| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is kdpD [C]
Identifier: 108757184
GI number: 108757184
Start: 189029
End: 190387
Strand: Reverse
Name: kdpD [C]
Synonym: MXAN_0153
Alternate gene names: 108757184
Gene position: 190387-189029 (Counterclockwise)
Preceding gene: 108762720
Following gene: 108760393
Centisome position: 2.08
GC content: 73.58
Gene sequence:
>1359_bases ATGAGTCCGCGCTCCGCCGGGCGACAGGCCCTCCTGTCCTCGTTCCGGCGGTGGACGCGCGCCCAGGATGCCGCGGAGGT GCTGGCCGCCTCGGGCCTGGGCGCGTGGCTCGCGCTCTGTGCCTTCGTGCCGAGCCTGCTGGCCATGACGGCCTGGGCCC CCGGCGCGCGGAGCTTCTTCGGCATCCACTTCGGCACCGCGCTGCTGTGCGCCGCGCCCATGTTGACCAGCGGCGTCCTG TTCTCGCTCGTCCACCGGCGGCGCCGCCGCATCGAGCCCTGGGGCTGGGGGTGGCTCATCTTCGGCGTGGCGACGATGCA CTTCTTCGTGGCCGCGCTGATGGCCCTGTCGGCGCCGCCAGGGGCCGCCGTCATCGCCTCGCTGTTCCTCTTCACCACCG CCTTCCATGGCCGGCTGCACCGGGTGACGCCGCGCCAGCCCTTCCTCGCCCTGGGCACCGCGCTGGCCCTGGCGCTGGCC CTGCCCCTGCGCGGCAGCGACGAACACCTGGCCCTCTTCGGCGTCATCGGACCCGCGGCGCTCACCGCCCAGCTCTATCT GGGGACCTTCGCCGTGCAGCATGACCGGGCCCGCGCGGACGCGGAGCGCCTGCGCGCCGCCGTGCACGCGCAACTGCTGG AGCAGCAGGAGCGCGACGTGGGCCGCCTGTCGCAGGCGCTGTCGGAAATCCTGGGCTACCACCACGACATCGACAACGCG CTCATGGCGGCGGGCAGCGCGGCGGACATGCTGGCCGTGGTGGGCGCGCACCGCCCGGGCCCCGGCCGCACCGAGTTCGA CGACCTGCTCCGGCAGCTCAACGACAACCTGACGCAGATACGGGACATGATGATGGACGCCCGCAACAAGGGGCGGCGCC ATGCCGGCATGGAGCCGGAGCCCGTGGAGCTGGCGCCGGTGCTGGACTCGGTGCAGGCCAGCGTGGGCCTGCGCTTCCCG GACGTGGACATCCAGGTGGAGGTGGAGCAGCCCTCCCCGCCCCTGCGCGCCCTGATGCGCGGCGGCGCGCCCACGCTGCG CCGCGTGGTGGAGAACCTGGTGCTCAACGCCTGCGAGGGCAACGGCGAGGAAGGCGCCGCGCGGGTCCACATCCATGCGC GCGTGGAGCCGCTCAGCGGGCGCCTGGAGGTCACGATTACAGATGATGGCCCCGGCTTCCCGCCCGGCCAGCTCAGCCGC CCCGCCGAGGCGCTGTACACCAGCAAGTCCCACGCGACGGGCCTGGGCCTCTACACCAGCGAGTGCCTCCTGCGCGCCAG CGGCGGCATGCTGCACCGGCGGAACGCGACAGGGGGCGGCGCCGTGCTCCGCATGGTCCTTCCCAGGGAGTACCGATGA
Upstream 100 bases:
>100_bases GCAACGCGGACATCGTCAACGAACTGAACCTCCGGGCCGAACGCGCCACCGAGGAGTCGTCCAGCCTGGGTACGGCGGGT GACATCCTGTCCGCCACCGT
Downstream 100 bases:
>100_bases GCGGCGGAGCCCTGTACCAGGAGTCGCTGCGCGCGCTTCGCCGGCTGGGCTTGCCGGAGGTGTCGGAGCGGGACGTGCTC GCGGCGCTGGAGGCGGCGCA
Product: ATPase domain-containing protein
Products: NA
Alternate protein names: Signal Transduction Histidine Kinase; Histidine Kinase; PAS/PAC Sensor Signal Transduction Histidine Kinase; PAS/PAC Sensor Hybrid Histidine Kinase; Periplasmic Sensor Signal Transduction Histidine Kinase; Two-Component Sensor; HAMP Domain-Containing Sensor Histidine Kinase; ATPase Domain-Containing Protein; Flagellar Regulatory Protein B
Number of amino acids: Translated: 452; Mature: 451
Protein sequence:
>452_residues MSPRSAGRQALLSSFRRWTRAQDAAEVLAASGLGAWLALCAFVPSLLAMTAWAPGARSFFGIHFGTALLCAAPMLTSGVL FSLVHRRRRRIEPWGWGWLIFGVATMHFFVAALMALSAPPGAAVIASLFLFTTAFHGRLHRVTPRQPFLALGTALALALA LPLRGSDEHLALFGVIGPAALTAQLYLGTFAVQHDRARADAERLRAAVHAQLLEQQERDVGRLSQALSEILGYHHDIDNA LMAAGSAADMLAVVGAHRPGPGRTEFDDLLRQLNDNLTQIRDMMMDARNKGRRHAGMEPEPVELAPVLDSVQASVGLRFP DVDIQVEVEQPSPPLRALMRGGAPTLRRVVENLVLNACEGNGEEGAARVHIHARVEPLSGRLEVTITDDGPGFPPGQLSR PAEALYTSKSHATGLGLYTSECLLRASGGMLHRRNATGGGAVLRMVLPREYR
Sequences:
>Translated_452_residues MSPRSAGRQALLSSFRRWTRAQDAAEVLAASGLGAWLALCAFVPSLLAMTAWAPGARSFFGIHFGTALLCAAPMLTSGVL FSLVHRRRRRIEPWGWGWLIFGVATMHFFVAALMALSAPPGAAVIASLFLFTTAFHGRLHRVTPRQPFLALGTALALALA LPLRGSDEHLALFGVIGPAALTAQLYLGTFAVQHDRARADAERLRAAVHAQLLEQQERDVGRLSQALSEILGYHHDIDNA LMAAGSAADMLAVVGAHRPGPGRTEFDDLLRQLNDNLTQIRDMMMDARNKGRRHAGMEPEPVELAPVLDSVQASVGLRFP DVDIQVEVEQPSPPLRALMRGGAPTLRRVVENLVLNACEGNGEEGAARVHIHARVEPLSGRLEVTITDDGPGFPPGQLSR PAEALYTSKSHATGLGLYTSECLLRASGGMLHRRNATGGGAVLRMVLPREYR >Mature_451_residues SPRSAGRQALLSSFRRWTRAQDAAEVLAASGLGAWLALCAFVPSLLAMTAWAPGARSFFGIHFGTALLCAAPMLTSGVLF SLVHRRRRRIEPWGWGWLIFGVATMHFFVAALMALSAPPGAAVIASLFLFTTAFHGRLHRVTPRQPFLALGTALALALAL PLRGSDEHLALFGVIGPAALTAQLYLGTFAVQHDRARADAERLRAAVHAQLLEQQERDVGRLSQALSEILGYHHDIDNAL MAAGSAADMLAVVGAHRPGPGRTEFDDLLRQLNDNLTQIRDMMMDARNKGRRHAGMEPEPVELAPVLDSVQASVGLRFPD VDIQVEVEQPSPPLRALMRGGAPTLRRVVENLVLNACEGNGEEGAARVHIHARVEPLSGRLEVTITDDGPGFPPGQLSRP AEALYTSKSHATGLGLYTSECLLRASGGMLHRRNATGGGAVLRMVLPREYR
Specific function: Member Of The Two-Component Regulatory System Kdpd/Kdpe Involved In The Regulation Of The Kdp Operon. Kdpd May Function As A Membrane-Associated Protein Kinase That Phosphorylates Kdpe In Response To Environmental Signals. [C]
COG id: COG4191
COG function: function code T; Signal transduction histidine kinase regulating C4-dicarboxylate transport system
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.7.3.- [C]
Molecular weight: Translated: 48721; Mature: 48590
Theoretical pI: Translated: 9.29; Mature: 9.29
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPRSAGRQALLSSFRRWTRAQDAAEVLAASGLGAWLALCAFVPSLLAMTAWAPGARSFF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHH GIHFGTALLCAAPMLTSGVLFSLVHRRRRRIEPWGWGWLIFGVATMHFFVAALMALSAPP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC GAAVIASLFLFTTAFHGRLHRVTPRQPFLALGTALALALALPLRGSDEHLALFGVIGPAA HHHHHHHHHHHHHHHHCHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHH LTAQLYLGTFAVQHDRARADAERLRAAVHAQLLEQQERDVGRLSQALSEILGYHHDIDNA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH LMAAGSAADMLAVVGAHRPGPGRTEFDDLLRQLNDNLTQIRDMMMDARNKGRRHAGMEPE HHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCC PVELAPVLDSVQASVGLRFPDVDIQVEVEQPSPPLRALMRGGAPTLRRVVENLVLNACEG CCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCC NGEEGAARVHIHARVEPLSGRLEVTITDDGPGFPPGQLSRPAEALYTSKSHATGLGLYTS CCCCCCEEEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHH ECLLRASGGMLHRRNATGGGAVLRMVLPREYR HHHHHHCCCCEEECCCCCCHHHHHHHCCCCCC >Mature Secondary Structure SPRSAGRQALLSSFRRWTRAQDAAEVLAASGLGAWLALCAFVPSLLAMTAWAPGARSFF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHH GIHFGTALLCAAPMLTSGVLFSLVHRRRRRIEPWGWGWLIFGVATMHFFVAALMALSAPP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC GAAVIASLFLFTTAFHGRLHRVTPRQPFLALGTALALALALPLRGSDEHLALFGVIGPAA HHHHHHHHHHHHHHHHCHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHH LTAQLYLGTFAVQHDRARADAERLRAAVHAQLLEQQERDVGRLSQALSEILGYHHDIDNA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH LMAAGSAADMLAVVGAHRPGPGRTEFDDLLRQLNDNLTQIRDMMMDARNKGRRHAGMEPE HHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCC PVELAPVLDSVQASVGLRFPDVDIQVEVEQPSPPLRALMRGGAPTLRRVVENLVLNACEG CCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCC NGEEGAARVHIHARVEPLSGRLEVTITDDGPGFPPGQLSRPAEALYTSKSHATGLGLYTS CCCCCCEEEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHH ECLLRASGGMLHRRNATGGGAVLRMVLPREYR HHHHHHCCCCEEECCCCCCHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferring phosphorus-containing groups [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA