| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108757246
Identifier: 108757246
GI number: 108757246
Start: 3642849
End: 3645080
Strand: Direct
Name: 108757246
Synonym: MXAN_3108
Alternate gene names: NA
Gene position: 3642849-3645080 (Clockwise)
Preceding gene: 108762982
Following gene: 108759777
Centisome position: 39.86
GC content: 70.39
Gene sequence:
>2232_bases ATGGCCACCCTGGTCGTCCGTCACCCCGACGGCACTGAGAACGAATTCGCCATCACGGGCGAGCTGAAGATTGGCCGCCA GCAGGGCAGTGACATCCTCATCACCGAAGGGGGCGTGTCGCGTACGCACGCGCGCGTCTTCGACGAAGGCGGCACCGTCT TCATCGAGGACGTGGGCAGCGCCAACGGCACGTTCGTCGACGGCCAGCGCATCATGGAGCCCACGGCCCTGACGCCGCAG TCGGAGGTCCTCCTCGGGGACTACGTGCTGCGTCTCAAACCGGCCGCGGTGCGGGGTTCTGGGGCCCGGCGCTCGGCGGC CAGGCCCGCGGCGGGGGGCGATGAGCCCATGCCGGTGGGCGACGAGGGCGGCGGTGTACGCGCCACCCGGGCCATGCCCA GCATCAAGAAGGGCTCCGGCGCAGCGAAGAGCGAGCCCGGCGCGGCGCTGGCGAAGCGGCCCGCGCGTCCGGCACGTCCC GCCCCGGGTGGCGGCGCACGTCCGGCGCCGGCGGGTGGCCCGGTGCTTCGCGGCATGGTCGGTCCCTGGGCCGGCCAGAC ATATCCGCTCAAGGGCAAGGTGCTGGTGGGGCGGCAGCCGCCCGCCGGCATCATGCTGGATGACGACTCCGTGAGCCGCC GCCACGCGGAGCTGGAAGCGACCAGCTCGGGCGTGACGGTGCGGGACCTGGGCAGCGCCAACGGGACGCTGCTCAACGGC GAGCCGTTGGACCAGACGCCGGTCCCGCTCGAGCCGGGGGATCAGCTCCAGTTCGGCGTGGTGGAGATGACCTTCGAGCC CGAACCGTCCGCGGTGCCCGTGCGCCGGGGCGCGGCGGGCGCGGCGCGTGGGGGCGCGGACGAGGATCCCGCCGCCAAGC GCAAGAAGCTCATCATGGTGGCGGCCGGGCTGGTGGGCGTGCTGCTGATGGTGGGCATGGTGTCCTCCATCCTGAACCCC AAGCCGGTGGACGTTCAGGGGCCGGGCGGGGCCGCGCAGATGGATCCGACGCAGAAGATCCAGGACCTGCTGAGCGAGTG CCGCTCCTACGCATCCAGCGAGCTGGGCGCCCCCAACTGGGAGAAGGCCCACGAGGTCTGCACCCAGGCATTGGACCTGG ACCCCATCCACCCGGAGGCGAACACGCTCATCCGGCGCATCAAGCTGGAGAAGGAGTCCTTCGAGTACTACTCGCAGGGC GAGCGGCTCCTGCAGCGCCTCAAGCCGGAAGAGGCCCTGGAGTCGTTCCGGAAGATCCAGAAGGAGAGCGAGTACTTCCG CCGCGCCCGCGCCAAGGCGCGCGAGGCCGCCGAGGCGGTGACGAAGCGCGCACAGGAGGACTGCAAGCTGTACCTGCGTG ACTCGCAGTGGAGCGCCGCCGTGTCACGCTGCGAGGTGTACATGGCGGTGTGGTGCCAGTCGAAGCCGCGCGAGGACCTG CAGCCGCCCCTGGGCTTCACGCTGAAGCTGGAGGGCCGCCTGCGCCGCGACGAGTGGCGGCCGAAGGATCCGATGTTCGT GAAGTTCCTCATCGCGCGGCAGAAGATGGACGCCAACGCGGCGCCCTGGGTGTGCCCGGTGGCGGAGGTTCTGGCCGGTG ACGAGCGGGTCGCGGACCCGCGCACCTTCGTCATGGAGGCGGCGAAGAAGCGCTTCCCCAACAAGCTGATGCAGGCCGCG CTCCTGGACTACTGGGGTGGCCGTGGCAGCGAGGCGCTGGCCACCATGCAGAAGCTGCGCGCCAACTACGAGGCCGCGCA GTACCACGCCGAGGCGGACGAGCTGATGAAGATCATGTCCACCGTGGATCAGCTCTTCAAGGTGGGCCAGAGCTATCTGG CCGCCGAGGATCCGGAGAAGGCCGCGGAGCCCTTCCGCGAGGCGCTGGCCACGGACAAGGCGGTGATGCTGGAGCTCGCG GAGTCCAAGCCGTCCTTCTACCGGCGCAACATCCTCCAGGACATCGCGGAGAAGTCGTACCAGCGCGGCAAGCACTGGGC CGACCGCGAGGACCGCCGCCGCGCCTGCCGCGTGTGGAAGCTGGGGTTCAGCTTCTACGCGGGCAATCCGAACCTGAACA AGGCGGCGGCCTTCTGCTCCTCGAGGGCACTGGAGGCCTTCCGTGCGGCGTCGGGCTGCGGCGACATGGCGGTGGCGCTG GACTACGCCGTCAAGGGCGACGGTGTGGAGGAGATGGTCGTCGCGAAGCAGGCGGAGCTGGGCTGCAAGTAG
Upstream 100 bases:
>100_bases CGCTACGTCGCCTCCGGCTTCGTGCCGAAGTTCTACGACGAGCTGCAGCGTAAGGGCATCCCCGTCAACATGAGCATCTT CCGCGAGGACTGACGCGCCC
Downstream 100 bases:
>100_bases CACGCGTCGTGGACAGGGCCGGGCGGGCGCGCTAGGCACGGGGGCATGGTCGACACCAGCCCTTCGCGCTCCGCGCCCAC CCTGGTCCTCATCGACGCGT
Product: FHA domain- TPR-repeat-containing protein
Products: NA
Alternate protein names: Sigma-54 Dependent Trancsriptional Regulator; FHA Domain- TPR-Repeat-Containing Protein; Fha Domain/Tetratricopeptide Repeat Protein; FHA Domain-Containing Protein; Type II/IV Secretion System Protein
Number of amino acids: Translated: 743; Mature: 742
Protein sequence:
>743_residues MATLVVRHPDGTENEFAITGELKIGRQQGSDILITEGGVSRTHARVFDEGGTVFIEDVGSANGTFVDGQRIMEPTALTPQ SEVLLGDYVLRLKPAAVRGSGARRSAARPAAGGDEPMPVGDEGGGVRATRAMPSIKKGSGAAKSEPGAALAKRPARPARP APGGGARPAPAGGPVLRGMVGPWAGQTYPLKGKVLVGRQPPAGIMLDDDSVSRRHAELEATSSGVTVRDLGSANGTLLNG EPLDQTPVPLEPGDQLQFGVVEMTFEPEPSAVPVRRGAAGAARGGADEDPAAKRKKLIMVAAGLVGVLLMVGMVSSILNP KPVDVQGPGGAAQMDPTQKIQDLLSECRSYASSELGAPNWEKAHEVCTQALDLDPIHPEANTLIRRIKLEKESFEYYSQG ERLLQRLKPEEALESFRKIQKESEYFRRARAKAREAAEAVTKRAQEDCKLYLRDSQWSAAVSRCEVYMAVWCQSKPREDL QPPLGFTLKLEGRLRRDEWRPKDPMFVKFLIARQKMDANAAPWVCPVAEVLAGDERVADPRTFVMEAAKKRFPNKLMQAA LLDYWGGRGSEALATMQKLRANYEAAQYHAEADELMKIMSTVDQLFKVGQSYLAAEDPEKAAEPFREALATDKAVMLELA ESKPSFYRRNILQDIAEKSYQRGKHWADREDRRRACRVWKLGFSFYAGNPNLNKAAAFCSSRALEAFRAASGCGDMAVAL DYAVKGDGVEEMVVAKQAELGCK
Sequences:
>Translated_743_residues MATLVVRHPDGTENEFAITGELKIGRQQGSDILITEGGVSRTHARVFDEGGTVFIEDVGSANGTFVDGQRIMEPTALTPQ SEVLLGDYVLRLKPAAVRGSGARRSAARPAAGGDEPMPVGDEGGGVRATRAMPSIKKGSGAAKSEPGAALAKRPARPARP APGGGARPAPAGGPVLRGMVGPWAGQTYPLKGKVLVGRQPPAGIMLDDDSVSRRHAELEATSSGVTVRDLGSANGTLLNG EPLDQTPVPLEPGDQLQFGVVEMTFEPEPSAVPVRRGAAGAARGGADEDPAAKRKKLIMVAAGLVGVLLMVGMVSSILNP KPVDVQGPGGAAQMDPTQKIQDLLSECRSYASSELGAPNWEKAHEVCTQALDLDPIHPEANTLIRRIKLEKESFEYYSQG ERLLQRLKPEEALESFRKIQKESEYFRRARAKAREAAEAVTKRAQEDCKLYLRDSQWSAAVSRCEVYMAVWCQSKPREDL QPPLGFTLKLEGRLRRDEWRPKDPMFVKFLIARQKMDANAAPWVCPVAEVLAGDERVADPRTFVMEAAKKRFPNKLMQAA LLDYWGGRGSEALATMQKLRANYEAAQYHAEADELMKIMSTVDQLFKVGQSYLAAEDPEKAAEPFREALATDKAVMLELA ESKPSFYRRNILQDIAEKSYQRGKHWADREDRRRACRVWKLGFSFYAGNPNLNKAAAFCSSRALEAFRAASGCGDMAVAL DYAVKGDGVEEMVVAKQAELGCK >Mature_742_residues ATLVVRHPDGTENEFAITGELKIGRQQGSDILITEGGVSRTHARVFDEGGTVFIEDVGSANGTFVDGQRIMEPTALTPQS EVLLGDYVLRLKPAAVRGSGARRSAARPAAGGDEPMPVGDEGGGVRATRAMPSIKKGSGAAKSEPGAALAKRPARPARPA PGGGARPAPAGGPVLRGMVGPWAGQTYPLKGKVLVGRQPPAGIMLDDDSVSRRHAELEATSSGVTVRDLGSANGTLLNGE PLDQTPVPLEPGDQLQFGVVEMTFEPEPSAVPVRRGAAGAARGGADEDPAAKRKKLIMVAAGLVGVLLMVGMVSSILNPK PVDVQGPGGAAQMDPTQKIQDLLSECRSYASSELGAPNWEKAHEVCTQALDLDPIHPEANTLIRRIKLEKESFEYYSQGE RLLQRLKPEEALESFRKIQKESEYFRRARAKAREAAEAVTKRAQEDCKLYLRDSQWSAAVSRCEVYMAVWCQSKPREDLQ PPLGFTLKLEGRLRRDEWRPKDPMFVKFLIARQKMDANAAPWVCPVAEVLAGDERVADPRTFVMEAAKKRFPNKLMQAAL LDYWGGRGSEALATMQKLRANYEAAQYHAEADELMKIMSTVDQLFKVGQSYLAAEDPEKAAEPFREALATDKAVMLELAE SKPSFYRRNILQDIAEKSYQRGKHWADREDRRRACRVWKLGFSFYAGNPNLNKAAAFCSSRALEAFRAASGCGDMAVALD YAVKGDGVEEMVVAKQAELGCK
Specific function: Unknown
COG id: COG1716
COG function: function code T; FOG: FHA domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 80654; Mature: 80523
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: PS50006 FHA_DOMAIN ; PS50005 TPR L=RR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATLVVRHPDGTENEFAITGELKIGRQQGSDILITEGGVSRTHARVFDEGGTVFIEDVGS CCEEEEECCCCCCCCEEEEEEEEECCCCCCEEEEECCCCCHHHHHEECCCCEEEEEECCC ANGTFVDGQRIMEPTALTPQSEVLLGDYVLRLKPAAVRGSGARRSAARPAAGGDEPMPVG CCCCEECCHHHCCCCCCCCCCHHHHHHHHHEECCHHHCCCCCCCCCCCCCCCCCCCCCCC DEGGGVRATRAMPSIKKGSGAAKSEPGAALAKRPARPARPAPGGGARPAPAGGPVLRGMV CCCCCEEHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCC GPWAGQTYPLKGKVLVGRQPPAGIMLDDDSVSRRHAELEATSSGVTVRDLGSANGTLLNG CCCCCCCCCCCCEEEECCCCCCCEEECCCHHHHHHHHHHHCCCCCEEEECCCCCCEEECC EPLDQTPVPLEPGDQLQFGVVEMTFEPEPSAVPVRRGAAGAARGGADEDPAAKRKKLIMV CCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH AAGLVGVLLMVGMVSSILNPKPVDVQGPGGAAQMDPTQKIQDLLSECRSYASSELGAPNW HHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCH EKAHEVCTQALDLDPIHPEANTLIRRIKLEKESFEYYSQGERLLQRLKPEEALESFRKIQ HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH KESEYFRRARAKAREAAEAVTKRAQEDCKLYLRDSQWSAAVSRCEVYMAVWCQSKPREDL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHCCCCCHHHC QPPLGFTLKLEGRLRRDEWRPKDPMFVKFLIARQKMDANAAPWVCPVAEVLAGDERVADP CCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCH RTFVMEAAKKRFPNKLMQAALLDYWGGRGSEALATMQKLRANYEAAQYHAEADELMKIMS HHHHHHHHHHHCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHH TVDQLFKVGQSYLAAEDPEKAAEPFREALATDKAVMLELAESKPSFYRRNILQDIAEKSY HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHH QRGKHWADREDRRRACRVWKLGFSFYAGNPNLNKAAAFCSSRALEAFRAASGCGDMAVAL HCCCCCCCHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEE DYAVKGDGVEEMVVAKQAELGCK EHHCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure ATLVVRHPDGTENEFAITGELKIGRQQGSDILITEGGVSRTHARVFDEGGTVFIEDVGS CEEEEECCCCCCCCEEEEEEEEECCCCCCEEEEECCCCCHHHHHEECCCCEEEEEECCC ANGTFVDGQRIMEPTALTPQSEVLLGDYVLRLKPAAVRGSGARRSAARPAAGGDEPMPVG CCCCEECCHHHCCCCCCCCCCHHHHHHHHHEECCHHHCCCCCCCCCCCCCCCCCCCCCCC DEGGGVRATRAMPSIKKGSGAAKSEPGAALAKRPARPARPAPGGGARPAPAGGPVLRGMV CCCCCEEHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCC GPWAGQTYPLKGKVLVGRQPPAGIMLDDDSVSRRHAELEATSSGVTVRDLGSANGTLLNG CCCCCCCCCCCCEEEECCCCCCCEEECCCHHHHHHHHHHHCCCCCEEEECCCCCCEEECC EPLDQTPVPLEPGDQLQFGVVEMTFEPEPSAVPVRRGAAGAARGGADEDPAAKRKKLIMV CCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH AAGLVGVLLMVGMVSSILNPKPVDVQGPGGAAQMDPTQKIQDLLSECRSYASSELGAPNW HHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCH EKAHEVCTQALDLDPIHPEANTLIRRIKLEKESFEYYSQGERLLQRLKPEEALESFRKIQ HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH KESEYFRRARAKAREAAEAVTKRAQEDCKLYLRDSQWSAAVSRCEVYMAVWCQSKPREDL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHCCCCCHHHC QPPLGFTLKLEGRLRRDEWRPKDPMFVKFLIARQKMDANAAPWVCPVAEVLAGDERVADP CCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCH RTFVMEAAKKRFPNKLMQAALLDYWGGRGSEALATMQKLRANYEAAQYHAEADELMKIMS HHHHHHHHHHHCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHH TVDQLFKVGQSYLAAEDPEKAAEPFREALATDKAVMLELAESKPSFYRRNILQDIAEKSY HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHH QRGKHWADREDRRRACRVWKLGFSFYAGNPNLNKAAAFCSSRALEAFRAASGCGDMAVAL HCCCCCCCHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEE DYAVKGDGVEEMVVAKQAELGCK EHHCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA