| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108757364
Identifier: 108757364
GI number: 108757364
Start: 1458293
End: 1458874
Strand: Direct
Name: 108757364
Synonym: MXAN_1246
Alternate gene names: NA
Gene position: 1458293-1458874 (Clockwise)
Preceding gene: 108763788
Following gene: 108758365
Centisome position: 15.96
GC content: 70.1
Gene sequence:
>582_bases ATGGAATCCGAAGTTTCTTCCGCCACGTCCCTCCAGGCCCTGCTCGAGCGCCACGTTCCCGAGGACGTGAAGGAGCGAGA GGACCTGGAGCGCATGCGCCACTTCGCCCGTTCCCTGGCGCGGCCCTTCTCCCGGGAGCAACTGGAGGCCCACTTCACGG GCAGCGCGGTGGTGGTGGACCCAGAGGGCGCGCGCGTCGTCCTGTTGCATCACCGCAAGCTCCAACGCTGGCTGCAGCCC GGAGGACACGCGGATGTCACGGACGCGGGCCACATGGAGGCCACGGCGCTGCGTGAAGCCCGTGAGGAGACGGGATGTCG CGTGTCCCTGCACCCGGCCGCGCCCCAGCCGCTGGACGTGGACATCCACACCATCCCCGCGCGCCGCGACGAGCCGGAGC ACCACCACCTGGACGTGCGCTTCCTCGTGGTGGCGGAGAACCCCGACGCCCTGGTGCATGACCCGGCGGAGTCCTTCGGC GTGCGGTGGCTCACCTGGGATGAAGCCATGACGCATGCGGACGAAGTGCCTCTGCGTCGCATGCTGGCGAAAGCCCGGCG CGTGGTGGCCTCCGCGCCCTGA
Upstream 100 bases:
>100_bases CACATCCGGACCGGCTCACTCCACCGGCTCAGGAGGTTGTCACATGTCACGGGCGTGAGAAGGTGCTGGCGCCGCCTGGC CGGGGGCAGTACGGGGAGGC
Downstream 100 bases:
>100_bases AGCGCTCGAAAGCGGAAGCGCGCACGGCCTCGCGGTCAGGGGCACTGTGGCTTCGCGGACCGAGCGCGCGCGCCCGCACC CGGATTTGAAACAAAATATG
Product: NUDIX family hydrolase
Products: NA
Alternate protein names: Nudix Hydrolase; Nudix Family Hydrolase; Nudix Hydrolase Family Protein; NUDIX Family Hydrolase; Hydrolase Nudix
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MESEVSSATSLQALLERHVPEDVKEREDLERMRHFARSLARPFSREQLEAHFTGSAVVVDPEGARVVLLHHRKLQRWLQP GGHADVTDAGHMEATALREAREETGCRVSLHPAAPQPLDVDIHTIPARRDEPEHHHLDVRFLVVAENPDALVHDPAESFG VRWLTWDEAMTHADEVPLRRMLAKARRVVASAP
Sequences:
>Translated_193_residues MESEVSSATSLQALLERHVPEDVKEREDLERMRHFARSLARPFSREQLEAHFTGSAVVVDPEGARVVLLHHRKLQRWLQP GGHADVTDAGHMEATALREAREETGCRVSLHPAAPQPLDVDIHTIPARRDEPEHHHLDVRFLVVAENPDALVHDPAESFG VRWLTWDEAMTHADEVPLRRMLAKARRVVASAP >Mature_193_residues MESEVSSATSLQALLERHVPEDVKEREDLERMRHFARSLARPFSREQLEAHFTGSAVVVDPEGARVVLLHHRKLQRWLQP GGHADVTDAGHMEATALREAREETGCRVSLHPAAPQPLDVDIHTIPARRDEPEHHHLDVRFLVVAENPDALVHDPAESFG VRWLTWDEAMTHADEVPLRRMLAKARRVVASAP
Specific function: Unknown
COG id: COG0494
COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21797; Mature: 21797
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESEVSSATSLQALLERHVPEDVKEREDLERMRHFARSLARPFSREQLEAHFTGSAVVVD CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHEECCCEEEEC PEGARVVLLHHRKLQRWLQPGGHADVTDAGHMEATALREAREETGCRVSLHPAAPQPLDV CCCCEEEEEEHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCC DIHTIPARRDEPEHHHLDVRFLVVAENPDALVHDPAESFGVRWLTWDEAMTHADEVPLRR EEEECCCCCCCCCCCEEEEEEEEEECCCCCEEECCHHHHCCEEEEHHHHHHHHHHHHHHH MLAKARRVVASAP HHHHHHHHHHCCC >Mature Secondary Structure MESEVSSATSLQALLERHVPEDVKEREDLERMRHFARSLARPFSREQLEAHFTGSAVVVD CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHEECCCEEEEC PEGARVVLLHHRKLQRWLQPGGHADVTDAGHMEATALREAREETGCRVSLHPAAPQPLDV CCCCEEEEEEHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCC DIHTIPARRDEPEHHHLDVRFLVVAENPDALVHDPAESFGVRWLTWDEAMTHADEVPLRR EEEECCCCCCCCCCCEEEEEEEEEECCCCCEEECCHHHHCCEEEEHHHHHHHHHHHHHHH MLAKARRVVASAP HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA