| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108757407
Identifier: 108757407
GI number: 108757407
Start: 2543648
End: 2544349
Strand: Direct
Name: 108757407
Synonym: MXAN_2204
Alternate gene names: NA
Gene position: 2543648-2544349 (Clockwise)
Preceding gene: 108760440
Following gene: 108763057
Centisome position: 27.83
GC content: 68.52
Gene sequence:
>702_bases GTGGCAAGACGCCCACGACGGCCCGTTCCAATGCCACGCTCACTTGGGAAATCGACTCCGCCAGGCGCCGGGGCACCTCA CGTTCGCCACCACACTTGCCGCGGGAGGGACCTTTCGATGACCATGAATGCACCTCGGAGGAACTTCCACGTGGAGCCAC GACACAGGCCGGCACAGGCCATGGTCTCTCTCCCCTCGGACGTGCTGGAGCGGCTGCGAGAGGACCTGGCCCGTGCGGTG GCCCGGGTGTGTCCGCCTCGGATGGCCGATCGCCGCGATGACCTGGTGCAGACGGCCATGATGCGCGTCATGGAGTTGCA GCGGCGCGAGCCGGACCGCAGCCGGTTGACCCCCGCCTACCTGTATCGCGTCGCATACACGGCGCTGGTGGACGAGTTGC GCAACGTGTCACGCCGCCGTGAGGTCCAACTGGAAGAGGTGGAGTCGCTGTCCGAGCCGCCGGTGGCATCGAGCGACCCG GAGAAGGCCGCGGGCGGCTCCCAGATTGCCCAGGCCGTGCGCGACTGTCTGCGCAAGCTGGTCCAGGACCGTCGGCTGGC GGTGACGCTGTTCCTGCAGGGCCACAGCGTGCCGGAGTCCGCGCGGTTGTTGGGCTGGGACGACAAGCGCACCGAGAACC TCATCTACCGCGGCCTGGCCGCGCTGCGCCTGTGCCTCTCCACGAAGGGATTCGAGCCGTGA
Upstream 100 bases:
>100_bases CAGGCGATACCACCGGGCCTTGCCGTAGCGCCCGGCCCAGACGCACTCGCCGGAAATCGTACGGGTGAAGTGAGGGTAAA AAATCCCGCCCTCCGTTCGG
Downstream 100 bases:
>100_bases GCGAGCGAGGACGCGACGAGACGAAGCCCGATGATGCCACCGTCGAACGTCTGCGCGCCGCCGTGCGTGCCGAGGACCCG GTGGAGCGCGCGGAGGCGCC
Product: RNA polymerase sigma-70 factor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 233; Mature: 232
Protein sequence:
>233_residues MARRPRRPVPMPRSLGKSTPPGAGAPHVRHHTCRGRDLSMTMNAPRRNFHVEPRHRPAQAMVSLPSDVLERLREDLARAV ARVCPPRMADRRDDLVQTAMMRVMELQRREPDRSRLTPAYLYRVAYTALVDELRNVSRRREVQLEEVESLSEPPVASSDP EKAAGGSQIAQAVRDCLRKLVQDRRLAVTLFLQGHSVPESARLLGWDDKRTENLIYRGLAALRLCLSTKGFEP
Sequences:
>Translated_233_residues MARRPRRPVPMPRSLGKSTPPGAGAPHVRHHTCRGRDLSMTMNAPRRNFHVEPRHRPAQAMVSLPSDVLERLREDLARAV ARVCPPRMADRRDDLVQTAMMRVMELQRREPDRSRLTPAYLYRVAYTALVDELRNVSRRREVQLEEVESLSEPPVASSDP EKAAGGSQIAQAVRDCLRKLVQDRRLAVTLFLQGHSVPESARLLGWDDKRTENLIYRGLAALRLCLSTKGFEP >Mature_232_residues ARRPRRPVPMPRSLGKSTPPGAGAPHVRHHTCRGRDLSMTMNAPRRNFHVEPRHRPAQAMVSLPSDVLERLREDLARAVA RVCPPRMADRRDDLVQTAMMRVMELQRREPDRSRLTPAYLYRVAYTALVDELRNVSRRREVQLEEVESLSEPPVASSDPE KAAGGSQIAQAVRDCLRKLVQDRRLAVTLFLQGHSVPESARLLGWDDKRTENLIYRGLAALRLCLSTKGFEP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26465; Mature: 26334
Theoretical pI: Translated: 11.19; Mature: 11.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARRPRRPVPMPRSLGKSTPPGAGAPHVRHHTCRGRDLSMTMNAPRRNFHVEPRHRPAQA CCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCEEEECCCCCCCCCCCCCCHHHH MVSLPSDVLERLREDLARAVARVCPPRMADRRDDLVQTAMMRVMELQRREPDRSRLTPAY HHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHH LYRVAYTALVDELRNVSRRREVQLEEVESLSEPPVASSDPEKAAGGSQIAQAVRDCLRKL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHH VQDRRLAVTLFLQGHSVPESARLLGWDDKRTENLIYRGLAALRLCLSTKGFEP HHCCCEEEEEEEECCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure ARRPRRPVPMPRSLGKSTPPGAGAPHVRHHTCRGRDLSMTMNAPRRNFHVEPRHRPAQA CCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCEEEECCCCCCCCCCCCCCHHHH MVSLPSDVLERLREDLARAVARVCPPRMADRRDDLVQTAMMRVMELQRREPDRSRLTPAY HHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHH LYRVAYTALVDELRNVSRRREVQLEEVESLSEPPVASSDPEKAAGGSQIAQAVRDCLRKL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHH VQDRRLAVTLFLQGHSVPESARLLGWDDKRTENLIYRGLAALRLCLSTKGFEP HHCCCEEEEEEEECCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA