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The map label for this gene is ynfJ [C]

Identifier: 108757317

GI number: 108757317

Start: 153663

End: 154964

Strand: Reverse

Name: ynfJ [C]

Synonym: MXAN_0131

Alternate gene names: 108757317

Gene position: 154964-153663 (Counterclockwise)

Preceding gene: 108760936

Following gene: 108760366

Centisome position: 1.7

GC content: 70.89

Gene sequence:

>1302_bases
GTGAATCTTTCCCGTGGCACGAGAGCGCTGATGCAGTGGCTGCTCCTGGGTGGGCTGGTGGGCGTCGTCTGCGGCGTGGC
ATCCGCGGTCTTCTTGTACCTGTTGGACGAAGCGACGCACTTCCGGGAGGGGCACCCGTGGCTGGTGTACGCGCTGCCGG
TGGCGGGGCTGGTGCTGGGGGCGGTGTACGGGAAGTGGGGTAGGCCCATTCGCGGGGGCAACAACCTGGTGCTGGACACG
GTGCACGCGAGCGACGCGCAGGTGCCGGTGCGCATGGCGCCCATGGTGCTGGTGGGGACCGTGCTGACGCACCTGTTCGG
CGGCAGTGCGGGCCGCGAGGGCACAGCGGTGCAGATGGGCGGCAGTCTGGCGGACCTGGTGGCGCGACGCTTCCGGGTGG
GCCCGGACACACGCCGCGAGCTGCTGGCCGCGGGCATCGCGGGTGGGTTCGGTTCGGTGTTCGGCACGCCGGTGGCGGGG
GCGGTGTTCGGGCTGGAGGTCGTGGTGGTGGGGCGCATGGGCTACGAGGCCCTGCTGCCCGCGCTGGTGGCATCCGTGGT
GGGAGACATGGTGACGCGGGGGCTGGGCATCCACCACACGCCGTATCCGGCGCCGGGGGCGCTGCCGCTGACAGTGGCGG
TGCTGGCGAAGTGGCTGGTGTTCGCGGTGGCGGTGGCCGTGGTGGCGGTGGTGTTCGTGGAGTTGATGCACCGGCTGAAG
AAGCTGCTGGAGCAGCGCGTGCAGGTGTTGCCGCTGCGGATGGCGTTGGGCGGTCTGGCCGTGCTGCTGCTGTGGCTGCT
GGCCGGTACGGATGACTACCTGGGCCTGGGGGTACCGGGCATCCAGCGAGCCTTCGAGGACCCGGCGCTGCCCGTGTCGG
CGTTCGCGTGGAAGCTTGCCTTCACGGTGGTGACGCTGGCCGCGGGATTCCTGGGCGGCGAGGTGACGCCGCTGTTCTTC
ATCGGCGCATCGCTGGGCAACGTCCTGGCGCGGCTGTTGGGCCTGCCGTTGGATTTGGGCGCGGCGGTGGGCATGGCGGC
CCTGTTCGCGGCGGCGGCGAATACGCCGCTGGCGCTGTCCATCATGGCCGTGGAGCTGTTGGGGGCGAATGTGTTGCCCC
ACGTGGCGATTGTGGCCACGGTGGCGTACCTGCTCACGGGGCAACGGGGCATCTATCCATCACAGCGGATTGCCCGGATG
AAACACGGAGGGCCGCTGCTGGAGAAACTCGTGGCCCTGCGGGAGCTGGCCCGCGAGGACCGCGCCCCGCCCTCAGGGCC
TGAGGGACGGGGCGGCGGCTGA

Upstream 100 bases:

>100_bases
ATGACCTCACCCGTGTTTGGACCGATGTCGTAAGAATGACGCGGAGCAAACCTTTGACGCGGTGTTTCATCATGTTTCAC
CCAGGTCCGGAGTGTTTCAC

Downstream 100 bases:

>100_bases
GGGTTACGGCTCCGGGAAGTGGTAGACGTTTCCATCGTCGCCGACGATCCAGAAGTTGCTTGAGGAGGTCATGGCGATGT
CGCGGAGCGGCACGTTCGGT

Product: chloride channel (ClC) family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 433; Mature: 433

Protein sequence:

>433_residues
MNLSRGTRALMQWLLLGGLVGVVCGVASAVFLYLLDEATHFREGHPWLVYALPVAGLVLGAVYGKWGRPIRGGNNLVLDT
VHASDAQVPVRMAPMVLVGTVLTHLFGGSAGREGTAVQMGGSLADLVARRFRVGPDTRRELLAAGIAGGFGSVFGTPVAG
AVFGLEVVVVGRMGYEALLPALVASVVGDMVTRGLGIHHTPYPAPGALPLTVAVLAKWLVFAVAVAVVAVVFVELMHRLK
KLLEQRVQVLPLRMALGGLAVLLLWLLAGTDDYLGLGVPGIQRAFEDPALPVSAFAWKLAFTVVTLAAGFLGGEVTPLFF
IGASLGNVLARLLGLPLDLGAAVGMAALFAAAANTPLALSIMAVELLGANVLPHVAIVATVAYLLTGQRGIYPSQRIARM
KHGGPLLEKLVALRELAREDRAPPSGPEGRGGG

Sequences:

>Translated_433_residues
MNLSRGTRALMQWLLLGGLVGVVCGVASAVFLYLLDEATHFREGHPWLVYALPVAGLVLGAVYGKWGRPIRGGNNLVLDT
VHASDAQVPVRMAPMVLVGTVLTHLFGGSAGREGTAVQMGGSLADLVARRFRVGPDTRRELLAAGIAGGFGSVFGTPVAG
AVFGLEVVVVGRMGYEALLPALVASVVGDMVTRGLGIHHTPYPAPGALPLTVAVLAKWLVFAVAVAVVAVVFVELMHRLK
KLLEQRVQVLPLRMALGGLAVLLLWLLAGTDDYLGLGVPGIQRAFEDPALPVSAFAWKLAFTVVTLAAGFLGGEVTPLFF
IGASLGNVLARLLGLPLDLGAAVGMAALFAAAANTPLALSIMAVELLGANVLPHVAIVATVAYLLTGQRGIYPSQRIARM
KHGGPLLEKLVALRELAREDRAPPSGPEGRGGG
>Mature_433_residues
MNLSRGTRALMQWLLLGGLVGVVCGVASAVFLYLLDEATHFREGHPWLVYALPVAGLVLGAVYGKWGRPIRGGNNLVLDT
VHASDAQVPVRMAPMVLVGTVLTHLFGGSAGREGTAVQMGGSLADLVARRFRVGPDTRRELLAAGIAGGFGSVFGTPVAG
AVFGLEVVVVGRMGYEALLPALVASVVGDMVTRGLGIHHTPYPAPGALPLTVAVLAKWLVFAVAVAVVAVVFVELMHRLK
KLLEQRVQVLPLRMALGGLAVLLLWLLAGTDDYLGLGVPGIQRAFEDPALPVSAFAWKLAFTVVTLAAGFLGGEVTPLFF
IGASLGNVLARLLGLPLDLGAAVGMAALFAAAANTPLALSIMAVELLGANVLPHVAIVATVAYLLTGQRGIYPSQRIARM
KHGGPLLEKLVALRELAREDRAPPSGPEGRGGG

Specific function: Unknown

COG id: COG0038

COG function: function code P; Chloride channel protein EriC

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the chloride channel (TC 2.A.49) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014743
- InterPro:   IPR001807 [H]

Pfam domain/function: PF00654 Voltage_CLC [H]

EC number: NA

Molecular weight: Translated: 44992; Mature: 44992

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCCCCCCC
>Mature Secondary Structure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CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]