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The map label for this gene is radA [H]

Identifier: 108757285

GI number: 108757285

Start: 1467243

End: 1468610

Strand: Reverse

Name: radA [H]

Synonym: MXAN_1256

Alternate gene names: 108757285

Gene position: 1468610-1467243 (Counterclockwise)

Preceding gene: 108758583

Following gene: 108758174

Centisome position: 16.07

GC content: 68.71

Gene sequence:

>1368_bases
ATGGCGAAGGCGAAGACGCACTACACCTGTCAGGCGTGTGGATACAAAACGGCGAAGTGGCTCGGAAAGTGTCCGGACTG
TGGCGCGTGGAGTTCCCTGCTGGAGGAGACGGACCCGAAGGCGGATGAACGACGTCCGGCCTGGGGTGCCTCGGGCGGTT
CGGCGCGGCCCATGCTGCTCAAGGAAGTGAGCGGCGAGACGGAGACGCGCCGGCGCACGGGCATCGCCGAATTCGACCGC
GTGCTGGGCGGCGGCGTGGTGAGTGGCTCCATCGTGCTGCTGGGTGGCGACCCGGGCATCGGCAAGTCCACACTGCTGCT
GGCGGCGTTGGACAGGTTGGCGCGCCACGGACCGGTGCTCTACGTCTCCGGTGAAGAGAGCCTGCGACAGACGAAGATGC
GCGCCGAGCGGCTCCGGGTGGAGGGAGAGGCCATCCACCTGTTCGCAGAGACGGACGCGGAGCGGGTGCTGACGGCGACG
GAGGCGTTGAAGCCCCAGGCGCTGGTGGTGGACTCCATCCAGACCATGTACCTGCCGGAGCTGGGCAACGCGCCCGGCAG
CATCACCCAGGTGCGCGAGGTGGCGGGCCGGCTGATGGCCTACGCGAAGCGCACGGGGGTGCCCACGTTCCTGGTAGGCC
ACGTGACGAAGGAAGGTTCCATCGCGGGCCCGCGCGTGTTGGAGCACATGGTGGACACGGTCCTCTACTTCGAGGGTGAG
CGGGGCCACCCGTTCCGAATCCTGCGCGCGCACAAGAACCGCTTCGGCTCCACGAACGAGATTGGCGTCTTCGAGATGAA
GGGCGCGGGGCTGGTGGAGGTGTCCGACCCCTCCGCCCTCTTCCTGTCGGAGCGGCCGGTGGGCAAGTCTGGCAGCGTGG
TGACGAGCACGCTGAACGGTACGCGCCCACTGCTGGTGGAGGTGCAAGCGCTGGTGGCGCCCACGGGCTACGGCACCGCG
CGGCGCACGGCGATTGGCGTGGACGGCAACCGCGTGGCGCTGCTGGCGGCGGTGCTGGAGAAGAAGGAAGAGATTCCGCT
GGTGGGCTGTGACTTGTTCGTCAACGTGGCGGGCGGCATGCAGCTCACCGAGCCCGCGTGTGACCTCGCGGTGTGCGCGG
CGCTGGTGAGCAGCCTCCAGAATCGTCCGTTGGATCCGAAGACGCTGGTGCTCGGAGAAGTGGGCCTCGCGGGAGAGGTG
CGAGCGGTGGGTCAGGTGGAGCCCCGACTGGCGGAGGCCGCGAAGATGGGCTTCCAGCGCGTGGTGATGCCCGCGGGCAG
CGCGCGGCGCCTGGAGGATGCAGGCCCGAAGATGAAGATCGTCGGCGTGGAGACGCTCGGCGACGCGCTCGTCGCGATGT
TCGACTGA

Upstream 100 bases:

>100_bases
ACTTGGCGCGGGGGGCTTGACATGGTGCCTGCCCGCTCTGCGGTCGTGCCTGCCCGTAAGGTCGCAAAAACGTCAGGGTT
CCGCGCTATTCACCCAACCC

Downstream 100 bases:

>100_bases
GCCGACGCGGGCACAGCGTTGGCGGCAACGGATAACCTGGGAGCGGGCACCGCTAAATGACGGGGTGCCCATCCCGGGGG
ACCTCCATGCTGCTTCGATG

Product: DNA repair protein RadA

Products: NA

Alternate protein names: DNA repair protein sms homolog [H]

Number of amino acids: Translated: 455; Mature: 454

Protein sequence:

>455_residues
MAKAKTHYTCQACGYKTAKWLGKCPDCGAWSSLLEETDPKADERRPAWGASGGSARPMLLKEVSGETETRRRTGIAEFDR
VLGGGVVSGSIVLLGGDPGIGKSTLLLAALDRLARHGPVLYVSGEESLRQTKMRAERLRVEGEAIHLFAETDAERVLTAT
EALKPQALVVDSIQTMYLPELGNAPGSITQVREVAGRLMAYAKRTGVPTFLVGHVTKEGSIAGPRVLEHMVDTVLYFEGE
RGHPFRILRAHKNRFGSTNEIGVFEMKGAGLVEVSDPSALFLSERPVGKSGSVVTSTLNGTRPLLVEVQALVAPTGYGTA
RRTAIGVDGNRVALLAAVLEKKEEIPLVGCDLFVNVAGGMQLTEPACDLAVCAALVSSLQNRPLDPKTLVLGEVGLAGEV
RAVGQVEPRLAEAAKMGFQRVVMPAGSARRLEDAGPKMKIVGVETLGDALVAMFD

Sequences:

>Translated_455_residues
MAKAKTHYTCQACGYKTAKWLGKCPDCGAWSSLLEETDPKADERRPAWGASGGSARPMLLKEVSGETETRRRTGIAEFDR
VLGGGVVSGSIVLLGGDPGIGKSTLLLAALDRLARHGPVLYVSGEESLRQTKMRAERLRVEGEAIHLFAETDAERVLTAT
EALKPQALVVDSIQTMYLPELGNAPGSITQVREVAGRLMAYAKRTGVPTFLVGHVTKEGSIAGPRVLEHMVDTVLYFEGE
RGHPFRILRAHKNRFGSTNEIGVFEMKGAGLVEVSDPSALFLSERPVGKSGSVVTSTLNGTRPLLVEVQALVAPTGYGTA
RRTAIGVDGNRVALLAAVLEKKEEIPLVGCDLFVNVAGGMQLTEPACDLAVCAALVSSLQNRPLDPKTLVLGEVGLAGEV
RAVGQVEPRLAEAAKMGFQRVVMPAGSARRLEDAGPKMKIVGVETLGDALVAMFD
>Mature_454_residues
AKAKTHYTCQACGYKTAKWLGKCPDCGAWSSLLEETDPKADERRPAWGASGGSARPMLLKEVSGETETRRRTGIAEFDRV
LGGGVVSGSIVLLGGDPGIGKSTLLLAALDRLARHGPVLYVSGEESLRQTKMRAERLRVEGEAIHLFAETDAERVLTATE
ALKPQALVVDSIQTMYLPELGNAPGSITQVREVAGRLMAYAKRTGVPTFLVGHVTKEGSIAGPRVLEHMVDTVLYFEGER
GHPFRILRAHKNRFGSTNEIGVFEMKGAGLVEVSDPSALFLSERPVGKSGSVVTSTLNGTRPLLVEVQALVAPTGYGTAR
RTAIGVDGNRVALLAAVLEKKEEIPLVGCDLFVNVAGGMQLTEPACDLAVCAALVSSLQNRPLDPKTLVLGEVGLAGEVR
AVGQVEPRLAEAAKMGFQRVVMPAGSARRLEDAGPKMKIVGVETLGDALVAMFD

Specific function: May play a role in the repair of endogenous alkylation damage [H]

COG id: COG1066

COG function: function code O; Predicted ATP-dependent serine protease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recA family. RadA subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790850, Length=461, Percent_Identity=46.8546637744035, Blast_Score=402, Evalue=1e-113,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR014774
- InterPro:   IPR004504
- InterPro:   IPR008269
- InterPro:   IPR020568 [H]

Pfam domain/function: PF06745 KaiC; PF05362 Lon_C [H]

EC number: NA

Molecular weight: Translated: 48345; Mature: 48214

Theoretical pI: Translated: 7.79; Mature: 7.79

Prosite motif: PS50162 RECA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKAKTHYTCQACGYKTAKWLGKCPDCGAWSSLLEETDPKADERRPAWGASGGSARPMLL
CCCCCCCEEEHHCCCHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHH
KEVSGETETRRRTGIAEFDRVLGGGVVSGSIVLLGGDPGIGKSTLLLAALDRLARHGPVL
HHHCCCHHHHHHCCHHHHHHHHCCCEEECEEEEEECCCCCCHHHHHHHHHHHHHHCCCEE
YVSGEESLRQTKMRAERLRVEGEAIHLFAETDAERVLTATEALKPQALVVDSIQTMYLPE
EECCHHHHHHHHHHHHHHEECCCEEEEEECCCHHHHHHHHHHCCCCEEEHHHHHHHCCCC
LGNAPGSITQVREVAGRLMAYAKRTGVPTFLVGHVTKEGSIAGPRVLEHMVDTVLYFEGE
CCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHEEEECC
RGHPFRILRAHKNRFGSTNEIGVFEMKGAGLVEVSDPSALFLSERPVGKSGSVVTSTLNG
CCCCCCEEEHHHHCCCCCCCCEEEEECCCCEEEECCCCEEEEECCCCCCCCCEEEEECCC
TRPLLVEVQALVAPTGYGTARRTAIGVDGNRVALLAAVLEKKEEIPLVGCDLFVNVAGGM
CCCCEEEEEHHHCCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCCEEECEEEEEECCCC
QLTEPACDLAVCAALVSSLQNRPLDPKTLVLGEVGLAGEVRAVGQVEPRLAEAAKMGFQR
EECCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCE
VVMPAGSARRLEDAGPKMKIVGVETLGDALVAMFD
EEECCCCCCHHHHCCCCEEEEEEHHHCCHHHHCCC
>Mature Secondary Structure 
AKAKTHYTCQACGYKTAKWLGKCPDCGAWSSLLEETDPKADERRPAWGASGGSARPMLL
CCCCCCEEEHHCCCHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHH
KEVSGETETRRRTGIAEFDRVLGGGVVSGSIVLLGGDPGIGKSTLLLAALDRLARHGPVL
HHHCCCHHHHHHCCHHHHHHHHCCCEEECEEEEEECCCCCCHHHHHHHHHHHHHHCCCEE
YVSGEESLRQTKMRAERLRVEGEAIHLFAETDAERVLTATEALKPQALVVDSIQTMYLPE
EECCHHHHHHHHHHHHHHEECCCEEEEEECCCHHHHHHHHHHCCCCEEEHHHHHHHCCCC
LGNAPGSITQVREVAGRLMAYAKRTGVPTFLVGHVTKEGSIAGPRVLEHMVDTVLYFEGE
CCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHEEEECC
RGHPFRILRAHKNRFGSTNEIGVFEMKGAGLVEVSDPSALFLSERPVGKSGSVVTSTLNG
CCCCCCEEEHHHHCCCCCCCCEEEEECCCCEEEECCCCEEEEECCCCCCCCCEEEEECCC
TRPLLVEVQALVAPTGYGTARRTAIGVDGNRVALLAAVLEKKEEIPLVGCDLFVNVAGGM
CCCCEEEEEHHHCCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCCEEECEEEEEECCCC
QLTEPACDLAVCAALVSSLQNRPLDPKTLVLGEVGLAGEVRAVGQVEPRLAEAAKMGFQR
EECCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCE
VVMPAGSARRLEDAGPKMKIVGVETLGDALVAMFD
EEECCCCCCHHHHCCCCEEEEEEHHHCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377; 8016066 [H]