Definition Myxococcus xanthus DK 1622 chromosome, complete genome.
Accession NC_008095
Length 9,139,763

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The map label for this gene is kdpD [C]

Identifier: 108757184

GI number: 108757184

Start: 189029

End: 190387

Strand: Reverse

Name: kdpD [C]

Synonym: MXAN_0153

Alternate gene names: 108757184

Gene position: 190387-189029 (Counterclockwise)

Preceding gene: 108762720

Following gene: 108760393

Centisome position: 2.08

GC content: 73.58

Gene sequence:

>1359_bases
ATGAGTCCGCGCTCCGCCGGGCGACAGGCCCTCCTGTCCTCGTTCCGGCGGTGGACGCGCGCCCAGGATGCCGCGGAGGT
GCTGGCCGCCTCGGGCCTGGGCGCGTGGCTCGCGCTCTGTGCCTTCGTGCCGAGCCTGCTGGCCATGACGGCCTGGGCCC
CCGGCGCGCGGAGCTTCTTCGGCATCCACTTCGGCACCGCGCTGCTGTGCGCCGCGCCCATGTTGACCAGCGGCGTCCTG
TTCTCGCTCGTCCACCGGCGGCGCCGCCGCATCGAGCCCTGGGGCTGGGGGTGGCTCATCTTCGGCGTGGCGACGATGCA
CTTCTTCGTGGCCGCGCTGATGGCCCTGTCGGCGCCGCCAGGGGCCGCCGTCATCGCCTCGCTGTTCCTCTTCACCACCG
CCTTCCATGGCCGGCTGCACCGGGTGACGCCGCGCCAGCCCTTCCTCGCCCTGGGCACCGCGCTGGCCCTGGCGCTGGCC
CTGCCCCTGCGCGGCAGCGACGAACACCTGGCCCTCTTCGGCGTCATCGGACCCGCGGCGCTCACCGCCCAGCTCTATCT
GGGGACCTTCGCCGTGCAGCATGACCGGGCCCGCGCGGACGCGGAGCGCCTGCGCGCCGCCGTGCACGCGCAACTGCTGG
AGCAGCAGGAGCGCGACGTGGGCCGCCTGTCGCAGGCGCTGTCGGAAATCCTGGGCTACCACCACGACATCGACAACGCG
CTCATGGCGGCGGGCAGCGCGGCGGACATGCTGGCCGTGGTGGGCGCGCACCGCCCGGGCCCCGGCCGCACCGAGTTCGA
CGACCTGCTCCGGCAGCTCAACGACAACCTGACGCAGATACGGGACATGATGATGGACGCCCGCAACAAGGGGCGGCGCC
ATGCCGGCATGGAGCCGGAGCCCGTGGAGCTGGCGCCGGTGCTGGACTCGGTGCAGGCCAGCGTGGGCCTGCGCTTCCCG
GACGTGGACATCCAGGTGGAGGTGGAGCAGCCCTCCCCGCCCCTGCGCGCCCTGATGCGCGGCGGCGCGCCCACGCTGCG
CCGCGTGGTGGAGAACCTGGTGCTCAACGCCTGCGAGGGCAACGGCGAGGAAGGCGCCGCGCGGGTCCACATCCATGCGC
GCGTGGAGCCGCTCAGCGGGCGCCTGGAGGTCACGATTACAGATGATGGCCCCGGCTTCCCGCCCGGCCAGCTCAGCCGC
CCCGCCGAGGCGCTGTACACCAGCAAGTCCCACGCGACGGGCCTGGGCCTCTACACCAGCGAGTGCCTCCTGCGCGCCAG
CGGCGGCATGCTGCACCGGCGGAACGCGACAGGGGGCGGCGCCGTGCTCCGCATGGTCCTTCCCAGGGAGTACCGATGA

Upstream 100 bases:

>100_bases
GCAACGCGGACATCGTCAACGAACTGAACCTCCGGGCCGAACGCGCCACCGAGGAGTCGTCCAGCCTGGGTACGGCGGGT
GACATCCTGTCCGCCACCGT

Downstream 100 bases:

>100_bases
GCGGCGGAGCCCTGTACCAGGAGTCGCTGCGCGCGCTTCGCCGGCTGGGCTTGCCGGAGGTGTCGGAGCGGGACGTGCTC
GCGGCGCTGGAGGCGGCGCA

Product: ATPase domain-containing protein

Products: NA

Alternate protein names: Signal Transduction Histidine Kinase; Histidine Kinase; PAS/PAC Sensor Signal Transduction Histidine Kinase; PAS/PAC Sensor Hybrid Histidine Kinase; Periplasmic Sensor Signal Transduction Histidine Kinase; Two-Component Sensor; HAMP Domain-Containing Sensor Histidine Kinase; ATPase Domain-Containing Protein; Flagellar Regulatory Protein B

Number of amino acids: Translated: 452; Mature: 451

Protein sequence:

>452_residues
MSPRSAGRQALLSSFRRWTRAQDAAEVLAASGLGAWLALCAFVPSLLAMTAWAPGARSFFGIHFGTALLCAAPMLTSGVL
FSLVHRRRRRIEPWGWGWLIFGVATMHFFVAALMALSAPPGAAVIASLFLFTTAFHGRLHRVTPRQPFLALGTALALALA
LPLRGSDEHLALFGVIGPAALTAQLYLGTFAVQHDRARADAERLRAAVHAQLLEQQERDVGRLSQALSEILGYHHDIDNA
LMAAGSAADMLAVVGAHRPGPGRTEFDDLLRQLNDNLTQIRDMMMDARNKGRRHAGMEPEPVELAPVLDSVQASVGLRFP
DVDIQVEVEQPSPPLRALMRGGAPTLRRVVENLVLNACEGNGEEGAARVHIHARVEPLSGRLEVTITDDGPGFPPGQLSR
PAEALYTSKSHATGLGLYTSECLLRASGGMLHRRNATGGGAVLRMVLPREYR

Sequences:

>Translated_452_residues
MSPRSAGRQALLSSFRRWTRAQDAAEVLAASGLGAWLALCAFVPSLLAMTAWAPGARSFFGIHFGTALLCAAPMLTSGVL
FSLVHRRRRRIEPWGWGWLIFGVATMHFFVAALMALSAPPGAAVIASLFLFTTAFHGRLHRVTPRQPFLALGTALALALA
LPLRGSDEHLALFGVIGPAALTAQLYLGTFAVQHDRARADAERLRAAVHAQLLEQQERDVGRLSQALSEILGYHHDIDNA
LMAAGSAADMLAVVGAHRPGPGRTEFDDLLRQLNDNLTQIRDMMMDARNKGRRHAGMEPEPVELAPVLDSVQASVGLRFP
DVDIQVEVEQPSPPLRALMRGGAPTLRRVVENLVLNACEGNGEEGAARVHIHARVEPLSGRLEVTITDDGPGFPPGQLSR
PAEALYTSKSHATGLGLYTSECLLRASGGMLHRRNATGGGAVLRMVLPREYR
>Mature_451_residues
SPRSAGRQALLSSFRRWTRAQDAAEVLAASGLGAWLALCAFVPSLLAMTAWAPGARSFFGIHFGTALLCAAPMLTSGVLF
SLVHRRRRRIEPWGWGWLIFGVATMHFFVAALMALSAPPGAAVIASLFLFTTAFHGRLHRVTPRQPFLALGTALALALAL
PLRGSDEHLALFGVIGPAALTAQLYLGTFAVQHDRARADAERLRAAVHAQLLEQQERDVGRLSQALSEILGYHHDIDNAL
MAAGSAADMLAVVGAHRPGPGRTEFDDLLRQLNDNLTQIRDMMMDARNKGRRHAGMEPEPVELAPVLDSVQASVGLRFPD
VDIQVEVEQPSPPLRALMRGGAPTLRRVVENLVLNACEGNGEEGAARVHIHARVEPLSGRLEVTITDDGPGFPPGQLSRP
AEALYTSKSHATGLGLYTSECLLRASGGMLHRRNATGGGAVLRMVLPREYR

Specific function: Member Of The Two-Component Regulatory System Kdpd/Kdpe Involved In The Regulation Of The Kdp Operon. Kdpd May Function As A Membrane-Associated Protein Kinase That Phosphorylates Kdpe In Response To Environmental Signals. [C]

COG id: COG4191

COG function: function code T; Signal transduction histidine kinase regulating C4-dicarboxylate transport system

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.3.- [C]

Molecular weight: Translated: 48721; Mature: 48590

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPRSAGRQALLSSFRRWTRAQDAAEVLAASGLGAWLALCAFVPSLLAMTAWAPGARSFF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHH
GIHFGTALLCAAPMLTSGVLFSLVHRRRRRIEPWGWGWLIFGVATMHFFVAALMALSAPP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
GAAVIASLFLFTTAFHGRLHRVTPRQPFLALGTALALALALPLRGSDEHLALFGVIGPAA
HHHHHHHHHHHHHHHHCHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHH
LTAQLYLGTFAVQHDRARADAERLRAAVHAQLLEQQERDVGRLSQALSEILGYHHDIDNA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
LMAAGSAADMLAVVGAHRPGPGRTEFDDLLRQLNDNLTQIRDMMMDARNKGRRHAGMEPE
HHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCC
PVELAPVLDSVQASVGLRFPDVDIQVEVEQPSPPLRALMRGGAPTLRRVVENLVLNACEG
CCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCC
NGEEGAARVHIHARVEPLSGRLEVTITDDGPGFPPGQLSRPAEALYTSKSHATGLGLYTS
CCCCCCEEEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHH
ECLLRASGGMLHRRNATGGGAVLRMVLPREYR
HHHHHHCCCCEEECCCCCCHHHHHHHCCCCCC
>Mature Secondary Structure 
SPRSAGRQALLSSFRRWTRAQDAAEVLAASGLGAWLALCAFVPSLLAMTAWAPGARSFF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHH
GIHFGTALLCAAPMLTSGVLFSLVHRRRRRIEPWGWGWLIFGVATMHFFVAALMALSAPP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
GAAVIASLFLFTTAFHGRLHRVTPRQPFLALGTALALALALPLRGSDEHLALFGVIGPAA
HHHHHHHHHHHHHHHHCHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHH
LTAQLYLGTFAVQHDRARADAERLRAAVHAQLLEQQERDVGRLSQALSEILGYHHDIDNA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
LMAAGSAADMLAVVGAHRPGPGRTEFDDLLRQLNDNLTQIRDMMMDARNKGRRHAGMEPE
HHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCC
PVELAPVLDSVQASVGLRFPDVDIQVEVEQPSPPLRALMRGGAPTLRRVVENLVLNACEG
CCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCC
NGEEGAARVHIHARVEPLSGRLEVTITDDGPGFPPGQLSRPAEALYTSKSHATGLGLYTS
CCCCCCEEEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHH
ECLLRASGGMLHRRNATGGGAVLRMVLPREYR
HHHHHHCCCCEEECCCCCCHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Transferring phosphorus-containing groups [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA