| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108757588
Identifier: 108757588
GI number: 108757588
Start: 4683209
End: 4685224
Strand: Reverse
Name: 108757588
Synonym: MXAN_3896
Alternate gene names: NA
Gene position: 4685224-4683209 (Counterclockwise)
Preceding gene: 108762375
Following gene: 108759825
Centisome position: 51.26
GC content: 65.82
Gene sequence:
>2016_bases ATGTCTGGACCTCTGCGTCGAGATGCCTCATGTCCTCCCCGTGCATTCCCCCGTGGCTCCAAGCTCGTGGCTGCACTCGC CCTCCTGTCGTCCTGCGCGGCGCCCGTCGAGCGCGGTCCCGCAAAGCCTGGCGCCACCCTGTTCCTCGGGAAGGTGCTCA CCATGGACGACAGTGGGACGGTCGCTGGCGCCGTGCTGGTGGATGAGCGAGGCCAGATCCTGAAGGTCGGCACCGCGGAC GAGGTGCAGAAGGGCCTGGACACCTCGGTGCAAATCGTCCAGCTCGCGCCCGGGCAGGTCTTGATGCCGGGCTTCTTTGA TCCGCACCTGCATTTCATGCCCACGCTCCTTCAGAGCACGCTGGGCACCCACGACCTGGCGCCCTGCCTGCCTCCTCCCT ACAGGGTGGATCCGTCCGTGGACTGCAAGGCCCGTAGCGAAGTGCTGGGCGCGCTCTCCGCGATGGCGCTGGAGGGCACG AGTGCCGTCGGCGGCAACGCCTTCGTCCTGGGGATGAACCTGGACCCGTCGAGGCAGGTGTTCGACAACACGAAGGGGTG CGGGGTGGGTGGACCTTCGCCCTTCACGGCGCAGCCGAAGTTCTACATCGAGGCGTGCGTGAGCAAGGATCGTCCGGTGA TCATCCTGGATCAGTCGGGACACCTGGGCTACGTGAACCAGAAGGCCTTCGATGTCGTCTGTGGCGTTCAGAACGCCAAC GCCAACACCTGTACGATCCCCGATTCCGTCAAGAGTGGCGGCGGCGACTGGGTCACGGATTCGGCGAAGAACTTCGTGGG CCTGCTTCAGGAGCCTTCCGCGTTCGGGCCGTTCCTGACGGCGTTGCAGAAGAACCTGCCCGTGGCGCAGGTGTTCTCCG ATCCGGTCAAGTTCGCGGAGACGGGGGGCGCGGACGTCGAGCGCGTCATTCGGGGGCTGCGCGACGCGGGCGTCACCACC ATCGCGGACGGCGGCCTCCAATCGGTGGCGCAGATCAACGCGGTGAAGCGGTTCACCGAGCTGCCCGGTTTTCCCTTCCG AATCACGGGCGTCGTGGTCGCCGAGGCCGCGAAGACAGCGAAGCTGAAGCCGACGGCTCCTGCCTGTGAGCCGAAGGCAG GGAATGACTGCGCGCTGCCGAAGTGGCTGGGCGCCGGTGGCATCAAGGTCTGGGTCGACGGCTCGACGCAAGGTTGCACC GCGAAGCTCGAGGCGCCCTACCACTACCTGGCCGGCGGGCACTGCTCGGGTGATGGCGAGGGCCGGGCCGACTACGACAA CGTGCAGGCGCTCACCGAGGATTTGAGCGAACTCTGGACCCAGGGCGATTGGCGGTTCCAGCTCCACGCCAACGGCAATG GGGCGAACAACTGGGCGATCGATGCGCTGTCTCGGCTCCAGCAGACGAAGACGAACACGCGCCCCGTCCTCCTCATCCAC AACACGGTGGGCCGGCCCGCGATTTCCAAGCGCATCGGTGACCTGCGCAATGGTGCGGGGGTGATGGATACGAAGCCGGT ACCGACGCTCGACGTCCAGGTGACGCACCTCATTGGACACGTGGCGTATTGGGGTGATGCCTTCGTGGGAATGCTGGGGC ACGAGGCCGCGAGCGAGATCGATCCGATCGCCTATGACCGTGAGAACAAGATCCCGTTCTCGCTCCACAGCGATTCGATG GTGACGCCGACGCGTCCGCTCTGGTTCGTGGAGCAGGCCGTCACGCGGCGCACCTGGTCCTATCCGGACTTCTCGAAGGA GTACGTGCTGGGCGCCAAGCACGCGGCGACCGTCGATGAGGCGCTGCGCGCGATTACCATCGTGCCGGCCCGTCACCATG AGCTCGACAAGCTGATTGGCAGCATCGAGCAAGGCAAGGTGGCTGACTTCGTCGTGCTGAGCGCCAACCCGCTCGATTTC GACCCGGCCAACGGGGGAGACCCGACGAAGATCAGCCAGATTCAGGTGCTCCAGACGTACCTCAACGGACGGCCCACCAG CGGCAGCCAGCACTGA
Upstream 100 bases:
>100_bases CGTCGGACGATGTCTTGACGCGTCTGTTTTTGCTCCTTTGGTGTGTGTGGGTTTGATTGAATTTCTGTGTATGGTGTCTC ACCTCATTTAAAGGAGTCCT
Downstream 100 bases:
>100_bases TTAGCGCTCAAGCGCCCAGTCCAGACGCCTCCCACAGGGGACTCCTGTGGGAGGCGTCTGATTTCATACTGAACGGACCG CGTGCCCACCGGATGCTCCT
Product: putative lipoprotein
Products: NA
Alternate protein names: Amidohydrolase Family Protein; Amidohydrolase Family; Amidohydrolase Domain-Containing Protein; Amidohydrolase; Twin-Arginine Translocation Pathway Signal; Metal-Dependent Amidohydrolase; Amidohydrolase-Like; Lipoprotein; Amidase; Amidohydrolase Domain Protein; Exo Regulatory Protein AepA; Exos Regulatory Protein AepA; Hydrolase; Metal Dependent Amidohydrolase; Exo Regulatory Protein; AmidohydrolaseAmidohydrolase-Like; Periplasmic Metal-Dependent Aminohydolase Protein; Twin-Arginine Translocation Pathway Signal Protein
Number of amino acids: Translated: 671; Mature: 670
Protein sequence:
>671_residues MSGPLRRDASCPPRAFPRGSKLVAALALLSSCAAPVERGPAKPGATLFLGKVLTMDDSGTVAGAVLVDERGQILKVGTAD EVQKGLDTSVQIVQLAPGQVLMPGFFDPHLHFMPTLLQSTLGTHDLAPCLPPPYRVDPSVDCKARSEVLGALSAMALEGT SAVGGNAFVLGMNLDPSRQVFDNTKGCGVGGPSPFTAQPKFYIEACVSKDRPVIILDQSGHLGYVNQKAFDVVCGVQNAN ANTCTIPDSVKSGGGDWVTDSAKNFVGLLQEPSAFGPFLTALQKNLPVAQVFSDPVKFAETGGADVERVIRGLRDAGVTT IADGGLQSVAQINAVKRFTELPGFPFRITGVVVAEAAKTAKLKPTAPACEPKAGNDCALPKWLGAGGIKVWVDGSTQGCT AKLEAPYHYLAGGHCSGDGEGRADYDNVQALTEDLSELWTQGDWRFQLHANGNGANNWAIDALSRLQQTKTNTRPVLLIH NTVGRPAISKRIGDLRNGAGVMDTKPVPTLDVQVTHLIGHVAYWGDAFVGMLGHEAASEIDPIAYDRENKIPFSLHSDSM VTPTRPLWFVEQAVTRRTWSYPDFSKEYVLGAKHAATVDEALRAITIVPARHHELDKLIGSIEQGKVADFVVLSANPLDF DPANGGDPTKISQIQVLQTYLNGRPTSGSQH
Sequences:
>Translated_671_residues MSGPLRRDASCPPRAFPRGSKLVAALALLSSCAAPVERGPAKPGATLFLGKVLTMDDSGTVAGAVLVDERGQILKVGTAD EVQKGLDTSVQIVQLAPGQVLMPGFFDPHLHFMPTLLQSTLGTHDLAPCLPPPYRVDPSVDCKARSEVLGALSAMALEGT SAVGGNAFVLGMNLDPSRQVFDNTKGCGVGGPSPFTAQPKFYIEACVSKDRPVIILDQSGHLGYVNQKAFDVVCGVQNAN ANTCTIPDSVKSGGGDWVTDSAKNFVGLLQEPSAFGPFLTALQKNLPVAQVFSDPVKFAETGGADVERVIRGLRDAGVTT IADGGLQSVAQINAVKRFTELPGFPFRITGVVVAEAAKTAKLKPTAPACEPKAGNDCALPKWLGAGGIKVWVDGSTQGCT AKLEAPYHYLAGGHCSGDGEGRADYDNVQALTEDLSELWTQGDWRFQLHANGNGANNWAIDALSRLQQTKTNTRPVLLIH NTVGRPAISKRIGDLRNGAGVMDTKPVPTLDVQVTHLIGHVAYWGDAFVGMLGHEAASEIDPIAYDRENKIPFSLHSDSM VTPTRPLWFVEQAVTRRTWSYPDFSKEYVLGAKHAATVDEALRAITIVPARHHELDKLIGSIEQGKVADFVVLSANPLDF DPANGGDPTKISQIQVLQTYLNGRPTSGSQH >Mature_670_residues SGPLRRDASCPPRAFPRGSKLVAALALLSSCAAPVERGPAKPGATLFLGKVLTMDDSGTVAGAVLVDERGQILKVGTADE VQKGLDTSVQIVQLAPGQVLMPGFFDPHLHFMPTLLQSTLGTHDLAPCLPPPYRVDPSVDCKARSEVLGALSAMALEGTS AVGGNAFVLGMNLDPSRQVFDNTKGCGVGGPSPFTAQPKFYIEACVSKDRPVIILDQSGHLGYVNQKAFDVVCGVQNANA NTCTIPDSVKSGGGDWVTDSAKNFVGLLQEPSAFGPFLTALQKNLPVAQVFSDPVKFAETGGADVERVIRGLRDAGVTTI ADGGLQSVAQINAVKRFTELPGFPFRITGVVVAEAAKTAKLKPTAPACEPKAGNDCALPKWLGAGGIKVWVDGSTQGCTA KLEAPYHYLAGGHCSGDGEGRADYDNVQALTEDLSELWTQGDWRFQLHANGNGANNWAIDALSRLQQTKTNTRPVLLIHN TVGRPAISKRIGDLRNGAGVMDTKPVPTLDVQVTHLIGHVAYWGDAFVGMLGHEAASEIDPIAYDRENKIPFSLHSDSMV TPTRPLWFVEQAVTRRTWSYPDFSKEYVLGAKHAATVDEALRAITIVPARHHELDKLIGSIEQGKVADFVVLSANPLDFD PANGGDPTKISQIQVLQTYLNGRPTSGSQH
Specific function: Unknown
COG id: COG1574
COG function: function code R; Predicted metal-dependent hydrolase with the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 71286; Mature: 71154
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGPLRRDASCPPRAFPRGSKLVAALALLSSCAAPVERGPAKPGATLFLGKVLTMDDSGT CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHCCCCCCCCEEEEEEEEEECCCCC VAGAVLVDERGQILKVGTADEVQKGLDTSVQIVQLAPGQVLMPGFFDPHLHFMPTLLQST EEEEEEEECCCCEEEECCHHHHHHCCCCCEEEEEECCCCEECCCCCCCHHHHHHHHHHHH LGTHDLAPCLPPPYRVDPSVDCKARSEVLGALSAMALEGTSAVGGNAFVLGMNLDPSRQV CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHH FDNTKGCGVGGPSPFTAQPKFYIEACVSKDRPVIILDQSGHLGYVNQKAFDVVCGVQNAN HCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCHHEEEEEECCCCC ANTCTIPDSVKSGGGDWVTDSAKNFVGLLQEPSAFGPFLTALQKNLPVAQVFSDPVKFAE CCEEECCHHHHCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHCHHHHHH TGGADVERVIRGLRDAGVTTIADGGLQSVAQINAVKRFTELPGFPFRITGVVVAEAAKTA CCCCCHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEHHHHHC KLKPTAPACEPKAGNDCALPKWLGAGGIKVWVDGSTQGCTAKLEAPYHYLAGGHCSGDGE CCCCCCCCCCCCCCCCCCCCHHHCCCCEEEEECCCCCCCEEEECCCEEECCCCEECCCCC GRADYDNVQALTEDLSELWTQGDWRFQLHANGNGANNWAIDALSRLQQTKTNTRPVLLIH CCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEE NTVGRPAISKRIGDLRNGAGVMDTKPVPTLDVQVTHLIGHVAYWGDAFVGMLGHEAASEI CCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHC DPIAYDRENKIPFSLHSDSMVTPTRPLWFVEQAVTRRTWSYPDFSKEYVLGAKHAATVDE CCCEECCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHEECCHHHHHHHH ALRAITIVPARHHELDKLIGSIEQGKVADFVVLSANPLDFDPANGGDPTKISQIQVLQTY HHHEEEEECCCHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHH LNGRPTSGSQH HCCCCCCCCCC >Mature Secondary Structure SGPLRRDASCPPRAFPRGSKLVAALALLSSCAAPVERGPAKPGATLFLGKVLTMDDSGT CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHCCCCCCCCEEEEEEEEEECCCCC VAGAVLVDERGQILKVGTADEVQKGLDTSVQIVQLAPGQVLMPGFFDPHLHFMPTLLQST EEEEEEEECCCCEEEECCHHHHHHCCCCCEEEEEECCCCEECCCCCCCHHHHHHHHHHHH LGTHDLAPCLPPPYRVDPSVDCKARSEVLGALSAMALEGTSAVGGNAFVLGMNLDPSRQV CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHH FDNTKGCGVGGPSPFTAQPKFYIEACVSKDRPVIILDQSGHLGYVNQKAFDVVCGVQNAN HCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCHHEEEEEECCCCC ANTCTIPDSVKSGGGDWVTDSAKNFVGLLQEPSAFGPFLTALQKNLPVAQVFSDPVKFAE CCEEECCHHHHCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHCHHHHHH TGGADVERVIRGLRDAGVTTIADGGLQSVAQINAVKRFTELPGFPFRITGVVVAEAAKTA CCCCCHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEHHHHHC KLKPTAPACEPKAGNDCALPKWLGAGGIKVWVDGSTQGCTAKLEAPYHYLAGGHCSGDGE CCCCCCCCCCCCCCCCCCCCHHHCCCCEEEEECCCCCCCEEEECCCEEECCCCEECCCCC GRADYDNVQALTEDLSELWTQGDWRFQLHANGNGANNWAIDALSRLQQTKTNTRPVLLIH CCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEE NTVGRPAISKRIGDLRNGAGVMDTKPVPTLDVQVTHLIGHVAYWGDAFVGMLGHEAASEI CCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHC DPIAYDRENKIPFSLHSDSMVTPTRPLWFVEQAVTRRTWSYPDFSKEYVLGAKHAATVDE CCCEECCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHEECCHHHHHHHH ALRAITIVPARHHELDKLIGSIEQGKVADFVVLSANPLDFDPANGGDPTKISQIQVLQTY HHHEEEEECCCHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHH LNGRPTSGSQH HCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA