| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is blh [H]
Identifier: 108757180
GI number: 108757180
Start: 5317585
End: 5318286
Strand: Direct
Name: blh [H]
Synonym: MXAN_4319
Alternate gene names: 108757180
Gene position: 5317585-5318286 (Clockwise)
Preceding gene: 108757111
Following gene: 108757932
Centisome position: 58.18
GC content: 68.23
Gene sequence:
>702_bases ATGATTTTCCGGCAGCTTTTCGATTCCGAGTCCTCGACGTACACGTACCTCATCGGCGACGAGGCCACGCGCCAGGCCGT CCTCATCGACCCCGTGCTGGAGCAGGTCGACCGCGACCTGCAAATGGTGGCCGAGCTGGACCTCACCCTCACCCACGTCT TCGACACCCACGTCCACGCCGACCACATCACCGCATCGGGCGCGCTGCGGGAGCGCACGCAGGCCACGGTGGTGGGGAGC GTGAACGGCGCCAGTTGCGCCAACGTCCAGGTCCGCCACGGGGACGAGGTGCGCGTCGGGCAGCTCGTCTTCCAGGTGCT CGCCACCCCGGGGCACACGGACGACAGCATCAGCTACCTGCTCGGCGACCGCGTCTTCACCGGGGATGCGCTGCTCGTGC GCGGCAACGGCCGCACCGACTTCCAGAACGGGAACGCGAGCCAGCTCTACGACAGCCTCACGCGCGTCCTCTTCACCCTC CCCGATGAGACGCTCGTCTACCCCGGCCACGACTACAAGGGCCGCACGGTGACGAGCATCGCCGAGGAGAAGCGGCACAA CCCTCGCGTGGCCGGCAAGAGCCGGGAGGAGTTCATCCACATCATGGAGAACCTCAACCTGCCCAGGCCCAAGCTGATTG ACGCCGCCGTCCCGGCCAACCGCGCCTGTGGGCACACGGCGCCCTCACCCCAGGGGGCCTGA
Upstream 100 bases:
>100_bases CAGGCTCCAAAGAAAGGATTCAGCAGGGCCTGAGAATGGATTCAGCAGGGCCTGAATCCTTCTTCCACGCCCCGGCCTCT CATGGACAGGAGGCTTCGAC
Downstream 100 bases:
>100_bases GTCCCCTGGCCACTTCGCAGGAGTCCCGACCATGACACTCCGCCCCTATCAGGACATCACGCCCTCGCAGCTCGACACGC TCGGCCCCGAGGTGCGGCGC
Product: metallo-beta-lactamase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 233; Mature: 233
Protein sequence:
>233_residues MIFRQLFDSESSTYTYLIGDEATRQAVLIDPVLEQVDRDLQMVAELDLTLTHVFDTHVHADHITASGALRERTQATVVGS VNGASCANVQVRHGDEVRVGQLVFQVLATPGHTDDSISYLLGDRVFTGDALLVRGNGRTDFQNGNASQLYDSLTRVLFTL PDETLVYPGHDYKGRTVTSIAEEKRHNPRVAGKSREEFIHIMENLNLPRPKLIDAAVPANRACGHTAPSPQGA
Sequences:
>Translated_233_residues MIFRQLFDSESSTYTYLIGDEATRQAVLIDPVLEQVDRDLQMVAELDLTLTHVFDTHVHADHITASGALRERTQATVVGS VNGASCANVQVRHGDEVRVGQLVFQVLATPGHTDDSISYLLGDRVFTGDALLVRGNGRTDFQNGNASQLYDSLTRVLFTL PDETLVYPGHDYKGRTVTSIAEEKRHNPRVAGKSREEFIHIMENLNLPRPKLIDAAVPANRACGHTAPSPQGA >Mature_233_residues MIFRQLFDSESSTYTYLIGDEATRQAVLIDPVLEQVDRDLQMVAELDLTLTHVFDTHVHADHITASGALRERTQATVVGS VNGASCANVQVRHGDEVRVGQLVFQVLATPGHTDDSISYLLGDRVFTGDALLVRGNGRTDFQNGNASQLYDSLTRVLFTL PDETLVYPGHDYKGRTVTSIAEEKRHNPRVAGKSREEFIHIMENLNLPRPKLIDAAVPANRACGHTAPSPQGA
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-B beta-lactamase family [H]
Homologues:
Organism=Homo sapiens, GI41327741, Length=233, Percent_Identity=48.9270386266094, Blast_Score=230, Evalue=1e-60, Organism=Homo sapiens, GI46361987, Length=167, Percent_Identity=37.125748502994, Blast_Score=91, Evalue=8e-19, Organism=Homo sapiens, GI14150041, Length=167, Percent_Identity=37.125748502994, Blast_Score=90, Evalue=1e-18, Organism=Homo sapiens, GI94538320, Length=176, Percent_Identity=31.8181818181818, Blast_Score=84, Evalue=8e-17, Organism=Homo sapiens, GI94538322, Length=214, Percent_Identity=29.4392523364486, Blast_Score=84, Evalue=8e-17, Organism=Homo sapiens, GI116642887, Length=172, Percent_Identity=38.3720930232558, Blast_Score=82, Evalue=5e-16, Organism=Homo sapiens, GI21703352, Length=172, Percent_Identity=38.3720930232558, Blast_Score=81, Evalue=8e-16, Organism=Escherichia coli, GI1786406, Length=161, Percent_Identity=35.4037267080745, Blast_Score=64, Evalue=8e-12, Organism=Caenorhabditis elegans, GI17538952, Length=227, Percent_Identity=47.136563876652, Blast_Score=204, Evalue=4e-53, Organism=Caenorhabditis elegans, GI17536925, Length=183, Percent_Identity=30.0546448087432, Blast_Score=81, Evalue=4e-16, Organism=Saccharomyces cerevisiae, GI6320478, Length=201, Percent_Identity=27.8606965174129, Blast_Score=70, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6324614, Length=190, Percent_Identity=28.4210526315789, Blast_Score=67, Evalue=3e-12, Organism=Drosophila melanogaster, GI221330176, Length=227, Percent_Identity=52.863436123348, Blast_Score=243, Evalue=8e-65, Organism=Drosophila melanogaster, GI24667703, Length=168, Percent_Identity=35.1190476190476, Blast_Score=88, Evalue=4e-18, Organism=Drosophila melanogaster, GI24667711, Length=168, Percent_Identity=35.1190476190476, Blast_Score=88, Evalue=4e-18, Organism=Drosophila melanogaster, GI21356335, Length=168, Percent_Identity=35.1190476190476, Blast_Score=88, Evalue=5e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005939 - InterPro: IPR001279 [H]
Pfam domain/function: PF04273 DUF442; PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 25589; Mature: 25589
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFRQLFDSESSTYTYLIGDEATRQAVLIDPVLEQVDRDLQMVAELDLTLTHVFDTHVHA CCHHHHHCCCCCEEEEEECCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHEEHHHCCCCC DHITASGALRERTQATVVGSVNGASCANVQVRHGDEVRVGQLVFQVLATPGHTDDSISYL CCEECCCHHHHCCCEEEEECCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHH LGDRVFTGDALLVRGNGRTDFQNGNASQLYDSLTRVLFTLPDETLVYPGHDYKGRTVTSI HCCEEEECCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHH AEEKRHNPRVAGKSREEFIHIMENLNLPRPKLIDAAVPANRACGHTAPSPQGA HHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MIFRQLFDSESSTYTYLIGDEATRQAVLIDPVLEQVDRDLQMVAELDLTLTHVFDTHVHA CCHHHHHCCCCCEEEEEECCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHEEHHHCCCCC DHITASGALRERTQATVVGSVNGASCANVQVRHGDEVRVGQLVFQVLATPGHTDDSISYL CCEECCCHHHHCCCEEEEECCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHH LGDRVFTGDALLVRGNGRTDFQNGNASQLYDSLTRVLFTLPDETLVYPGHDYKGRTVTSI HCCEEEECCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHH AEEKRHNPRVAGKSREEFIHIMENLNLPRPKLIDAAVPANRACGHTAPSPQGA HHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]