| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108757143
Identifier: 108757143
GI number: 108757143
Start: 5590872
End: 5593619
Strand: Reverse
Name: 108757143
Synonym: MXAN_4513
Alternate gene names: NA
Gene position: 5593619-5590872 (Counterclockwise)
Preceding gene: 108760954
Following gene: 108761212
Centisome position: 61.2
GC content: 66.12
Gene sequence:
>2748_bases ATGATTTTGCGCAGGCTTTGCGTCCAGCACTTTCGCTGCTTCCGGAGCCCGGTGGACCTGCAAGGGCTGGGAACGGGCAT CCATGTCATCCATGCGCCCAATGAGACGGGTAAGTCGAGCCTCATCCTGGCCGTCGCAAGGGCGCTGTTCGACCGCCACT CCACGAAGGACCGAGAGATGAACCTGCTTCGTCCCTGGCAGACCAAGCTCTCTCCGCGAGTGAAGCTGGAGTTCGAGACG GGGGGGAAGCGCTACCGGCTTGAGAAGGCTTTCCTGGACGACGCCAGTAGCGTCCTGGATGAGTGGACGGGGAGTCGGTT CGAGCGGCTCGCTGAATCGCAGGAGGCGGATGCGTTGCTCCGAGGCTTCCTTGTCTCCAGCGTGCCCGGCAACGGCGTGA CGAAGGTGGGCAACTGGGGCTTGGCTCGGTTGCTCTGGTTGAATCAGTCGGAAGAGCGGTACGACCTGCCCGGCCTCGAT ACACCGCTCAAGGCCCGCCTCCTTGAGACGGTTGGAGTCGCCGCCCTGAGCAACGAGGAACAGTCCCTCCTGAAGGCAAT GGAGGGGGCCTACCGCCAGTTCTTCACGCCCAAGACGGGAAAGCTCGTCACCGGAAGCGACCTCGATCGTGAGGGTGCTC GCATGCGGGAGTTGCGCGAGGAGGCAGCTCGGTTGACTCAGCGGTTGGCGGAGATCGAGCAGCTTGCCAGCGAGAGCATG GACCTCGGCCAGAAGCAGCTCTCCCTGGCGGAGGAACGGAGGACCTATGAGCAGCGGCTCGCTAGCTTGCAGGAGCGCAT CGCGGAGGAGGAGAAGCTGGAGCAGCAGGCGGCGCTCCGGGAGAAGGACGTCGAGCGTCAGCGAAAAGAGTGGCAGGCGC TGGACCAGAAGCAGCGAGAGCTTCTCGCGCTCCAGCAGAAGGTGGTCCAGCAGGAGGACCTGCTGGCTCGCAACGAGCCG GCCTTGCAGGAGGCCCAGGGACTCGTCCGGCGCGCCGAAGACGGGGCTCGCGAAGCACGCGAGCGACACAAGGCTCAGCA GGGGGAGGTGGAGCTGGCGGAGCAGCGCGTGGAACGAGGACGACTCCTCGAAGATGCGCGCGCTTCCCTGGCGGAGCAGC GGAAGTTGGACGGGCTCGTCAAGCAGGGGACGCGGGTGGAGACCGCAGTGGAGAATGCCCGACGCAAGACTGCGGCGCTG AAGGCGCTTCCAGACGCAGAGGTAAAGCGCGCCGAGGAGGTGCAGCGCAAGCTGAATCAGGCCCTGGACAGGCTGGACGC ACAGGGGGTCGAGGTCTCCTTCACTGCCGAGAGCCCGCAGCGTATCGAGTGGGAGGCCCAGGGTCACACCACACCGCACA AGCTCACAAGGGAGGAGCAGAAGGTCTTCTCGGGGGTGCGTGCTGGTGCACTGCGCATCAAGGGAGTGGGTGAAGTCCGC GTGCGCACTGCGGCCGAGGAGATTGGCAAGCTCGAAGCGGAGGTCGAGAAGCACCGGAAGGACCTGGCGCGCCGCCTCCA TGAGCACGGAGTCGATGATGTGGTGGGTCTGCGCGCGGAGTGGGCGTCCCAGCAGGTCGTGCTTCAGGAGCTGTCGAAGT ACGAGGAGGCACGGAGCCAGTTCTTGGAGGACAACAAAGTCGAGAGCGTCGAGGTGCTCAAGGAACAGCAGCGTGAGCAG GCACGGAAGACGGGGGCACTGAGCGCCCAGCTCAACCTTTCGCGGGAGGAGCTACAGACCCACCCATTTCCCGAGCTGAA GGCGCTGACGGAGGAACTCAAGGCCCGCAGGCAGGAGGTGAAGGCCCGGGACAAGGCGCGGGAGGAGGTGGAAGGAGCTC TCCGGAAGGCAGAGCAGCACCTCAAGGTCGTCACTCAGGGGCGCAGCTCCGCGCAGGCTGCGGCCCAGGCGCTGGGCTTG GAGCTGAAGACCCAGCTCAACACCCTGGGCTTGTCCCTCGAAGGGCTGGGCGCGGAGGTAGAGCGGGCGGAGGCGGAGCT GAGCCGTCTGGAGAACATGGTCAGGGGGCTCCGAGCGCAACTTCCCAGGCTGGAAGCACGCGCCACGGTCGAGCGTAAGA AGCTGCAGGACACGTTGGAGCGGATCGGAGACGAGGAGAAGAAGAACCAGGAGAAGCGCATCCGGGCGCAGGCGCTGCTG GAGCAGGCGGCAGCGGACGGTCTGTACTCGCGGCTCTGCGAGGCGGAGGAGAAGCTGGCCCTGGCGGAAGCCGCGTACCA GCGACTGGAGACACGGGCCCGGGCCGCGGAGAGCCTCCGCACGATGTCCCAGGCCTGGCAGGACCAAGTGAACCAGACGT TCCTGGCGCCCATCGAGCAGGAGCTCCACTCCCGCCTTGCGTATATCCGTGGAGGAGGGCGGCTCGAGCAACTCTTGCTG GACGCAGAGTTCAGCGAGGCACGGTTGCAGACGGCGGGGGGCCCCTGGCCGCTGGAGGGCTTTTCGTGGGGGATGCGGGA GCAGACCCTGTTCGCTTTGAGGCTGGCGCTCGGGGAGCTGCTGGCCAAGAAAGGGCCGCGGCCGGAGCCACAGCTCGTCG TCCTCGACGACGCACTGGTGAACACGGACGCGGCCCGGCACCAGCGCGCCCTGGAGGTCATCGAGAGCGCGGGGGACACG TTGCAGATTCTCATCCTCACGGCCTTCCCGGAGCGCTACCGGACTCTCCGGGGAGTGAAGGAGTTCGACCTGAGGGCCCT GGCTCAGGCGTCCTCGCCGTCTTCTTGA
Upstream 100 bases:
>100_bases GGCTGAACAAACCGGCCGCAGTTGGACCAGGTGCCACGCCGGAGCCCGTCAGGACCGCGGCCAGACAGTTGCTGTCAGAG CTGGTGATGGAGGTGTGGAA
Downstream 100 bases:
>100_bases CCCGAAAGCAAGTCATTCAACCCCTCGCGCCCGTGCTGACCTGTAGCTAATCGAAGGCACGCGCAGCCAGCTCCTTCGCC ATCTCGACGAAGATGCGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: SMC Domain Protein; RecF/RecN/SMC N Terminal Domain-Containing Protein; ATPase Involved In DNA Repair-Like Protein; DNA Repair ATPase-Like Protein
Number of amino acids: Translated: 915; Mature: 915
Protein sequence:
>915_residues MILRRLCVQHFRCFRSPVDLQGLGTGIHVIHAPNETGKSSLILAVARALFDRHSTKDREMNLLRPWQTKLSPRVKLEFET GGKRYRLEKAFLDDASSVLDEWTGSRFERLAESQEADALLRGFLVSSVPGNGVTKVGNWGLARLLWLNQSEERYDLPGLD TPLKARLLETVGVAALSNEEQSLLKAMEGAYRQFFTPKTGKLVTGSDLDREGARMRELREEAARLTQRLAEIEQLASESM DLGQKQLSLAEERRTYEQRLASLQERIAEEEKLEQQAALREKDVERQRKEWQALDQKQRELLALQQKVVQQEDLLARNEP ALQEAQGLVRRAEDGAREARERHKAQQGEVELAEQRVERGRLLEDARASLAEQRKLDGLVKQGTRVETAVENARRKTAAL KALPDAEVKRAEEVQRKLNQALDRLDAQGVEVSFTAESPQRIEWEAQGHTTPHKLTREEQKVFSGVRAGALRIKGVGEVR VRTAAEEIGKLEAEVEKHRKDLARRLHEHGVDDVVGLRAEWASQQVVLQELSKYEEARSQFLEDNKVESVEVLKEQQREQ ARKTGALSAQLNLSREELQTHPFPELKALTEELKARRQEVKARDKAREEVEGALRKAEQHLKVVTQGRSSAQAAAQALGL ELKTQLNTLGLSLEGLGAEVERAEAELSRLENMVRGLRAQLPRLEARATVERKKLQDTLERIGDEEKKNQEKRIRAQALL EQAAADGLYSRLCEAEEKLALAEAAYQRLETRARAAESLRTMSQAWQDQVNQTFLAPIEQELHSRLAYIRGGGRLEQLLL DAEFSEARLQTAGGPWPLEGFSWGMREQTLFALRLALGELLAKKGPRPEPQLVVLDDALVNTDAARHQRALEVIESAGDT LQILILTAFPERYRTLRGVKEFDLRALAQASSPSS
Sequences:
>Translated_915_residues MILRRLCVQHFRCFRSPVDLQGLGTGIHVIHAPNETGKSSLILAVARALFDRHSTKDREMNLLRPWQTKLSPRVKLEFET GGKRYRLEKAFLDDASSVLDEWTGSRFERLAESQEADALLRGFLVSSVPGNGVTKVGNWGLARLLWLNQSEERYDLPGLD TPLKARLLETVGVAALSNEEQSLLKAMEGAYRQFFTPKTGKLVTGSDLDREGARMRELREEAARLTQRLAEIEQLASESM DLGQKQLSLAEERRTYEQRLASLQERIAEEEKLEQQAALREKDVERQRKEWQALDQKQRELLALQQKVVQQEDLLARNEP ALQEAQGLVRRAEDGAREARERHKAQQGEVELAEQRVERGRLLEDARASLAEQRKLDGLVKQGTRVETAVENARRKTAAL KALPDAEVKRAEEVQRKLNQALDRLDAQGVEVSFTAESPQRIEWEAQGHTTPHKLTREEQKVFSGVRAGALRIKGVGEVR VRTAAEEIGKLEAEVEKHRKDLARRLHEHGVDDVVGLRAEWASQQVVLQELSKYEEARSQFLEDNKVESVEVLKEQQREQ ARKTGALSAQLNLSREELQTHPFPELKALTEELKARRQEVKARDKAREEVEGALRKAEQHLKVVTQGRSSAQAAAQALGL ELKTQLNTLGLSLEGLGAEVERAEAELSRLENMVRGLRAQLPRLEARATVERKKLQDTLERIGDEEKKNQEKRIRAQALL EQAAADGLYSRLCEAEEKLALAEAAYQRLETRARAAESLRTMSQAWQDQVNQTFLAPIEQELHSRLAYIRGGGRLEQLLL DAEFSEARLQTAGGPWPLEGFSWGMREQTLFALRLALGELLAKKGPRPEPQLVVLDDALVNTDAARHQRALEVIESAGDT LQILILTAFPERYRTLRGVKEFDLRALAQASSPSS >Mature_915_residues MILRRLCVQHFRCFRSPVDLQGLGTGIHVIHAPNETGKSSLILAVARALFDRHSTKDREMNLLRPWQTKLSPRVKLEFET GGKRYRLEKAFLDDASSVLDEWTGSRFERLAESQEADALLRGFLVSSVPGNGVTKVGNWGLARLLWLNQSEERYDLPGLD TPLKARLLETVGVAALSNEEQSLLKAMEGAYRQFFTPKTGKLVTGSDLDREGARMRELREEAARLTQRLAEIEQLASESM DLGQKQLSLAEERRTYEQRLASLQERIAEEEKLEQQAALREKDVERQRKEWQALDQKQRELLALQQKVVQQEDLLARNEP ALQEAQGLVRRAEDGAREARERHKAQQGEVELAEQRVERGRLLEDARASLAEQRKLDGLVKQGTRVETAVENARRKTAAL KALPDAEVKRAEEVQRKLNQALDRLDAQGVEVSFTAESPQRIEWEAQGHTTPHKLTREEQKVFSGVRAGALRIKGVGEVR VRTAAEEIGKLEAEVEKHRKDLARRLHEHGVDDVVGLRAEWASQQVVLQELSKYEEARSQFLEDNKVESVEVLKEQQREQ ARKTGALSAQLNLSREELQTHPFPELKALTEELKARRQEVKARDKAREEVEGALRKAEQHLKVVTQGRSSAQAAAQALGL ELKTQLNTLGLSLEGLGAEVERAEAELSRLENMVRGLRAQLPRLEARATVERKKLQDTLERIGDEEKKNQEKRIRAQALL EQAAADGLYSRLCEAEEKLALAEAAYQRLETRARAAESLRTMSQAWQDQVNQTFLAPIEQELHSRLAYIRGGGRLEQLLL DAEFSEARLQTAGGPWPLEGFSWGMREQTLFALRLALGELLAKKGPRPEPQLVVLDDALVNTDAARHQRALEVIESAGDT LQILILTAFPERYRTLRGVKEFDLRALAQASSPSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 103327; Mature: 103327
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILRRLCVQHFRCFRSPVDLQGLGTGIHVIHAPNETGKSSLILAVARALFDRHSTKDREM CHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCHHC NLLRPWQTKLSPRVKLEFETGGKRYRLEKAFLDDASSVLDEWTGSRFERLAESQEADALL CCCCCHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH RGFLVSSVPGNGVTKVGNWGLARLLWLNQSEERYDLPGLDTPLKARLLETVGVAALSNEE HHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHH QSLLKAMEGAYRQFFTPKTGKLVTGSDLDREGARMRELREEAARLTQRLAEIEQLASESM HHHHHHHHHHHHHHCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLGQKQLSLAEERRTYEQRLASLQERIAEEEKLEQQAALREKDVERQRKEWQALDQKQRE HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLALQQKVVQQEDLLARNEPALQEAQGLVRRAEDGAREARERHKAQQGEVELAEQRVERG HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH RLLEDARASLAEQRKLDGLVKQGTRVETAVENARRKTAALKALPDAEVKRAEEVQRKLNQ HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH ALDRLDAQGVEVSFTAESPQRIEWEAQGHTTPHKLTREEQKVFSGVRAGALRIKGVGEVR HHHHHCCCCCEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCHHH VRTAAEEIGKLEAEVEKHRKDLARRLHEHGVDDVVGLRAEWASQQVVLQELSKYEEARSQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLEDNKVESVEVLKEQQREQARKTGALSAQLNLSREELQTHPFPELKALTEELKARRQEV HHCCCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHH KARDKAREEVEGALRKAEQHLKVVTQGRSSAQAAAQALGLELKTQLNTLGLSLEGLGAEV HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCHH ERAEAELSRLENMVRGLRAQLPRLEARATVERKKLQDTLERIGDEEKKNQEKRIRAQALL HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH EQAAADGLYSRLCEAEEKLALAEAAYQRLETRARAAESLRTMSQAWQDQVNQTFLAPIEQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELHSRLAYIRGGGRLEQLLLDAEFSEARLQTAGGPWPLEGFSWGMREQTLFALRLALGEL HHHHHHHHHCCCCHHHHHHHHCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH LAKKGPRPEPQLVVLDDALVNTDAARHQRALEVIESAGDTLQILILTAFPERYRTLRGVK HHCCCCCCCCCEEEECCHHHCCHHHHHHHHHHHHHCCCCEEEEHEEHHCHHHHHHHHCHH EFDLRALAQASSPSS HHHHHHHHHCCCCCC >Mature Secondary Structure MILRRLCVQHFRCFRSPVDLQGLGTGIHVIHAPNETGKSSLILAVARALFDRHSTKDREM CHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCHHC NLLRPWQTKLSPRVKLEFETGGKRYRLEKAFLDDASSVLDEWTGSRFERLAESQEADALL CCCCCHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH RGFLVSSVPGNGVTKVGNWGLARLLWLNQSEERYDLPGLDTPLKARLLETVGVAALSNEE HHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHH QSLLKAMEGAYRQFFTPKTGKLVTGSDLDREGARMRELREEAARLTQRLAEIEQLASESM HHHHHHHHHHHHHHCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLGQKQLSLAEERRTYEQRLASLQERIAEEEKLEQQAALREKDVERQRKEWQALDQKQRE HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLALQQKVVQQEDLLARNEPALQEAQGLVRRAEDGAREARERHKAQQGEVELAEQRVERG HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH RLLEDARASLAEQRKLDGLVKQGTRVETAVENARRKTAALKALPDAEVKRAEEVQRKLNQ HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH ALDRLDAQGVEVSFTAESPQRIEWEAQGHTTPHKLTREEQKVFSGVRAGALRIKGVGEVR HHHHHCCCCCEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCHHH VRTAAEEIGKLEAEVEKHRKDLARRLHEHGVDDVVGLRAEWASQQVVLQELSKYEEARSQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLEDNKVESVEVLKEQQREQARKTGALSAQLNLSREELQTHPFPELKALTEELKARRQEV HHCCCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHH KARDKAREEVEGALRKAEQHLKVVTQGRSSAQAAAQALGLELKTQLNTLGLSLEGLGAEV HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCHH ERAEAELSRLENMVRGLRAQLPRLEARATVERKKLQDTLERIGDEEKKNQEKRIRAQALL HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH EQAAADGLYSRLCEAEEKLALAEAAYQRLETRARAAESLRTMSQAWQDQVNQTFLAPIEQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELHSRLAYIRGGGRLEQLLLDAEFSEARLQTAGGPWPLEGFSWGMREQTLFALRLALGEL HHHHHHHHHCCCCHHHHHHHHCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH LAKKGPRPEPQLVVLDDALVNTDAARHQRALEVIESAGDTLQILILTAFPERYRTLRGVK HHCCCCCCCCCEEEECCHHHCCHHHHHHHHHHHHHCCCCEEEEHEEHHCHHHHHHHHCHH EFDLRALAQASSPSS HHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA