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The map label for this gene is ycfD [C]

Identifier: 108757183

GI number: 108757183

Start: 173554

End: 174441

Strand: Reverse

Name: ycfD [C]

Synonym: MXAN_0143

Alternate gene names: 108757183

Gene position: 174441-173554 (Counterclockwise)

Preceding gene: 108757103

Following gene: 108758069

Centisome position: 1.91

GC content: 71.06

Gene sequence:

>888_bases
ATGCTGCTCGATGAACTGCTGAATGGCTTTCCGCGGGAGCGCTTCCTCCAGGAGCACTACCTGCGGCGTCCCTTCACCGG
CGCTTCCGCCGCGGAGCGCCTCCAGCGCCTGGGGACGTGGGAGACCATCGACTTCCTCGTCGAGGAGACGGCCTGCGACG
TGCTGCTCGCGCGCCAGGGCGTACCCTACCCGGGAGACAGGCCCACGACGGCGAAGGCGGCGCGGGAGCTGTTCGCGCAG
GGCTACACGCTCGCGCTGCGGCAGCCGGACCTGCACCACCCGGACCTGGCCCAACTGGCGCGCGCCTTCAGCGCGGAGCT
GCACGGCCGCATCAACCTGCACATCTACTGCACGCCCGCGGGGCACCACGGCTTCGGCTGGCACTGCGACCCGGAGGAGG
TGTTCATCCTCCAGACGGCGGGCCGCAAGGACTACCTGCTGCGGGAGAACACGCTCCACCCCGTACCCCTGCCGGAGTCC
GTACCCAGCGGCTCCCTGGCGGCGCAGGAGAAGACGCCCGTCGAGACGCACTCGCTGAGCGCCGGGGACTTCATCTACAT
CCCGGGCGGGCACTGGCACATGGCGCAGGCAACCGAGGAGGCGCTGTCCATCTCCATCGGCCTGATGCCGCCCACGCTCC
TGGACCTCCTCGACGGGGTGAGGGCCGCGCTGGCCAGCAGCCCGGTGTGGCGGCGGCGGATGCCCTCGCTGGGGCGTGCC
TCCTCACTGGACGACCCGAGCAAACTGGCGCTGCTGCGGACGCTGTTGTCGGAGCTGGGCGGTGAAGTCCAGCGCCAGCT
CGCCGACCCCGGCTACCCCCTGCGCTTCCTCGCGCAGACGGCCCGGTTCTATCTGCGCTCCACGGGAATCCGGGGCAACG
GGCGCTGA

Upstream 100 bases:

>100_bases
GGCCAAGGGGGAATGGCAGAGCTGCCTCGCCTCGCTGGTGCAGCTCCGGGCCGCGCACCCGGATGCGCAACTCGGAAGCG
CCTGAGCAGATTGAACGCCC

Downstream 100 bases:

>100_bases
CGGCGCGCGGCACCGCGAACCCCTTCACTGCGCGCTCTTCTATTGAGGGCGCTGGTGCTAAGAAGAGCAGCCACTGAGGA
GCGTGATGCCCGTACTCGCC

Product: cupin family protein

Products: NA

Alternate protein names: Cupin Superfamily Protein; Cupin Family Protein

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MLLDELLNGFPRERFLQEHYLRRPFTGASAAERLQRLGTWETIDFLVEETACDVLLARQGVPYPGDRPTTAKAARELFAQ
GYTLALRQPDLHHPDLAQLARAFSAELHGRINLHIYCTPAGHHGFGWHCDPEEVFILQTAGRKDYLLRENTLHPVPLPES
VPSGSLAAQEKTPVETHSLSAGDFIYIPGGHWHMAQATEEALSISIGLMPPTLLDLLDGVRAALASSPVWRRRMPSLGRA
SSLDDPSKLALLRTLLSELGGEVQRQLADPGYPLRFLAQTARFYLRSTGIRGNGR

Sequences:

>Translated_295_residues
MLLDELLNGFPRERFLQEHYLRRPFTGASAAERLQRLGTWETIDFLVEETACDVLLARQGVPYPGDRPTTAKAARELFAQ
GYTLALRQPDLHHPDLAQLARAFSAELHGRINLHIYCTPAGHHGFGWHCDPEEVFILQTAGRKDYLLRENTLHPVPLPES
VPSGSLAAQEKTPVETHSLSAGDFIYIPGGHWHMAQATEEALSISIGLMPPTLLDLLDGVRAALASSPVWRRRMPSLGRA
SSLDDPSKLALLRTLLSELGGEVQRQLADPGYPLRFLAQTARFYLRSTGIRGNGR
>Mature_295_residues
MLLDELLNGFPRERFLQEHYLRRPFTGASAAERLQRLGTWETIDFLVEETACDVLLARQGVPYPGDRPTTAKAARELFAQ
GYTLALRQPDLHHPDLAQLARAFSAELHGRINLHIYCTPAGHHGFGWHCDPEEVFILQTAGRKDYLLRENTLHPVPLPES
VPSGSLAAQEKTPVETHSLSAGDFIYIPGGHWHMAQATEEALSISIGLMPPTLLDLLDGVRAALASSPVWRRRMPSLGRA
SSLDDPSKLALLRTLLSELGGEVQRQLADPGYPLRFLAQTARFYLRSTGIRGNGR

Specific function: Unknown

COG id: COG2850

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32739; Mature: 32739

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLDELLNGFPRERFLQEHYLRRPFTGASAAERLQRLGTWETIDFLVEETACDVLLARQG
CCHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
VPYPGDRPTTAKAARELFAQGYTLALRQPDLHHPDLAQLARAFSAELHGRINLHIYCTPA
CCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHCCEEEEEEEEEEC
GHHGFGWHCDPEEVFILQTAGRKDYLLRENTLHPVPLPESVPSGSLAAQEKTPVETHSLS
CCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCC
AGDFIYIPGGHWHMAQATEEALSISIGLMPPTLLDLLDGVRAALASSPVWRRRMPSLGRA
CCCEEEECCCCEEHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCCC
SSLDDPSKLALLRTLLSELGGEVQRQLADPGYPLRFLAQTARFYLRSTGIRGNGR
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLLDELLNGFPRERFLQEHYLRRPFTGASAAERLQRLGTWETIDFLVEETACDVLLARQG
CCHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
VPYPGDRPTTAKAARELFAQGYTLALRQPDLHHPDLAQLARAFSAELHGRINLHIYCTPA
CCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHCCEEEEEEEEEEC
GHHGFGWHCDPEEVFILQTAGRKDYLLRENTLHPVPLPESVPSGSLAAQEKTPVETHSLS
CCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCC
AGDFIYIPGGHWHMAQATEEALSISIGLMPPTLLDLLDGVRAALASSPVWRRRMPSLGRA
CCCEEEECCCCEEHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCCC
SSLDDPSKLALLRTLLSELGGEVQRQLADPGYPLRFLAQTARFYLRSTGIRGNGR
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA