| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is yccK [H]
Identifier: 108757429
GI number: 108757429
Start: 357157
End: 358167
Strand: Reverse
Name: yccK [H]
Synonym: MXAN_0303
Alternate gene names: 108757429
Gene position: 358167-357157 (Counterclockwise)
Preceding gene: 108757104
Following gene: 108762985
Centisome position: 3.92
GC content: 69.54
Gene sequence:
>1011_bases ATGGAGACTCGGAAGCTGGGAAGGCAGGGCCCCACCGTTTCGGCGCTGGGCCTGGGCTGCATGGGGATGTCCGACTTCTA CGCGGGCAGGGATGACGCGGAGTCGGAGGCCACGCTGCTGCACGCGCTGGAGCGGGGCATCACCTTCTTCGACACCGCCG ACATGTACGGGTCGGGCGCCAACGAGACGTTGGTGGGCCGGGTGCTCAAGCCGCACCGGGCGAACATCGTGCTGGCAACG AAGTTCGGCATCGTCCGCGACCCCACGGACCCGCAGAAGCGCGGCATCAACGGGCGGCCGGAGTACGTGAGGCAAGCTTG CGAGGCCAGCCTGCGCCGGCTGGGCGTGGATGTCATCGACCTGTACTACCTGCACCGGCTGGACGTGCAGACGCCCATCG AGGACACGGTGGGCGCCATGGCGGAGCTGGTGCGCGAGGGCAAGGTGCGCTTCCTCGGCCTGTCGGAGGTGGACGCGGAC ACGCTGCGCCGGGCCTCGAAGGTGCATCCCATCACCGCGCTCCAGAGCGAGTACTCCCTGTGGAGCCGTGAGCCGGAAGA CGGCGTGCTCCAGGCGTGCCGCGAGCTGGGCGTGGGCTTCGTTCCCTACAGCCCGCTGGGACGCGGCTTCCTCACGGGGC AAATCAAGCGCTTCGAGGACCTGGCGCAGGACGACTACCGCCGCTTCTCGCCTCGCTTCCAGGGGGAGAACTTCACGCGC AACCTGGAGCTCGTCGGCCACATCGAGCGGCTGGCGAAGGAGAAGGGATGCACTCCGGCGCAGCTCGCGCTCGCGTGGGT GCTGGCACAGGGGAAGGACCTGGTGCCCATCCCCGGCACCAAGCGCCGCAAGTACCTGGACGAGAACCTCGGCGCGCTGG AGGTGACGCTCACGGACCAGGACGTGGCCGCCATCAACGCCGTCGCGCCTCCGGGCGTCGCCGCGGGTGGGCGCTATCCT CCGTCCATGCAGTCCTCGCTGCCCAAGGCGTCCCAGCCGCGCGGCCAGTGA
Upstream 100 bases:
>100_bases GCCCGTCAAGCCCCCTGACTGTCGTTTCCAGGCTCGAAGGTCATGCGAAGCCGGGAGTCTCCAGTTAGAGGGGCGTCACC ACGAGGAAGGAGCGAGGGAC
Downstream 100 bases:
>100_bases GATGAAGCGAGGCTGGGGGGTGCCCCTTCAGCTTCGAATACGAGGAAGCTGGGCGTGCGGCTGCCATGCGCCGTCGCCGC CCAGGCAGTAACGGCAGGTG
Product: aldo/keto reductase family oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 336; Mature: 336
Protein sequence:
>336_residues METRKLGRQGPTVSALGLGCMGMSDFYAGRDDAESEATLLHALERGITFFDTADMYGSGANETLVGRVLKPHRANIVLAT KFGIVRDPTDPQKRGINGRPEYVRQACEASLRRLGVDVIDLYYLHRLDVQTPIEDTVGAMAELVREGKVRFLGLSEVDAD TLRRASKVHPITALQSEYSLWSREPEDGVLQACRELGVGFVPYSPLGRGFLTGQIKRFEDLAQDDYRRFSPRFQGENFTR NLELVGHIERLAKEKGCTPAQLALAWVLAQGKDLVPIPGTKRRKYLDENLGALEVTLTDQDVAAINAVAPPGVAAGGRYP PSMQSSLPKASQPRGQ
Sequences:
>Translated_336_residues METRKLGRQGPTVSALGLGCMGMSDFYAGRDDAESEATLLHALERGITFFDTADMYGSGANETLVGRVLKPHRANIVLAT KFGIVRDPTDPQKRGINGRPEYVRQACEASLRRLGVDVIDLYYLHRLDVQTPIEDTVGAMAELVREGKVRFLGLSEVDAD TLRRASKVHPITALQSEYSLWSREPEDGVLQACRELGVGFVPYSPLGRGFLTGQIKRFEDLAQDDYRRFSPRFQGENFTR NLELVGHIERLAKEKGCTPAQLALAWVLAQGKDLVPIPGTKRRKYLDENLGALEVTLTDQDVAAINAVAPPGVAAGGRYP PSMQSSLPKASQPRGQ >Mature_336_residues METRKLGRQGPTVSALGLGCMGMSDFYAGRDDAESEATLLHALERGITFFDTADMYGSGANETLVGRVLKPHRANIVLAT KFGIVRDPTDPQKRGINGRPEYVRQACEASLRRLGVDVIDLYYLHRLDVQTPIEDTVGAMAELVREGKVRFLGLSEVDAD TLRRASKVHPITALQSEYSLWSREPEDGVLQACRELGVGFVPYSPLGRGFLTGQIKRFEDLAQDDYRRFSPRFQGENFTR NLELVGHIERLAKEKGCTPAQLALAWVLAQGKDLVPIPGTKRRKYLDENLGALEVTLTDQDVAAINAVAPPGVAAGGRYP PSMQSSLPKASQPRGQ
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI27436969, Length=324, Percent_Identity=28.0864197530864, Blast_Score=123, Evalue=3e-28, Organism=Homo sapiens, GI4504825, Length=321, Percent_Identity=28.0373831775701, Blast_Score=122, Evalue=3e-28, Organism=Homo sapiens, GI27436971, Length=324, Percent_Identity=29.9382716049383, Blast_Score=119, Evalue=4e-27, Organism=Homo sapiens, GI27436964, Length=324, Percent_Identity=27.7777777777778, Blast_Score=119, Evalue=4e-27, Organism=Homo sapiens, GI27436962, Length=324, Percent_Identity=27.7777777777778, Blast_Score=119, Evalue=4e-27, Organism=Homo sapiens, GI27436966, Length=324, Percent_Identity=27.7777777777778, Blast_Score=118, Evalue=9e-27, Organism=Homo sapiens, GI223718702, Length=318, Percent_Identity=31.1320754716981, Blast_Score=96, Evalue=7e-20, Organism=Homo sapiens, GI41327764, Length=277, Percent_Identity=31.0469314079422, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI41152114, Length=225, Percent_Identity=33.3333333333333, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI223718708, Length=161, Percent_Identity=36.6459627329193, Blast_Score=71, Evalue=1e-12, Organism=Escherichia coli, GI1788070, Length=323, Percent_Identity=33.7461300309598, Blast_Score=159, Evalue=3e-40, Organism=Escherichia coli, GI87081735, Length=331, Percent_Identity=33.2326283987915, Blast_Score=158, Evalue=5e-40, Organism=Escherichia coli, GI1789375, Length=329, Percent_Identity=30.0911854103343, Blast_Score=129, Evalue=3e-31, Organism=Escherichia coli, GI1787674, Length=307, Percent_Identity=27.0358306188925, Blast_Score=112, Evalue=3e-26, Organism=Escherichia coli, GI1789199, Length=349, Percent_Identity=29.7994269340974, Blast_Score=108, Evalue=7e-25, Organism=Escherichia coli, GI1788081, Length=301, Percent_Identity=27.5747508305648, Blast_Score=103, Evalue=2e-23, Organism=Saccharomyces cerevisiae, GI6325169, Length=341, Percent_Identity=27.8592375366569, Blast_Score=127, Evalue=2e-30, Organism=Saccharomyces cerevisiae, GI6325384, Length=302, Percent_Identity=29.8013245033113, Blast_Score=118, Evalue=2e-27, Organism=Saccharomyces cerevisiae, GI6323998, Length=351, Percent_Identity=24.7863247863248, Blast_Score=99, Evalue=9e-22, Organism=Saccharomyces cerevisiae, GI6319958, Length=304, Percent_Identity=24.3421052631579, Blast_Score=97, Evalue=5e-21, Organism=Saccharomyces cerevisiae, GI6319951, Length=309, Percent_Identity=24.9190938511327, Blast_Score=86, Evalue=7e-18, Organism=Saccharomyces cerevisiae, GI6322615, Length=258, Percent_Identity=25.1937984496124, Blast_Score=84, Evalue=5e-17, Organism=Drosophila melanogaster, GI45549126, Length=323, Percent_Identity=26.625386996904, Blast_Score=96, Evalue=3e-20, Organism=Drosophila melanogaster, GI24640980, Length=323, Percent_Identity=26.625386996904, Blast_Score=96, Evalue=5e-20, Organism=Drosophila melanogaster, GI24646155, Length=311, Percent_Identity=26.6881028938907, Blast_Score=81, Evalue=1e-15, Organism=Drosophila melanogaster, GI24646159, Length=225, Percent_Identity=29.3333333333333, Blast_Score=79, Evalue=5e-15, Organism=Drosophila melanogaster, GI24663317, Length=343, Percent_Identity=24.7813411078717, Blast_Score=77, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 36909; Mature: 36909
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METRKLGRQGPTVSALGLGCMGMSDFYAGRDDAESEATLLHALERGITFFDTADMYGSGA CCCHHCCCCCCCCHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHHCCEEEECHHHHCCCC NETLVGRVLKPHRANIVLATKFGIVRDPTDPQKRGINGRPEYVRQACEASLRRLGVDVID CHHHHHHHCCCCCCCEEEEEECCCEECCCCHHHCCCCCCHHHHHHHHHHHHHHHCCHHHH LYYLHRLDVQTPIEDTVGAMAELVREGKVRFLGLSEVDADTLRRASKVHPITALQSEYSL HHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHH WSREPEDGVLQACRELGVGFVPYSPLGRGFLTGQIKRFEDLAQDDYRRFSPRFQGENFTR HCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH NLELVGHIERLAKEKGCTPAQLALAWVLAQGKDLVPIPGTKRRKYLDENLGALEVTLTDQ HHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEECCCCCHHHHHHHCCCCEEEEEECCC DVAAINAVAPPGVAAGGRYPPSMQSSLPKASQPRGQ CHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCCC >Mature Secondary Structure METRKLGRQGPTVSALGLGCMGMSDFYAGRDDAESEATLLHALERGITFFDTADMYGSGA CCCHHCCCCCCCCHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHHCCEEEECHHHHCCCC NETLVGRVLKPHRANIVLATKFGIVRDPTDPQKRGINGRPEYVRQACEASLRRLGVDVID CHHHHHHHCCCCCCCEEEEEECCCEECCCCHHHCCCCCCHHHHHHHHHHHHHHHCCHHHH LYYLHRLDVQTPIEDTVGAMAELVREGKVRFLGLSEVDADTLRRASKVHPITALQSEYSL HHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHH WSREPEDGVLQACRELGVGFVPYSPLGRGFLTGQIKRFEDLAQDDYRRFSPRFQGENFTR HCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH NLELVGHIERLAKEKGCTPAQLALAWVLAQGKDLVPIPGTKRRKYLDENLGALEVTLTDQ HHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEECCCCCHHHHHHHCCCCEEEEEECCC DVAAINAVAPPGVAAGGRYPPSMQSSLPKASQPRGQ CHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9274031; 9384377; 9106203 [H]