| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
Click here to switch to the map view.
The map label for this gene is agmN
Identifier: 108757321
GI number: 108757321
Start: 1977924
End: 1979465
Strand: Reverse
Name: agmN
Synonym: MXAN_1673
Alternate gene names: NA
Gene position: 1979465-1977924 (Counterclockwise)
Preceding gene: 108760418
Following gene: 108757613
Centisome position: 21.66
GC content: 66.41
Gene sequence:
>1542_bases ATGAAGCCCACGCCAGGAGACATCTTCGTCGTCCACACCCCTCGGCTTGACGCCTACACGGCGGTCCAGGTGACCGCCCT GAAGGTCGAGGGGAAACACGAGCTGGCCTGTGTGCTGGCGTTGGATTGGGTAGGCCCCTCCCTGCCCGACGCCGCCGCGG TGGCGGCCATGGCTCCCGCCCACTTCAACTTCTTCTTCTGGAAGGACCACTGCGTCCACGTCTGGGCGTCCGCCGAGGTT CCTCGCGGCTTCACCCGGGTGGGCCACCGGCCGCCCCTCGTCGTCGAGGACGTCAACAGCTACAGCGGTTGGCCATCCGG CAGCGCCCTCTACAGTCAGCGCCGCTGGGAGGCCATCCCCCAGGCGCAGCGCGACGCCTTCAAGCAGATGGTCGCAGCAC CCGACGAGCAGGTGCTGTTCACGGTCGGCGACATGGAGGTACGCCGCTCGACGCAGCGGCTGGATACGGCTCGCCTCGCC GCCGCGCCTGACTTGACGGTGTTCGAGGTGCTGCCGATTCTGACGTCTGTCAATGCGGACGCCCCCATCCCTGGCCTGTT CGACTTCATCCGGCGCCGCCCCTTTGTCTATGAATCAGCGGTGCTCAAGCATGGTGAGCGCCGAGTCGACCTGCGGGGAG CCCAACTGTCCCGGCTCACGCTCGACGTGACGGGCGTCCACGAGCTCTATCTGAACGACGGCCTTGAGGACCTGTCCCTG GTCGGCCAGCCGGACCCGGCGCTGAAGATTCACGGCGAGGCGGATGGGCGCTGGCTGACCTTGTCCCTGGGCGCTCCGGA CATGCCCTGGTCCGGTCTGGACACACTGGACAGCCTTCATCTGCGGGCCGCGCGCGACGTGGATGCGTCGCGCATCGTGC GGCGCTTTCCGAACCTGACGGAGCTGCGCATCTGGGGAGCCCCGGGCTACCTGAGAAACACCGAGGAGCTGGCGAAGCTC CCGGCCCTGGCCATGCTGACATTGAGCGACCTGTTCGGGATGTCACCCGACGAGTTTCCCGGTCCGGAGCAGCTCCCCCA CCTGGGCATGCTGTGGTTGACGAGCATTCCCGCGGACGTCGCCGCCCAGGTGAAGAAAGCCTACAAGGCCGCTGCGCGCG AGGGATTGGACCTGTCGGTGCGACAGCCGCGCAAGGCCGACTGGCTGGCGGAGAACCTGGACAACCCCTTTCGCGTCTGG GACGGAGCCGACAACATCAGTCCAGCCCAGGCGAAGAAGGCCGCGGCGCTGTACCGCCAGGCACGGTCGGCCGCGCTCAA GGCCGTATCCGAAGGAGACCGCTCCCCCGCCGCCTTCGTGTCCGCGCTCACCCCCATCGTCACGGCCTACACCGATGGCT TCAACAAGCTGGATGCCCGCCACACCTTCATCTTCACCGAGGAGCGTGAGCAGATTTATCTCGCGCTGATGGGCATCTTC GACGCAGTGGATGAAAAGCTCCGGTCCACGGAAGGAACTCCCGCCGAGCCGCTCAATCGAGATGCCCTGGTGTCGGTGAT GGATTCGATTCGAGACTTCTAG
Upstream 100 bases:
>100_bases AGCGCTCCGTCGCCGCCCCTCCCCCTCAAACAACGAGGGAGCGATGCGGCACATGGCCTAGACTGGGTCCGAACCAACCC TCTTACGGACCCGGTCGACC
Downstream 100 bases:
>100_bases GGTGATTCACCCGCGCAAGCACGCTGGTGACTCCCTTCGGCGAATTCACGGAGCCCTGCATACATCAGCGACTCCGTTGG CCAGCCGATTGCCTGGGGCC
Product: adventurous gliding motility protein AgmN
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 513; Mature: 513
Protein sequence:
>513_residues MKPTPGDIFVVHTPRLDAYTAVQVTALKVEGKHELACVLALDWVGPSLPDAAAVAAMAPAHFNFFFWKDHCVHVWASAEV PRGFTRVGHRPPLVVEDVNSYSGWPSGSALYSQRRWEAIPQAQRDAFKQMVAAPDEQVLFTVGDMEVRRSTQRLDTARLA AAPDLTVFEVLPILTSVNADAPIPGLFDFIRRRPFVYESAVLKHGERRVDLRGAQLSRLTLDVTGVHELYLNDGLEDLSL VGQPDPALKIHGEADGRWLTLSLGAPDMPWSGLDTLDSLHLRAARDVDASRIVRRFPNLTELRIWGAPGYLRNTEELAKL PALAMLTLSDLFGMSPDEFPGPEQLPHLGMLWLTSIPADVAAQVKKAYKAAAREGLDLSVRQPRKADWLAENLDNPFRVW DGADNISPAQAKKAAALYRQARSAALKAVSEGDRSPAAFVSALTPIVTAYTDGFNKLDARHTFIFTEEREQIYLALMGIF DAVDEKLRSTEGTPAEPLNRDALVSVMDSIRDF
Sequences:
>Translated_513_residues MKPTPGDIFVVHTPRLDAYTAVQVTALKVEGKHELACVLALDWVGPSLPDAAAVAAMAPAHFNFFFWKDHCVHVWASAEV PRGFTRVGHRPPLVVEDVNSYSGWPSGSALYSQRRWEAIPQAQRDAFKQMVAAPDEQVLFTVGDMEVRRSTQRLDTARLA AAPDLTVFEVLPILTSVNADAPIPGLFDFIRRRPFVYESAVLKHGERRVDLRGAQLSRLTLDVTGVHELYLNDGLEDLSL VGQPDPALKIHGEADGRWLTLSLGAPDMPWSGLDTLDSLHLRAARDVDASRIVRRFPNLTELRIWGAPGYLRNTEELAKL PALAMLTLSDLFGMSPDEFPGPEQLPHLGMLWLTSIPADVAAQVKKAYKAAAREGLDLSVRQPRKADWLAENLDNPFRVW DGADNISPAQAKKAAALYRQARSAALKAVSEGDRSPAAFVSALTPIVTAYTDGFNKLDARHTFIFTEEREQIYLALMGIF DAVDEKLRSTEGTPAEPLNRDALVSVMDSIRDF >Mature_513_residues MKPTPGDIFVVHTPRLDAYTAVQVTALKVEGKHELACVLALDWVGPSLPDAAAVAAMAPAHFNFFFWKDHCVHVWASAEV PRGFTRVGHRPPLVVEDVNSYSGWPSGSALYSQRRWEAIPQAQRDAFKQMVAAPDEQVLFTVGDMEVRRSTQRLDTARLA AAPDLTVFEVLPILTSVNADAPIPGLFDFIRRRPFVYESAVLKHGERRVDLRGAQLSRLTLDVTGVHELYLNDGLEDLSL VGQPDPALKIHGEADGRWLTLSLGAPDMPWSGLDTLDSLHLRAARDVDASRIVRRFPNLTELRIWGAPGYLRNTEELAKL PALAMLTLSDLFGMSPDEFPGPEQLPHLGMLWLTSIPADVAAQVKKAYKAAAREGLDLSVRQPRKADWLAENLDNPFRVW DGADNISPAQAKKAAALYRQARSAALKAVSEGDRSPAAFVSALTPIVTAYTDGFNKLDARHTFIFTEEREQIYLALMGIF DAVDEKLRSTEGTPAEPLNRDALVSVMDSIRDF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56628; Mature: 56628
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPTPGDIFVVHTPRLDAYTAVQVTALKVEGKHELACVLALDWVGPSLPDAAAVAAMAPA CCCCCCCEEEEECCCCCCEEEEEEEEEEECCCCCEEEEEEEECCCCCCCCHHHHHHHCCC HFNFFFWKDHCVHVWASAEVPRGFTRVGHRPPLVVEDVNSYSGWPSGSALYSQRRWEAIP CCEEEEEECCEEEEEECCCCCCHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCC QAQRDAFKQMVAAPDEQVLFTVGDMEVRRSTQRLDTARLAAAPDLTVFEVLPILTSVNAD HHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCC APIPGLFDFIRRRPFVYESAVLKHGERRVDLRGAQLSRLTLDVTGVHELYLNDGLEDLSL CCCCHHHHHHHCCCCHHHHHHHHCCCCEEEECCCEEEEEEEEECCHHHHHHCCCHHHHHH VGQPDPALKIHGEADGRWLTLSLGAPDMPWSGLDTLDSLHLRAARDVDASRIVRRFPNLT CCCCCCCEEEECCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCE ELRIWGAPGYLRNTEELAKLPALAMLTLSDLFGMSPDEFPGPEQLPHLGMLWLTSIPADV EEEEECCCCCCCCHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHCCCCCHHHHHHCCHHH AAQVKKAYKAAAREGLDLSVRQPRKADWLAENLDNPFRVWDGADNISPAQAKKAAALYRQ HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHH ARSAALKAVSEGDRSPAAFVSALTPIVTAYTDGFNKLDARHTFIFTEEREQIYLALMGIF HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHCCCCEEEEEECCHHHHHHHHHHHH DAVDEKLRSTEGTPAEPLNRDALVSVMDSIRDF HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MKPTPGDIFVVHTPRLDAYTAVQVTALKVEGKHELACVLALDWVGPSLPDAAAVAAMAPA CCCCCCCEEEEECCCCCCEEEEEEEEEEECCCCCEEEEEEEECCCCCCCCHHHHHHHCCC HFNFFFWKDHCVHVWASAEVPRGFTRVGHRPPLVVEDVNSYSGWPSGSALYSQRRWEAIP CCEEEEEECCEEEEEECCCCCCHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCC QAQRDAFKQMVAAPDEQVLFTVGDMEVRRSTQRLDTARLAAAPDLTVFEVLPILTSVNAD HHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCC APIPGLFDFIRRRPFVYESAVLKHGERRVDLRGAQLSRLTLDVTGVHELYLNDGLEDLSL CCCCHHHHHHHCCCCHHHHHHHHCCCCEEEECCCEEEEEEEEECCHHHHHHCCCHHHHHH VGQPDPALKIHGEADGRWLTLSLGAPDMPWSGLDTLDSLHLRAARDVDASRIVRRFPNLT CCCCCCCEEEECCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCE ELRIWGAPGYLRNTEELAKLPALAMLTLSDLFGMSPDEFPGPEQLPHLGMLWLTSIPADV EEEEECCCCCCCCHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHCCCCCHHHHHHCCHHH AAQVKKAYKAAAREGLDLSVRQPRKADWLAENLDNPFRVWDGADNISPAQAKKAAALYRQ HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHH ARSAALKAVSEGDRSPAAFVSALTPIVTAYTDGFNKLDARHTFIFTEEREQIYLALMGIF HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHCCCCEEEEEECCHHHHHHHHHHHH DAVDEKLRSTEGTPAEPLNRDALVSVMDSIRDF HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA