| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108757749
Identifier: 108757749
GI number: 108757749
Start: 2971738
End: 2972703
Strand: Reverse
Name: 108757749
Synonym: MXAN_2552
Alternate gene names: NA
Gene position: 2972703-2971738 (Counterclockwise)
Preceding gene: 108763129
Following gene: 108761921
Centisome position: 32.52
GC content: 64.29
Gene sequence:
>966_bases ATGGCCTGGCGAAGCTTGCGCTGTTGGGTAAGCCTCGCAGGAACTACGCGGGCACTTCATTTTGCACGCCCTTTCTTAGA CAATCGAACGAGCGTGGTAGCCTTTCCATTCATGGAAAGCTTTACTCTCAAGAAAGCACCGCTCCAGGTATGGGTGCTGA GCTACACGCTTCTGCTACCGGGATTGGCGCTCGGGCAAACCGTGACGGCCAAAGCCGCGCAAGCTAGTTCGCGCGACTCC TCGTTTCGCGCACGGCTGAAGGCGGCAGCGCAGCTCTATGAGGAACTTGAGTACGAGCAGGCGCTGAAGACGCTCACCCA GGCCAAGGCACTGGCCACGACGGACGACGAACGGGCAGACGCCGCGATGTACGAAGCCATCGTCCTCGCCGATCTCGGGA GACGCTCACAGTCCCTCCGCGCATTCCGCGAAGCCCTTTCACTTCAACCAGACTCCCAGCTCCCCGTCAGGGTCTCTCCC AAGGTGGCTCGGGACTTCGACGACGTACGCAAGAATCTCCAGAGCGAACGCGTGGCTTCGGCCCCCGTCGAGCCACCGCC CGCCCCTTCGCAGGACCGCCCCGTCCTCGAACCCGAGGGAACCGCGTTGGCCGTCGCTACACCATCACCTGCTGCGCCAA CCCCTTCACTCATCACCAGCGCCGAGCCCGAACTCATGGCACATGAGTCAACGGGCCTCCGCATCCGTCCCCTCCCCGTG GCCTTGCTTGGCGCAGGGGTGCTCGCGGGTGGCATCGGGAGCTACCTCGGCCTGCGCTCCCGGAGCGACATCCAGAGCGC GCGAGACACCTTCAGTATCGATGAGCAGATGGGACATCTGGACGCGGCGCGCGGCAAGGCGCTCGGCGCCAACATCTTGT TCGGTGTCGCGGCGACAGCGGCGGCGGGAGCGGTCATCACCTACTTCCTGGGTAACGAAGCCACGGCGCAGCGGGAGGCG CGATGA
Upstream 100 bases:
>100_bases CTCGGAATTCGAGGTGCTCGCGCCGGAAGCACTGCGAACGAAGCTCCTGAAACTGGCGACGGGCATCCTCGACACGCATC GAAGTGCCACTCCTTGACGC
Downstream 100 bases:
>100_bases ACCGCATTTTTCTGGCGTGCCTTGTTCTCCTGTCCGGCATGGCCTGCACCGTGCCCAGCCTCGACGAACTCCACCCATGT GACATCAATGACCTCATGGG
Product: TPR domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 321; Mature: 320
Protein sequence:
>321_residues MAWRSLRCWVSLAGTTRALHFARPFLDNRTSVVAFPFMESFTLKKAPLQVWVLSYTLLLPGLALGQTVTAKAAQASSRDS SFRARLKAAAQLYEELEYEQALKTLTQAKALATTDDERADAAMYEAIVLADLGRRSQSLRAFREALSLQPDSQLPVRVSP KVARDFDDVRKNLQSERVASAPVEPPPAPSQDRPVLEPEGTALAVATPSPAAPTPSLITSAEPELMAHESTGLRIRPLPV ALLGAGVLAGGIGSYLGLRSRSDIQSARDTFSIDEQMGHLDAARGKALGANILFGVAATAAAGAVITYFLGNEATAQREA R
Sequences:
>Translated_321_residues MAWRSLRCWVSLAGTTRALHFARPFLDNRTSVVAFPFMESFTLKKAPLQVWVLSYTLLLPGLALGQTVTAKAAQASSRDS SFRARLKAAAQLYEELEYEQALKTLTQAKALATTDDERADAAMYEAIVLADLGRRSQSLRAFREALSLQPDSQLPVRVSP KVARDFDDVRKNLQSERVASAPVEPPPAPSQDRPVLEPEGTALAVATPSPAAPTPSLITSAEPELMAHESTGLRIRPLPV ALLGAGVLAGGIGSYLGLRSRSDIQSARDTFSIDEQMGHLDAARGKALGANILFGVAATAAAGAVITYFLGNEATAQREA R >Mature_320_residues AWRSLRCWVSLAGTTRALHFARPFLDNRTSVVAFPFMESFTLKKAPLQVWVLSYTLLLPGLALGQTVTAKAAQASSRDSS FRARLKAAAQLYEELEYEQALKTLTQAKALATTDDERADAAMYEAIVLADLGRRSQSLRAFREALSLQPDSQLPVRVSPK VARDFDDVRKNLQSERVASAPVEPPPAPSQDRPVLEPEGTALAVATPSPAAPTPSLITSAEPELMAHESTGLRIRPLPVA LLGAGVLAGGIGSYLGLRSRSDIQSARDTFSIDEQMGHLDAARGKALGANILFGVAATAAAGAVITYFLGNEATAQREAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34366; Mature: 34235
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAWRSLRCWVSLAGTTRALHFARPFLDNRTSVVAFPFMESFTLKKAPLQVWVLSYTLLLP CCCCCEEEEEEECCHHHHHHHHHHHHCCCCCEEEECCHHHHHHCCCCHHHHHHHHHHHHC GLALGQTVTAKAAQASSRDSSFRARLKAAAQLYEELEYEQALKTLTQAKALATTDDERAD CHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH AAMYEAIVLADLGRRSQSLRAFREALSLQPDSQLPVRVSPKVARDFDDVRKNLQSERVAS HHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHC APVEPPPAPSQDRPVLEPEGTALAVATPSPAAPTPSLITSAEPELMAHESTGLRIRPLPV CCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHCCCCCCCEEECCCCCEEECCHH ALLGAGVLAGGIGSYLGLRSRSDIQSARDTFSIDEQMGHLDAARGKALGANILFGVAATA HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH AAGAVITYFLGNEATAQREAR HHHHHEEEECCCCCCHHCCCC >Mature Secondary Structure AWRSLRCWVSLAGTTRALHFARPFLDNRTSVVAFPFMESFTLKKAPLQVWVLSYTLLLP CCCCEEEEEEECCHHHHHHHHHHHHCCCCCEEEECCHHHHHHCCCCHHHHHHHHHHHHC GLALGQTVTAKAAQASSRDSSFRARLKAAAQLYEELEYEQALKTLTQAKALATTDDERAD CHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH AAMYEAIVLADLGRRSQSLRAFREALSLQPDSQLPVRVSPKVARDFDDVRKNLQSERVAS HHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHC APVEPPPAPSQDRPVLEPEGTALAVATPSPAAPTPSLITSAEPELMAHESTGLRIRPLPV CCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHCCCCCCCEEECCCCCEEECCHH ALLGAGVLAGGIGSYLGLRSRSDIQSARDTFSIDEQMGHLDAARGKALGANILFGVAATA HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH AAGAVITYFLGNEATAQREAR HHHHHEEEECCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA