| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108757261
Identifier: 108757261
GI number: 108757261
Start: 1409225
End: 1411234
Strand: Reverse
Name: 108757261
Synonym: MXAN_1203
Alternate gene names: NA
Gene position: 1411234-1409225 (Counterclockwise)
Preceding gene: 108761202
Following gene: 108756986
Centisome position: 15.44
GC content: 66.32
Gene sequence:
>2010_bases ATGAATGTCTGGTCCTTCGACACGGAAACGTGGCTGATTCAGCCCGGCTTGCTCGCGCCTCCTCTCGTGTGCGGCAGCAT CGCGGCGGCAGCTCCAGGCAGTGAACGACTGCTGGACAAGGCCCAAGCCCGGCAGTTCTTCCGCGAGGCCATCGCCGCGT CTGACACGCGCCTCGTTGGCGCAAACCTCGCTTACGACCTGGGCGTCATGGCGGCGGATGACCCGAGCCTTGTGGCGCCC ATCTTCGCGGCGCTCGAAGCAGGCCGACTGCATTGTGTCCAGATTCGAGAAGCCCTCATCGACATCGCGAGGGGACTCTA CGGCGTGGACCCGTCGACGGGCCGGAAGCTCGACGATGACGAAGGCGCCCGCTACCCGCTCGCGCTTCTCGTGCAGCGCT ACCTTGGGCTCGACATCAGCGAGGACAAAAAGAACCCGAAGGCATGGCGCCTGCGCTACGCGGAACTCGACGGCGTTCCT GTCGAGCGCTGGCCGACGGAAGCCGCTGCGTACCCGAAGCGAGATGCCCGCTACACGCTCGACGTCTTCTTCCGGCAGGA AGCCGTAGCACGGGAGACGCCCAACGGCGGCAACCTGCATGCCGAAGCCGAGCAGATGCGCGCCGCCTTCGCGCTCCACC TCGCTTCCATCTGGGGACTTCGAACGAACGGTGACTCGGTCGCCGTGCTGCGGGAGCGGGTGGAACGGGAGTGGGGAGAG AACCGGGCCAAGTTCCAGGCGGCAGGCATCTACCGAGCCGACGGCACCAAAGACTCGAAGCGCCTCGCTGCGCTCGTGAC TGCCGCCTATGACGGACAGCCGCCCATTACCGCGCCCAGCGACCGATTCCCCGACGGCCAGGTCGCGACCGACCGTGACA CGCTGCTCGGTTCGGGCGACGCGCTGCTCGAAGACTTGGGCAAGAGCGGGCGCGTCGACAAGTACAAGTCGACTTACCTG GACGTCGTCGAAGCGGGCACCTCGCTCCCCATCAATCCGCGCTTCAACGTGCTCGTTAGCACCACGCGCGTTTCGAGCGA CTACCAGCAGCTCCCGCAGAAGGGCGGCATCCGGGAGGTCCACGAGGCCCGTCCCGGCTTCGCCTACTGCTCGGTCGACT ACGGAGGGCTTGAGCTTCGCACCATGGCTCAGCGGGCCATCTGGGAACTCGGCTACTCGAAGATGGCCGAAGCGCTGAAC AGTGGGCTCGACGTCCACACCCTTGCCGCGGCCGAATTCCTCGGGGCGAGCTACGACGAGCTGCTTCCGAAGGTGAAGGC GAAAGACCCCCTCGCGGTCGCCTTCCGTCAGCTCGCGAAGATTCTCAACTTCGGCAAGGGCGGCGGGATGACGGGCGGCT CGCTCGTCTACAACGCACGCGCGAAGGACCGGGTTTCCTTCTGCCTGCTGGCGAAGCGCGCAGACGTCTGCGGCATCGAG CGCATCGTCATCACCGTGCAGCGCAAGCCGAAGATGGTCTGCCGGGCCTGCGTCGAAGTGGCCAAGGAACTGGACACGAA GTGGCTCAACGCGTGGCCTGAGCAGCGCGAGCTTCAGCAGCGAGCGAAGTCGAGCACCTACGGGGGCGGGTTCGCCGATG TGATGATTCCGGGCGCGAACATCCTGCGCGGCGGGTGCGGCTACACGCAGATTCTCAACACGCCCTTCCAGGGGCTCGGC GCTGTCGGGTGCAAGCTCGCCATGTGGCGCGTCAGCCGCGAGATGTACGTCGACCGTCGCTCGCCGCTCTACGGCTCGCG ACTCGTCCTCATGGTGCATGACGAGCTGATCAGCGAGCTGCCCGCCAATAGCGCCCAGCGGATGCACGACGCAGCCGAGC GCAAGGCGTACCTGATGCGCGAGGCGATGAAGGAGACGACTCCCGACCTGGCACCGGCAATCGAAGCCGAGCCCGCGTTG TCCCGCATCATGTCGAAGGACGTCGCCACCGTGCGCGACAGCTCCGGGCGGCTGCTCGTCTGGGAGCCACCAACAAAGCG CGCTGCCTGA
Upstream 100 bases:
>100_bases CCGACGCCCTCGCCTGAAACCGGGCGGCGACTGACGGCGCGCTTCCGTCGGCGGCTGGCCCACGACACGGGCCGCTTTCC CACTCCCAAAGGCAGCCTTC
Downstream 100 bases:
>100_bases ACCACGGCCGAAATCCGCACCCATTTAGGGAGCACACGCACTCCCTAACAGGTGCAACGCATGGCCAAGACAACCGACGC GCTCGAACAGCTCCCGCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 669; Mature: 669
Protein sequence:
>669_residues MNVWSFDTETWLIQPGLLAPPLVCGSIAAAAPGSERLLDKAQARQFFREAIAASDTRLVGANLAYDLGVMAADDPSLVAP IFAALEAGRLHCVQIREALIDIARGLYGVDPSTGRKLDDDEGARYPLALLVQRYLGLDISEDKKNPKAWRLRYAELDGVP VERWPTEAAAYPKRDARYTLDVFFRQEAVARETPNGGNLHAEAEQMRAAFALHLASIWGLRTNGDSVAVLRERVEREWGE NRAKFQAAGIYRADGTKDSKRLAALVTAAYDGQPPITAPSDRFPDGQVATDRDTLLGSGDALLEDLGKSGRVDKYKSTYL DVVEAGTSLPINPRFNVLVSTTRVSSDYQQLPQKGGIREVHEARPGFAYCSVDYGGLELRTMAQRAIWELGYSKMAEALN SGLDVHTLAAAEFLGASYDELLPKVKAKDPLAVAFRQLAKILNFGKGGGMTGGSLVYNARAKDRVSFCLLAKRADVCGIE RIVITVQRKPKMVCRACVEVAKELDTKWLNAWPEQRELQQRAKSSTYGGGFADVMIPGANILRGGCGYTQILNTPFQGLG AVGCKLAMWRVSREMYVDRRSPLYGSRLVLMVHDELISELPANSAQRMHDAAERKAYLMREAMKETTPDLAPAIEAEPAL SRIMSKDVATVRDSSGRLLVWEPPTKRAA
Sequences:
>Translated_669_residues MNVWSFDTETWLIQPGLLAPPLVCGSIAAAAPGSERLLDKAQARQFFREAIAASDTRLVGANLAYDLGVMAADDPSLVAP IFAALEAGRLHCVQIREALIDIARGLYGVDPSTGRKLDDDEGARYPLALLVQRYLGLDISEDKKNPKAWRLRYAELDGVP VERWPTEAAAYPKRDARYTLDVFFRQEAVARETPNGGNLHAEAEQMRAAFALHLASIWGLRTNGDSVAVLRERVEREWGE NRAKFQAAGIYRADGTKDSKRLAALVTAAYDGQPPITAPSDRFPDGQVATDRDTLLGSGDALLEDLGKSGRVDKYKSTYL DVVEAGTSLPINPRFNVLVSTTRVSSDYQQLPQKGGIREVHEARPGFAYCSVDYGGLELRTMAQRAIWELGYSKMAEALN SGLDVHTLAAAEFLGASYDELLPKVKAKDPLAVAFRQLAKILNFGKGGGMTGGSLVYNARAKDRVSFCLLAKRADVCGIE RIVITVQRKPKMVCRACVEVAKELDTKWLNAWPEQRELQQRAKSSTYGGGFADVMIPGANILRGGCGYTQILNTPFQGLG AVGCKLAMWRVSREMYVDRRSPLYGSRLVLMVHDELISELPANSAQRMHDAAERKAYLMREAMKETTPDLAPAIEAEPAL SRIMSKDVATVRDSSGRLLVWEPPTKRAA >Mature_669_residues MNVWSFDTETWLIQPGLLAPPLVCGSIAAAAPGSERLLDKAQARQFFREAIAASDTRLVGANLAYDLGVMAADDPSLVAP IFAALEAGRLHCVQIREALIDIARGLYGVDPSTGRKLDDDEGARYPLALLVQRYLGLDISEDKKNPKAWRLRYAELDGVP VERWPTEAAAYPKRDARYTLDVFFRQEAVARETPNGGNLHAEAEQMRAAFALHLASIWGLRTNGDSVAVLRERVEREWGE NRAKFQAAGIYRADGTKDSKRLAALVTAAYDGQPPITAPSDRFPDGQVATDRDTLLGSGDALLEDLGKSGRVDKYKSTYL DVVEAGTSLPINPRFNVLVSTTRVSSDYQQLPQKGGIREVHEARPGFAYCSVDYGGLELRTMAQRAIWELGYSKMAEALN SGLDVHTLAAAEFLGASYDELLPKVKAKDPLAVAFRQLAKILNFGKGGGMTGGSLVYNARAKDRVSFCLLAKRADVCGIE RIVITVQRKPKMVCRACVEVAKELDTKWLNAWPEQRELQQRAKSSTYGGGFADVMIPGANILRGGCGYTQILNTPFQGLG AVGCKLAMWRVSREMYVDRRSPLYGSRLVLMVHDELISELPANSAQRMHDAAERKAYLMREAMKETTPDLAPAIEAEPAL SRIMSKDVATVRDSSGRLLVWEPPTKRAA
Specific function: Unknown
COG id: COG0749
COG function: function code L; DNA polymerase I - 3'-5' exonuclease and polymerase domains
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 73394; Mature: 73394
Theoretical pI: Translated: 8.12; Mature: 8.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVWSFDTETWLIQPGLLAPPLVCGSIAAAAPGSERLLDKAQARQFFREAIAASDTRLVG CCCCCCCCCEEEECCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEE ANLAYDLGVMAADDPSLVAPIFAALEAGRLHCVQIREALIDIARGLYGVDPSTGRKLDDD CCHHHHCCEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC EGARYPLALLVQRYLGLDISEDKKNPKAWRLRYAELDGVPVERWPTEAAAYPKRDARYTL CCCCCHHHHHHHHHHCCCCCCCCCCCHHHEEEEECCCCCCCCCCCCHHHCCCCCCCCEEE DVFFRQEAVARETPNGGNLHAEAEQMRAAFALHLASIWGLRTNGDSVAVLRERVEREWGE HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC NRAKFQAAGIYRADGTKDSKRLAALVTAAYDGQPPITAPSDRFPDGQVATDRDTLLGSGD CHHHEEECCEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCH ALLEDLGKSGRVDKYKSTYLDVVEAGTSLPINPRFNVLVSTTRVSSDYQQLPQKGGIREV HHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCHHHHHHHHCCCCHHH HEARPGFAYCSVDYGGLELRTMAQRAIWELGYSKMAEALNSGLDVHTLAAAEFLGASYDE HHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHH LLPKVKAKDPLAVAFRQLAKILNFGKGGGMTGGSLVYNARAKDRVSFCLLAKRADVCGIE HCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCE RIVITVQRKPKMVCRACVEVAKELDTKWLNAWPEQRELQQRAKSSTYGGGFADVMIPGAN EEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEEECCHH ILRGGCGYTQILNTPFQGLGAVGCKLAMWRVSREMYVDRRSPLYGSRLVLMVHDELISEL HHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEHHHHHHC PANSAQRMHDAAERKAYLMREAMKETTPDLAPAIEAEPALSRIMSKDVATVRDSSGRLLV CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEE WEPPTKRAA ECCCCCCCC >Mature Secondary Structure MNVWSFDTETWLIQPGLLAPPLVCGSIAAAAPGSERLLDKAQARQFFREAIAASDTRLVG CCCCCCCCCEEEECCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEE ANLAYDLGVMAADDPSLVAPIFAALEAGRLHCVQIREALIDIARGLYGVDPSTGRKLDDD CCHHHHCCEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC EGARYPLALLVQRYLGLDISEDKKNPKAWRLRYAELDGVPVERWPTEAAAYPKRDARYTL CCCCCHHHHHHHHHHCCCCCCCCCCCHHHEEEEECCCCCCCCCCCCHHHCCCCCCCCEEE DVFFRQEAVARETPNGGNLHAEAEQMRAAFALHLASIWGLRTNGDSVAVLRERVEREWGE HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC NRAKFQAAGIYRADGTKDSKRLAALVTAAYDGQPPITAPSDRFPDGQVATDRDTLLGSGD CHHHEEECCEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCH ALLEDLGKSGRVDKYKSTYLDVVEAGTSLPINPRFNVLVSTTRVSSDYQQLPQKGGIREV HHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCHHHHHHHHCCCCHHH HEARPGFAYCSVDYGGLELRTMAQRAIWELGYSKMAEALNSGLDVHTLAAAEFLGASYDE HHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHH LLPKVKAKDPLAVAFRQLAKILNFGKGGGMTGGSLVYNARAKDRVSFCLLAKRADVCGIE HCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCE RIVITVQRKPKMVCRACVEVAKELDTKWLNAWPEQRELQQRAKSSTYGGGFADVMIPGAN EEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEEECCHH ILRGGCGYTQILNTPFQGLGAVGCKLAMWRVSREMYVDRRSPLYGSRLVLMVHDELISEL HHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEHHHHHHC PANSAQRMHDAAERKAYLMREAMKETTPDLAPAIEAEPALSRIMSKDVATVRDSSGRLLV CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEE WEPPTKRAA ECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA