| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
Click here to switch to the map view.
The map label for this gene is ydaO [H]
Identifier: 108757491
GI number: 108757491
Start: 1939675
End: 1941642
Strand: Reverse
Name: ydaO [H]
Synonym: MXAN_1636
Alternate gene names: 108757491
Gene position: 1941642-1939675 (Counterclockwise)
Preceding gene: 108758530
Following gene: 108762293
Centisome position: 21.24
GC content: 69.77
Gene sequence:
>1968_bases ATGTCCTTGTGGCGGGTCCTGTTCGGCAGGCCCATTCCGAACGAGCGAGCGGAAGAGGAGAGGATTGGTCCGCTGACAGG CATCCCCGTGCTCGGGCTGGACGCGTTGGCCTCCGCGGCCTACGGGCCCGAGGCCGCGCTCACCGCCATGCTCGTGCTGG GCAGCGCCGGGCCGCGGTACATCGGCCTGCTCACCGGCATCATCGTCGCGCTGCTGCTCGTGGTGCAGTTCTCCTACCGG CAGACCATCGCCGCGTATCCCGACGGCGGCGGCTCGTTCTCCGTGGCCCGCGCCAACCTGGGCGTGAGGCCCGCGCTGCT CGCGGCCTCCGCGCTGGCGTTGGATTACGTACTCAACGTCGCGGTGGCCATTTCCGCCGGCGTGGGCGCGCTCGTCTCCG CCATCCCCAGCCTGTTTCCCCACACCCTGCTCCTGTGCCTGCTGCTGCTCGGCTTCATCATGGTCGTGAACCTGCGAGGC ATCCGCACCGCGGGCTCGGCCTTCCTGCTACCGACCTACCTGTTCGTCGGCTGCCTGGGCATCACCCTGCTCATCGGCAT CTGGAAGGTGCTCACGTCCAATGGCAGCCCCGTGCCCGTCGTCGCCCCGCCCCGGCTCCCGGAGAGCACGGCCATGGCGA GCCTCTGGCTGTTGATGCATGCCTTCGCGAACGGCTGCACGGCGATGACGGGCATCGAGGCCGTCAGCAACGGCGTGCCC ATCTTCCGCGAACCCCGCGTGCGCAACGCGCGCCGGACGTTGCTGGGCATCGTGAGCATCCTGGTGATGCTGCTCTGCGG CGTGGCGTGGATGAGCCACGCCTATGACATTGGCGCGACCGCGCCGGGCCAGGCCGGCTACCAGAGCGTGCTGTCCCAGG TCGTGGCCGCCATCACCGGGCGCGGCGTCTTCTACTACGTGGCGCTGGCGGCCATCGTCTGTGTGCTCTGCCTGTCCGCC AACACGAGCTTCGCGGACTTCCCCCGCCTGTGCCGCGCGCTGGCGCTCGACAGCAACCTGCCTCCGGCCTTCGCCCACGT GGGCCAGCGCCTCGTGTATTCCACGGGCATCGTCACCCTGTCCCTGCTGGCCGCCGTGCTTCTGGTCCTGTTCAACGGCG TGACGGACCACCTCATCCCACTGTTCGCGGTGGGGGCGCTGTCCGCCTTCACCTTGTCCCAGCTCGGCATGGTCATGCAC TGGCGGCGCATGAGCGGACGCGGCGCGCGGAGGTTCCAGTGGGTGAATGGCGTGGGCGCGGCCTGCACCGCCCTGGCGCT GGCCGTGGTGGCGACGGCCAAGTTCGAGGAGGGCGCCTGGCTGACCGTCGTCTTCATTCCCCTGACCTACGTGCTGCTCC GGACCTCGCGGCGCCACGCCGAGCGCATCCACGCCGCCACCGAGACGCCCCACCCCATTCCCGTGCAGCCGCTCGCCGCG CCCGTGGTGGTGGTGCCCCTCCGGCGCCTGGACCGGGTGGCGCAGAAGGGCCTGCGGCTGGCCCTGTCCATGTCCCCGGA TGTGTACGCCGTGCAGGTCCGAGGACAACCGGACGCCCAGGAGCAATTGGTGCAGCGCTGGGAGTGGCAGGTGGCCGCGC CCCTTCGGAAGGCCGGACGGCCGGTGCCACGACTGGACGTGCTCGTGCCGACCTACCGCCAGGTCGTGGACCCGTTGCTG GGCTACGTCCGGAAGCTCGCCGCGGAGCATCCGGGCCGGTTCATCGCGGTGCTGGTGCCAGAGCTCGTCGAGCGCCGATG GCACCACTTCATCATCCCCAGCCACACCGCCACGCTGTTGAAGATGATGCTCCTGGTTCGCGGAGGGCCCCACATCGTCG TCATCAACACGCCCTGGTACCTGCGCGAGCCGTCGGGCCGGAAGAGACGCCTCCGACGAGGTTCTGCATGCGGACGACCA GGTTCTTGTCGCGGCGCCCCAGCGTGCTCGCATCATCCGTGGGAATGA
Upstream 100 bases:
>100_bases ATGACGAGGGTGCGCAGCACGCAGGAACTTTCCAAGTAAGGCCGGGCGCAAGGCCCGTCGCCTGTCGAAGCCCCCGGAGA CGCGGCACTACCTTTCAGGC
Downstream 100 bases:
>100_bases CGTAGCCCCCGTCGAATCTGACCTCGCCCGGCGTGGGCCCCGTGTGCCGCTCGACACGCCCTCCACTCGGCCCTGGAATC CCACACGCGGCACGCGGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 655; Mature: 654
Protein sequence:
>655_residues MSLWRVLFGRPIPNERAEEERIGPLTGIPVLGLDALASAAYGPEAALTAMLVLGSAGPRYIGLLTGIIVALLLVVQFSYR QTIAAYPDGGGSFSVARANLGVRPALLAASALALDYVLNVAVAISAGVGALVSAIPSLFPHTLLLCLLLLGFIMVVNLRG IRTAGSAFLLPTYLFVGCLGITLLIGIWKVLTSNGSPVPVVAPPRLPESTAMASLWLLMHAFANGCTAMTGIEAVSNGVP IFREPRVRNARRTLLGIVSILVMLLCGVAWMSHAYDIGATAPGQAGYQSVLSQVVAAITGRGVFYYVALAAIVCVLCLSA NTSFADFPRLCRALALDSNLPPAFAHVGQRLVYSTGIVTLSLLAAVLLVLFNGVTDHLIPLFAVGALSAFTLSQLGMVMH WRRMSGRGARRFQWVNGVGAACTALALAVVATAKFEEGAWLTVVFIPLTYVLLRTSRRHAERIHAATETPHPIPVQPLAA PVVVVPLRRLDRVAQKGLRLALSMSPDVYAVQVRGQPDAQEQLVQRWEWQVAAPLRKAGRPVPRLDVLVPTYRQVVDPLL GYVRKLAAEHPGRFIAVLVPELVERRWHHFIIPSHTATLLKMMLLVRGGPHIVVINTPWYLREPSGRKRRLRRGSACGRP GSCRGAPACSHHPWE
Sequences:
>Translated_655_residues MSLWRVLFGRPIPNERAEEERIGPLTGIPVLGLDALASAAYGPEAALTAMLVLGSAGPRYIGLLTGIIVALLLVVQFSYR QTIAAYPDGGGSFSVARANLGVRPALLAASALALDYVLNVAVAISAGVGALVSAIPSLFPHTLLLCLLLLGFIMVVNLRG IRTAGSAFLLPTYLFVGCLGITLLIGIWKVLTSNGSPVPVVAPPRLPESTAMASLWLLMHAFANGCTAMTGIEAVSNGVP IFREPRVRNARRTLLGIVSILVMLLCGVAWMSHAYDIGATAPGQAGYQSVLSQVVAAITGRGVFYYVALAAIVCVLCLSA NTSFADFPRLCRALALDSNLPPAFAHVGQRLVYSTGIVTLSLLAAVLLVLFNGVTDHLIPLFAVGALSAFTLSQLGMVMH WRRMSGRGARRFQWVNGVGAACTALALAVVATAKFEEGAWLTVVFIPLTYVLLRTSRRHAERIHAATETPHPIPVQPLAA PVVVVPLRRLDRVAQKGLRLALSMSPDVYAVQVRGQPDAQEQLVQRWEWQVAAPLRKAGRPVPRLDVLVPTYRQVVDPLL GYVRKLAAEHPGRFIAVLVPELVERRWHHFIIPSHTATLLKMMLLVRGGPHIVVINTPWYLREPSGRKRRLRRGSACGRP GSCRGAPACSHHPWE >Mature_654_residues SLWRVLFGRPIPNERAEEERIGPLTGIPVLGLDALASAAYGPEAALTAMLVLGSAGPRYIGLLTGIIVALLLVVQFSYRQ TIAAYPDGGGSFSVARANLGVRPALLAASALALDYVLNVAVAISAGVGALVSAIPSLFPHTLLLCLLLLGFIMVVNLRGI RTAGSAFLLPTYLFVGCLGITLLIGIWKVLTSNGSPVPVVAPPRLPESTAMASLWLLMHAFANGCTAMTGIEAVSNGVPI FREPRVRNARRTLLGIVSILVMLLCGVAWMSHAYDIGATAPGQAGYQSVLSQVVAAITGRGVFYYVALAAIVCVLCLSAN TSFADFPRLCRALALDSNLPPAFAHVGQRLVYSTGIVTLSLLAAVLLVLFNGVTDHLIPLFAVGALSAFTLSQLGMVMHW RRMSGRGARRFQWVNGVGAACTALALAVVATAKFEEGAWLTVVFIPLTYVLLRTSRRHAERIHAATETPHPIPVQPLAAP VVVVPLRRLDRVAQKGLRLALSMSPDVYAVQVRGQPDAQEQLVQRWEWQVAAPLRKAGRPVPRLDVLVPTYRQVVDPLLG YVRKLAAEHPGRFIAVLVPELVERRWHHFIIPSHTATLLKMMLLVRGGPHIVVINTPWYLREPSGRKRRLRRGSACGRPG SCRGAPACSHHPWE
Specific function: Unknown
COG id: COG0531
COG function: function code E; Amino acid transporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002293 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 70422; Mature: 70291
Theoretical pI: Translated: 10.65; Mature: 10.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLWRVLFGRPIPNERAEEERIGPLTGIPVLGLDALASAAYGPEAALTAMLVLGSAGPRY CCHHHHHHCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHH IGLLTGIIVALLLVVQFSYRQTIAAYPDGGGSFSVARANLGVRPALLAASALALDYVLNV HHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH AVAISAGVGALVSAIPSLFPHTLLLCLLLLGFIMVVNLRGIRTAGSAFLLPTYLFVGCLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH ITLLIGIWKVLTSNGSPVPVVAPPRLPESTAMASLWLLMHAFANGCTAMTGIEAVSNGVP HHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCC IFREPRVRNARRTLLGIVSILVMLLCGVAWMSHAYDIGATAPGQAGYQSVLSQVVAAITG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHC RGVFYYVALAAIVCVLCLSANTSFADFPRLCRALALDSNLPPAFAHVGQRLVYSTGIVTL CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH SLLAAVLLVLFNGVTDHLIPLFAVGALSAFTLSQLGMVMHWRRMSGRGARRFQWVNGVGA HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCHH ACTALALAVVATAKFEEGAWLTVVFIPLTYVLLRTSRRHAERIHAATETPHPIPVQPLAA HHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC PVVVVPLRRLDRVAQKGLRLALSMSPDVYAVQVRGQPDAQEQLVQRWEWQVAAPLRKAGR CHHHHHHHHHHHHHHHCCEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCC PVPRLDVLVPTYRQVVDPLLGYVRKLAAEHPGRFIAVLVPELVERRWHHFIIPSHTATLL CCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCEEECCCHHHHHH KMMLLVRGGPHIVVINTPWYLREPSGRKRRLRRGSACGRPGSCRGAPACSHHPWE HHHHHHCCCCEEEEECCCEEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SLWRVLFGRPIPNERAEEERIGPLTGIPVLGLDALASAAYGPEAALTAMLVLGSAGPRY CHHHHHHCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHH IGLLTGIIVALLLVVQFSYRQTIAAYPDGGGSFSVARANLGVRPALLAASALALDYVLNV HHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH AVAISAGVGALVSAIPSLFPHTLLLCLLLLGFIMVVNLRGIRTAGSAFLLPTYLFVGCLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH ITLLIGIWKVLTSNGSPVPVVAPPRLPESTAMASLWLLMHAFANGCTAMTGIEAVSNGVP HHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCC IFREPRVRNARRTLLGIVSILVMLLCGVAWMSHAYDIGATAPGQAGYQSVLSQVVAAITG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHC RGVFYYVALAAIVCVLCLSANTSFADFPRLCRALALDSNLPPAFAHVGQRLVYSTGIVTL CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH SLLAAVLLVLFNGVTDHLIPLFAVGALSAFTLSQLGMVMHWRRMSGRGARRFQWVNGVGA HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCHH ACTALALAVVATAKFEEGAWLTVVFIPLTYVLLRTSRRHAERIHAATETPHPIPVQPLAA HHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC PVVVVPLRRLDRVAQKGLRLALSMSPDVYAVQVRGQPDAQEQLVQRWEWQVAAPLRKAGR CHHHHHHHHHHHHHHHCCEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCC PVPRLDVLVPTYRQVVDPLLGYVRKLAAEHPGRFIAVLVPELVERRWHHFIIPSHTATLL CCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCEEECCCHHHHHH KMMLLVRGGPHIVVINTPWYLREPSGRKRRLRRGSACGRPGSCRGAPACSHHPWE HHHHHHCCCCEEEEECCCEEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]