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The map label for this gene is ybbE [H]

Identifier: 108757137

GI number: 108757137

Start: 2241220

End: 2242401

Strand: Direct

Name: ybbE [H]

Synonym: MXAN_1911

Alternate gene names: 108757137

Gene position: 2241220-2242401 (Clockwise)

Preceding gene: 108760434

Following gene: 108758004

Centisome position: 24.52

GC content: 72.59

Gene sequence:

>1182_bases
ATGAGTGGCGGTACCCACCCCATCGCGATTCTGCAGAAGGTCCTCGATGACGCCTGTGAATTGGGCGTCTTCCCCTCGGC
CCAGGCCGTCGTGCTGCACCGGGGCGCCCAGGTGTTCGGCGGCGTCGCGGGCAAGGTCTCCGGCGACACGCGCTTCGACC
TGGCGTCGCTCACCAAGGTCATCAGCACCACCTCCCTCTTCCTCCGCCTCTGGACGGAAGGGAAGGTGGGGCCGGAGACG
CTGGTGTCCCGCTACTTCCCGGGCACGCCCGTGGGCGATGCGGGCGTCACCGTGGCGGACCTGCTCTACCACCGCTCCGG
CCTGCCGCCCTTCGTGCCCTTCTTCGCGCAGGCGCTCACCGCGCACCCCGAGCTGCTGGACGCGGACTGTCCCTCCGCCC
TGCGCGCACGCGTCCGCGACGAGGTCATCCAGGCCGCCGCCGCCACGCCGCTCGCCGCCGAGCCCCAGACGCTCGCCGCC
TACAGCGACGTGGGCTTCATCCTCCTGGGCGAAATCCTCTCGCGGGCCGCGGGCGCTCCGCTGGACACGCTCTTCTCCCG
CCACGTCGCCGAGCCCCTGGGCCTCAGCGCCCGCTTCCACCGCCTCACCGACTTCCCCGCGGACGCCATGCCCGCGCCCA
CCGGCGCCACCCGCCCGCGCGAGCCCGCTCCGGGGCAGGAGACGCTGTGGAAGGACGTGCCCACCCAGCCCACGCGCCTG
GGGGAAGTGGACGACGACAACGCCTGGGTGATGGACGGCGTCGCCGGTCACGCGGGCCTCTTCGGCACCGCCGTGGACGT
GGCCCGCTTCGGCCAGGCCGTGCTGGACGGCTGCGCGGGTGGGGCCATCATCGCGCCGGGGCCGCTGTGGCACCGGGCGC
TGGCCACGGACCCGAAGGTGCAGGCCAGCACCCGCTCCATGGGCTTCGATTCGCCCTCCGAGGGCGTGTCCAGCGCCGGG
CACTACATTGGCGACACCCCGCCGGGCGCGGTGGGGCACCTGGGCTTCACCGGCACCAGCCTCTGGGTGGACCTGCGCCG
CTCGCTGGTGGTGGCGCTGGTGACGAACCGCGTGGCCAACGGCCGCCAGGAAACGCGCATCCGGGATTTCCGACCGCTCT
TCCATGACTTCGTCGTGGAGGCGCTCGAGCTCACTGAAACGAAGCAGGGACACCATGGCTGA

Upstream 100 bases:

>100_bases
TCGGCCACGGTGACATCAACTACCCCGTGGCGCTCGGCACCCAGGTCCGCCTGGACGCGGACGCCGCGCGCCTCACCTTC
CTCGAAGGAGCCGTGCGGGC

Downstream 100 bases:

>100_bases
CGACAACGGAAACGTCCTCGACACCCTCGAACTCGGCAGCGTGCGCCGCATCCACCTGGTGGGCGTGGCGGGCACGGGCA
TGGGCTCCTTCGCCGGCATG

Product: beta-lactamase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 393; Mature: 392

Protein sequence:

>393_residues
MSGGTHPIAILQKVLDDACELGVFPSAQAVVLHRGAQVFGGVAGKVSGDTRFDLASLTKVISTTSLFLRLWTEGKVGPET
LVSRYFPGTPVGDAGVTVADLLYHRSGLPPFVPFFAQALTAHPELLDADCPSALRARVRDEVIQAAAATPLAAEPQTLAA
YSDVGFILLGEILSRAAGAPLDTLFSRHVAEPLGLSARFHRLTDFPADAMPAPTGATRPREPAPGQETLWKDVPTQPTRL
GEVDDDNAWVMDGVAGHAGLFGTAVDVARFGQAVLDGCAGGAIIAPGPLWHRALATDPKVQASTRSMGFDSPSEGVSSAG
HYIGDTPPGAVGHLGFTGTSLWVDLRRSLVVALVTNRVANGRQETRIRDFRPLFHDFVVEALELTETKQGHHG

Sequences:

>Translated_393_residues
MSGGTHPIAILQKVLDDACELGVFPSAQAVVLHRGAQVFGGVAGKVSGDTRFDLASLTKVISTTSLFLRLWTEGKVGPET
LVSRYFPGTPVGDAGVTVADLLYHRSGLPPFVPFFAQALTAHPELLDADCPSALRARVRDEVIQAAAATPLAAEPQTLAA
YSDVGFILLGEILSRAAGAPLDTLFSRHVAEPLGLSARFHRLTDFPADAMPAPTGATRPREPAPGQETLWKDVPTQPTRL
GEVDDDNAWVMDGVAGHAGLFGTAVDVARFGQAVLDGCAGGAIIAPGPLWHRALATDPKVQASTRSMGFDSPSEGVSSAG
HYIGDTPPGAVGHLGFTGTSLWVDLRRSLVVALVTNRVANGRQETRIRDFRPLFHDFVVEALELTETKQGHHG
>Mature_392_residues
SGGTHPIAILQKVLDDACELGVFPSAQAVVLHRGAQVFGGVAGKVSGDTRFDLASLTKVISTTSLFLRLWTEGKVGPETL
VSRYFPGTPVGDAGVTVADLLYHRSGLPPFVPFFAQALTAHPELLDADCPSALRARVRDEVIQAAAATPLAAEPQTLAAY
SDVGFILLGEILSRAAGAPLDTLFSRHVAEPLGLSARFHRLTDFPADAMPAPTGATRPREPAPGQETLWKDVPTQPTRLG
EVDDDNAWVMDGVAGHAGLFGTAVDVARFGQAVLDGCAGGAIIAPGPLWHRALATDPKVQASTRSMGFDSPSEGVSSAGH
YIGDTPPGAVGHLGFTGTSLWVDLRRSLVVALVTNRVANGRQETRIRDFRPLFHDFVVEALELTETKQGHHG

Specific function: Unknown

COG id: COG1680

COG function: function code V; Beta-lactamase class C and other penicillin binding proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0214 family [H]

Homologues:

Organism=Escherichia coli, GI87082101, Length=329, Percent_Identity=28.2674772036474, Blast_Score=112, Evalue=3e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012338
- InterPro:   IPR001466
- InterPro:   IPR022849 [H]

Pfam domain/function: PF00144 Beta-lactamase [H]

EC number: NA

Molecular weight: Translated: 41466; Mature: 41335

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGGTHPIAILQKVLDDACELGVFPSAQAVVLHRGAQVFGGVAGKVSGDTRFDLASLTKV
CCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHCCCCCCCCCCCHHHHHHHHHH
ISTTSLFLRLWTEGKVGPETLVSRYFPGTPVGDAGVTVADLLYHRSGLPPFVPFFAQALT
HHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHH
AHPELLDADCPSALRARVRDEVIQAAAATPLAAEPQTLAAYSDVGFILLGEILSRAAGAP
CCCHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCC
LDTLFSRHVAEPLGLSARFHRLTDFPADAMPAPTGATRPREPAPGQETLWKDVPTQPTRL
HHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCC
GEVDDDNAWVMDGVAGHAGLFGTAVDVARFGQAVLDGCAGGAIIAPGPLWHRALATDPKV
CCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHCCCCCC
QASTRSMGFDSPSEGVSSAGHYIGDTPPGAVGHLGFTGTSLWVDLRRSLVVALVTNRVAN
CHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
GRQETRIRDFRPLFHDFVVEALELTETKQGHHG
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SGGTHPIAILQKVLDDACELGVFPSAQAVVLHRGAQVFGGVAGKVSGDTRFDLASLTKV
CCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHCCCCCCCCCCCHHHHHHHHHH
ISTTSLFLRLWTEGKVGPETLVSRYFPGTPVGDAGVTVADLLYHRSGLPPFVPFFAQALT
HHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHH
AHPELLDADCPSALRARVRDEVIQAAAATPLAAEPQTLAAYSDVGFILLGEILSRAAGAP
CCCHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCC
LDTLFSRHVAEPLGLSARFHRLTDFPADAMPAPTGATRPREPAPGQETLWKDVPTQPTRL
HHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCC
GEVDDDNAWVMDGVAGHAGLFGTAVDVARFGQAVLDGCAGGAIIAPGPLWHRALATDPKV
CCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHCCCCCC
QASTRSMGFDSPSEGVSSAGHYIGDTPPGAVGHLGFTGTSLWVDLRRSLVVALVTNRVAN
CHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
GRQETRIRDFRPLFHDFVVEALELTETKQGHHG
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9274029; 9384377 [H]