| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is muT4 [H]
Identifier: 108757311
GI number: 108757311
Start: 6123336
End: 6123815
Strand: Reverse
Name: muT4 [H]
Synonym: MXAN_4891
Alternate gene names: 108757311
Gene position: 6123815-6123336 (Counterclockwise)
Preceding gene: 108757020
Following gene: 108757643
Centisome position: 67.0
GC content: 69.38
Gene sequence:
>480_bases ATGCCACGCGAGGCGTCCGCAGGAGGTGTCGTCATCCGGGAGAGCGCCGGCCACTGGGAGGTGGTCGTCATCCGTCCCCA TGGCCGCACCTTGTGGGCGCTCCCCAAGGGGCACGTGGACCCAGGTGAGTCGCCGGAGCAGACGGCCAGCCGCGAGGTGC GTGAGGAGACGGGGCTGTCCGTGTCGCTCATGGCCCCGCTGGGCGAGATTCGCTACGTGTACCAGTTCCGCGGACAGCGC ATCTTCAAGCGCGTCCACTTCTTCCTGTTCCGCTATCAGGAGGGGGAGCTGGGGCCGCTGCCGGGACCGCGCATCGAGGT GGACGAGGTGCGCTGGGTGCCGGTGGTCCAACTGGTGCCACTGCTGGGCTACAAAGGAGAGAAGGCCGTTGCCTCGCGGG CGGTGCGCTGGTTGCGCTCCCAGGGCCTGCTCCCCGAAGCCCCCTCCCCGGTGAGCATTGCCGGGAAGGAAGGGGGCTGA
Upstream 100 bases:
>100_bases TGCGTTACGCCTACCGGCTGGGGGCGGAGGCCAAGCTTCGCCATTTCGCGCATGGCGGGTGAGCACCTTTCTCCTTCCGT ATCGGGTAGGGTGGGCGGGT
Downstream 100 bases:
>100_bases AGGGAACCGCGGGGACTACTTGGGCTCGTCGCCCGTGTACTTGCCGGACAGCGCCTCGCGCACGTCACGGTCGAACTTCA CGCGGCCGGTGGCCACCTCG
Product: NUDIX family hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MPREASAGGVVIRESAGHWEVVVIRPHGRTLWALPKGHVDPGESPEQTASREVREETGLSVSLMAPLGEIRYVYQFRGQR IFKRVHFFLFRYQEGELGPLPGPRIEVDEVRWVPVVQLVPLLGYKGEKAVASRAVRWLRSQGLLPEAPSPVSIAGKEGG
Sequences:
>Translated_159_residues MPREASAGGVVIRESAGHWEVVVIRPHGRTLWALPKGHVDPGESPEQTASREVREETGLSVSLMAPLGEIRYVYQFRGQR IFKRVHFFLFRYQEGELGPLPGPRIEVDEVRWVPVVQLVPLLGYKGEKAVASRAVRWLRSQGLLPEAPSPVSIAGKEGG >Mature_158_residues PREASAGGVVIRESAGHWEVVVIRPHGRTLWALPKGHVDPGESPEQTASREVREETGLSVSLMAPLGEIRYVYQFRGQRI FKRVHFFLFRYQEGELGPLPGPRIEVDEVRWVPVVQLVPLLGYKGEKAVASRAVRWLRSQGLLPEAPSPVSIAGKEGG
Specific function: May be involved in the GO system responsible for removing an oxidatively damaged form of guanine (7,8-dihydro-8- oxoguanine, 8-oxo-dGTP) from DNA and the nucleotide pool. In vitro has dATPase rather than 8-oxo-dGTPase activity [H]
COG id: COG0494
COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 nudix hydrolase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020476 - InterPro: IPR020084 - InterPro: IPR000086 - InterPro: IPR015797 [H]
Pfam domain/function: PF00293 NUDIX [H]
EC number: 3.6.1.- [C]
Molecular weight: Translated: 17657; Mature: 17525
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPREASAGGVVIRESAGHWEVVVIRPHGRTLWALPKGHVDPGESPEQTASREVREETGLS CCCCCCCCCEEEEECCCCEEEEEECCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCE VSLMAPLGEIRYVYQFRGQRIFKRVHFFLFRYQEGELGPLPGPRIEVDEVRWVPVVQLVP EEEECCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCEEECCCCEEHHHHHHH LLGYKGEKAVASRAVRWLRSQGLLPEAPSPVSIAGKEGG HHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCC >Mature Secondary Structure PREASAGGVVIRESAGHWEVVVIRPHGRTLWALPKGHVDPGESPEQTASREVREETGLS CCCCCCCCEEEEECCCCEEEEEECCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCE VSLMAPLGEIRYVYQFRGQRIFKRVHFFLFRYQEGELGPLPGPRIEVDEVRWVPVVQLVP EEEECCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCEEECCCCEEHHHHHHH LLGYKGEKAVASRAVRWLRSQGLLPEAPSPVSIAGKEGG HHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]