Definition Myxococcus xanthus DK 1622 chromosome, complete genome.
Accession NC_008095
Length 9,139,763

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The map label for this gene is 108757682

Identifier: 108757682

GI number: 108757682

Start: 2250052

End: 2251524

Strand: Reverse

Name: 108757682

Synonym: MXAN_1921

Alternate gene names: NA

Gene position: 2251524-2250052 (Counterclockwise)

Preceding gene: 108757885

Following gene: 108756982

Centisome position: 24.63

GC content: 72.57

Gene sequence:

>1473_bases
GTGAGTCCTGGCCCGCGTCTTTCATGCGCCCGCGCGCTGACCTCCGTGGTGCTGGCCTCCAGCCTCTGGCTGTCCGCGTG
CGCCACCACACCCGCCGCCCCTCGGCCAACGCCCGAGGAGACCGCCGAGGACGCGGACTCCACCGCCACGACACCGCCGG
ACGCGGGCGCCACCACGGAGGCGCCGTCACCGCCCCTGTCCCGTCCGGAAGCGCCGCGCGGCCCCGAGCGCGACTTCGTC
GAGGCGGTGGAGATTGCGCGCCGGGGAGAGCTGACCGCGGCCGAAGCGGCGCTGCGCACCCTGGTCGAGCTGGACCCGAA
GCTGGACTACGCGTGGACGAACCTGGGCATCGTCCAGGAGCGGATGGGGAAGACCGCGGACGCGGAGCGCTCCTACCGCA
AGGCACTGGACGTGGCCCCCGAACAGCAGTCCGCGTGGGACTGCCTGGCGCGCCTGTATGGCCGCACCGGCCGCACGGCG
AAGCTGGAAGCCGAGCTGCGCGAGCGGCTGTCCTCCCAGCCGGACTCGGTCGCGCTGCGCACCGCGCTGGCCATCACCCT
GCTCCAGGCGAAGAACCACGCCGCCGCCTCGGCCGAGGCCAAGCAGGCGCTGAAGGGCGACGAGCGGCACGTGCGCGCCA
TGCAGGTGCTGGCGCAGGTCTACTACCGCGAGGGCAAGCACGAGCTGGCGCGCATGGTGCTGGAGAACGCCCGCGCCATC
GACCCGAAAGACGCGGCCACGCACAACGGGCTGGGGCTGGTGTACCTGGCGCTCGACTCGCGTCCCCAGGCCCTGGAGTC
CTTCAAGACGGCCGCGCAACTGCGGCCGGACTTCGCGGAGGCGCGCAACAACTTCGGCGCCATGCTCAACGAGGCGCAGG
ACTACGCGGCCGCCGTCACCGAACTGGAGGCAGCGGTGCGCGCCGCGCCGGACTTCGCGTCGGCCCGCCTCAACCTGGGC
AACGCCCACCGGGGCCAGGGGAACTTCGCGCGGGCCCGCGCCGAGTACGAGCAGGTGCTGCTGCTGATGCCGCGCGCCGC
GGATGCGTACTTCAACCTGGCCATCCTCTACCTCGACGTGGAGCCGCCGGGCATGGAGCCGCTGAAGCGCTACAAGACGG
CCCTCACCCACTTCGACAACTACCAGGCGCGCGGCGGACGCGACGAACGCATCGCCCAGTACATGAAGGACGCGCGCAAG
CTCATCGACCGCGAGGAGCGGCGACTGGAGCGCGAGCAGAAGGACCAGCTCCGAAAGGCCACCGAGGCGCAGAAAGCCGC
CGAGGCCAGCCCCCCCGAGGGAACACCGCCCGCCCCTTCGGTGTCCAACCCGGAGCCGGGCACGCGCGTCGCGGCGCCTG
ACGCCTCACCTTCCACCACCTCCGCCCCAAGCAGCCCGGCACCGTCACCGGACGGCGCGTCCGCTGCCCCGGTGCCCACC
GGCTCGGGTAGACTCACCGCCGACTCACAGTAA

Upstream 100 bases:

>100_bases
CCGCGGACGCCACCTACCCGGATGGGCTGGTGGGCAGCATCACCGGCCCCGTGCGCTCGACGCAGCAAGAGGGCCCGCGC
CTGTCCGGGGAGGGAGCGAA

Downstream 100 bases:

>100_bases
ATCCGCCATGCGCTCCGCCTTCGCCCTCATCGTGCTGCTCGCCGCCGCGCCCGTCCTGGCCCAGGACGCCAGTCAGGCCT
CCTCGTCCAGCAGCGGCGCC

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: Tetratricopeptide TPR_2 Repeat Protein; Tetratricopeptide Repeat Family; Tetratricopeptide TPR_1 Repeat-Containing Protein; TPR Repeat Protein; Adventurous Gliding Protein T; Tetratricopeptide Repeat-Containing Protein; TPR Domain-Containing Protein; Tetratricopeptide Repeat Domain Protein; Tetratricopeptide Repeat Family Protein; TPR Domain Protein; Methyltransferase Type; Peptidase S1 And S6 Chymotrypsin/Hap; Adventurous Gliding Motility Protein AglT; Tetratricopeptide Repeat Protein; Peptidase; Adventurous Gliding Motility Protein T

Number of amino acids: Translated: 490; Mature: 489

Protein sequence:

>490_residues
MSPGPRLSCARALTSVVLASSLWLSACATTPAAPRPTPEETAEDADSTATTPPDAGATTEAPSPPLSRPEAPRGPERDFV
EAVEIARRGELTAAEAALRTLVELDPKLDYAWTNLGIVQERMGKTADAERSYRKALDVAPEQQSAWDCLARLYGRTGRTA
KLEAELRERLSSQPDSVALRTALAITLLQAKNHAAASAEAKQALKGDERHVRAMQVLAQVYYREGKHELARMVLENARAI
DPKDAATHNGLGLVYLALDSRPQALESFKTAAQLRPDFAEARNNFGAMLNEAQDYAAAVTELEAAVRAAPDFASARLNLG
NAHRGQGNFARARAEYEQVLLLMPRAADAYFNLAILYLDVEPPGMEPLKRYKTALTHFDNYQARGGRDERIAQYMKDARK
LIDREERRLEREQKDQLRKATEAQKAAEASPPEGTPPAPSVSNPEPGTRVAAPDASPSTTSAPSSPAPSPDGASAAPVPT
GSGRLTADSQ

Sequences:

>Translated_490_residues
MSPGPRLSCARALTSVVLASSLWLSACATTPAAPRPTPEETAEDADSTATTPPDAGATTEAPSPPLSRPEAPRGPERDFV
EAVEIARRGELTAAEAALRTLVELDPKLDYAWTNLGIVQERMGKTADAERSYRKALDVAPEQQSAWDCLARLYGRTGRTA
KLEAELRERLSSQPDSVALRTALAITLLQAKNHAAASAEAKQALKGDERHVRAMQVLAQVYYREGKHELARMVLENARAI
DPKDAATHNGLGLVYLALDSRPQALESFKTAAQLRPDFAEARNNFGAMLNEAQDYAAAVTELEAAVRAAPDFASARLNLG
NAHRGQGNFARARAEYEQVLLLMPRAADAYFNLAILYLDVEPPGMEPLKRYKTALTHFDNYQARGGRDERIAQYMKDARK
LIDREERRLEREQKDQLRKATEAQKAAEASPPEGTPPAPSVSNPEPGTRVAAPDASPSTTSAPSSPAPSPDGASAAPVPT
GSGRLTADSQ
>Mature_489_residues
SPGPRLSCARALTSVVLASSLWLSACATTPAAPRPTPEETAEDADSTATTPPDAGATTEAPSPPLSRPEAPRGPERDFVE
AVEIARRGELTAAEAALRTLVELDPKLDYAWTNLGIVQERMGKTADAERSYRKALDVAPEQQSAWDCLARLYGRTGRTAK
LEAELRERLSSQPDSVALRTALAITLLQAKNHAAASAEAKQALKGDERHVRAMQVLAQVYYREGKHELARMVLENARAID
PKDAATHNGLGLVYLALDSRPQALESFKTAAQLRPDFAEARNNFGAMLNEAQDYAAAVTELEAAVRAAPDFASARLNLGN
AHRGQGNFARARAEYEQVLLLMPRAADAYFNLAILYLDVEPPGMEPLKRYKTALTHFDNYQARGGRDERIAQYMKDARKL
IDREERRLEREQKDQLRKATEAQKAAEASPPEGTPPAPSVSNPEPGTRVAAPDASPSTTSAPSSPAPSPDGASAAPVPTG
SGRLTADSQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI32307150, Length=267, Percent_Identity=30.3370786516854, Blast_Score=92, Evalue=1e-18,
Organism=Homo sapiens, GI32307148, Length=267, Percent_Identity=30.3370786516854, Blast_Score=92, Evalue=1e-18,
Organism=Homo sapiens, GI118766330, Length=201, Percent_Identity=27.8606965174129, Blast_Score=66, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI115532690, Length=267, Percent_Identity=29.2134831460674, Blast_Score=86, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI115532692, Length=267, Percent_Identity=29.2134831460674, Blast_Score=85, Evalue=9e-17,
Organism=Drosophila melanogaster, GI17647755, Length=267, Percent_Identity=29.5880149812734, Blast_Score=90, Evalue=3e-18,
Organism=Drosophila melanogaster, GI24585827, Length=267, Percent_Identity=29.5880149812734, Blast_Score=90, Evalue=3e-18,
Organism=Drosophila melanogaster, GI24585829, Length=267, Percent_Identity=29.5880149812734, Blast_Score=90, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52801; Mature: 52670

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPGPRLSCARALTSVVLASSLWLSACATTPAAPRPTPEETAEDADSTATTPPDAGATTE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCC
APSPPLSRPEAPRGPERDFVEAVEIARRGELTAAEAALRTLVELDPKLDYAWTNLGIVQE
CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
RMGKTADAERSYRKALDVAPEQQSAWDCLARLYGRTGRTAKLEAELRERLSSQPDSVALR
HHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEHHHHHHHHHCCCCCHHHHH
TALAITLLQAKNHAAASAEAKQALKGDERHVRAMQVLAQVYYREGKHELARMVLENARAI
HHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCC
DPKDAATHNGLGLVYLALDSRPQALESFKTAAQLRPDFAEARNNFGAMLNEAQDYAAAVT
CCCHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
ELEAAVRAAPDFASARLNLGNAHRGQGNFARARAEYEQVLLLMPRAADAYFNLAILYLDV
HHHHHHHHCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHCCEEEEEEEEEEC
EPPGMEPLKRYKTALTHFDNYQARGGRDERIAQYMKDARKLIDREERRLEREQKDQLRKA
CCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TEAQKAAEASPPEGTPPAPSVSNPEPGTRVAAPDASPSTTSAPSSPAPSPDGASAAPVPT
HHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GSGRLTADSQ
CCCCCCCCCC
>Mature Secondary Structure 
SPGPRLSCARALTSVVLASSLWLSACATTPAAPRPTPEETAEDADSTATTPPDAGATTE
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCC
APSPPLSRPEAPRGPERDFVEAVEIARRGELTAAEAALRTLVELDPKLDYAWTNLGIVQE
CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
RMGKTADAERSYRKALDVAPEQQSAWDCLARLYGRTGRTAKLEAELRERLSSQPDSVALR
HHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEHHHHHHHHHCCCCCHHHHH
TALAITLLQAKNHAAASAEAKQALKGDERHVRAMQVLAQVYYREGKHELARMVLENARAI
HHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCC
DPKDAATHNGLGLVYLALDSRPQALESFKTAAQLRPDFAEARNNFGAMLNEAQDYAAAVT
CCCHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
ELEAAVRAAPDFASARLNLGNAHRGQGNFARARAEYEQVLLLMPRAADAYFNLAILYLDV
HHHHHHHHCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHCCEEEEEEEEEEC
EPPGMEPLKRYKTALTHFDNYQARGGRDERIAQYMKDARKLIDREERRLEREQKDQLRKA
CCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TEAQKAAEASPPEGTPPAPSVSNPEPGTRVAAPDASPSTTSAPSSPAPSPDGASAAPVPT
HHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GSGRLTADSQ
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA