATLSFLYAVNMYFQSFGAVSIVKVNAAWFHVRERGL HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHCCH LGGVFGILISLGIYFAYDWSRLIVKAAPTYWAFFVPAAILAVFLVVDYFVIRDTPSHAGH HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC PDFDTADASSGETGPQLGVAGVLKRMLTNRAIIIILCIEFCSGFMRNAIMQWYPKFAKAT CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHC GLGETFVAANWGMLLCVAGITGGMFAGVISDRVFDSRRGPVSAVLYAGMSVGAVISVFVL CCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCHHHHHHHHHHHH ESVALGWTVIFMSLCVIGVHGMLSGTASMDFGGKKNAGLAVGIIDGAVYAGTALQSILLG HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHH SILPMGDEAKTAANWGNWPYAMLPLSFLGLLLATQVWNARPQPKSTPVPATLPVPSEAPA HHCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC NRTGTGG CCCCCCC >Mature Secondary Structure SSLPPWLAQFLPILILLGAIGLVLTRLPKVELGHSEAFKRRRFFNWFPLGMTYAFLYMG CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHC RYNLNVATSAMGDRTSNADFGTIFAWGTAVYGVAFLLNGPLTDKLGGRKTILMAAAGSAV CCCCCEEHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCHHH ANVAMGGVVYAVLTHNWAPPGGLVATLSFLYAVNMYFQSFGAVSIVKVNAAWFHVRERGL HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHCCH LGGVFGILISLGIYFAYDWSRLIVKAAPTYWAFFVPAAILAVFLVVDYFVIRDTPSHAGH HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC PDFDTADASSGETGPQLGVAGVLKRMLTNRAIIIILCIEFCSGFMRNAIMQWYPKFAKAT CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHC GLGETFVAANWGMLLCVAGITGGMFAGVISDRVFDSRRGPVSAVLYAGMSVGAVISVFVL CCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCHHHHHHHHHHHH ESVALGWTVIFMSLCVIGVHGMLSGTASMDFGGKKNAGLAVGIIDGAVYAGTALQSILLG HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHH SILPMGDEAKTAANWGNWPYAMLPLSFLGLLLATQVWNARPQPKSTPVPATLPVPSEAPA HHCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC NRTGTGG CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8012593; 9384377 [H]