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The map label for this gene is ybfF [C]

Identifier: 108757133

GI number: 108757133

Start: 6641727

End: 6642548

Strand: Direct

Name: ybfF [C]

Synonym: MXAN_5335

Alternate gene names: 108757133

Gene position: 6641727-6642548 (Clockwise)

Preceding gene: 108762811

Following gene: 108758776

Centisome position: 72.67

GC content: 69.1

Gene sequence:

>822_bases
GTGCATGCGCCCTTCGTCAGCGTCGTCATCCCCGCCTACAACGAGGGACAGCGGCTGCCTCGCTTCGTCGCGGAGCTCAC
GCGCGTGTTCCTCGAGCGGAGCGCCCCGCCGGTGGAGTTCGTCGTCGTCGACGATGGCAGCGCGCCCGAGCACGCCGAAC
TCCAGCGCGCGAGCGTAGAGGCGGCCCAGGCTCGCCTCGCCACCGAGGGGGCGCGGCACCAGTTCACCTACGTGGCGGCG
CCTCGCAACCAGGGTAAGGGCTCGGCCATCCGGCTCGGTTGGCGTCACGCGTCAGCGGGCGTCACGTGGCTGGCCTTCCT
GGACGCGGATGGAGCCATCAACGCCGAGGAGTTCCACCGGCTGGTGGCGCTGAGCGCCTCGGAGATGGCGCGGAACGTAG
ACCTCCTGGCCGGCTCACGCATCCTCATGGCCGGACGCCGCGTCGTGCGCAACCTCCACCGCCACCTGCAGGGCCGCATC
TTCGCCACGCTCACGGATGCGAACTTCAAACTCCACTTCTACGACACACAGTGCGGGGTGAAGTTCGTTCGCGCGGACAT
CCTGCGGCCGCTCCTGGACGTCCTCCAGGAGCAGCGCTGGCTGCTGGACGTGGAGTTGCTGGTGCTGCTGAAGCGCCAGG
GCGCGCGCTTCCTGGAGGTCCCCATCGACTGGGAGGACTTCGGAGGTTCCAAGGTCATCCCAGGGCTCGACGCGGCGCGC
ATGTTCTGGGGGCTGCTGCAGCTTCGTCGGCGACTGGAGCATGTGTCCCTGCCTACCCACCGTGACGCGTTGCCCGAAGG
CGAGCCACACGCCCAGCGGTAG

Upstream 100 bases:

>100_bases
CGTTCCAGGACTTCGGGCCACGCAGCCGGGTGCGTGCGAGGCGGGAACAGGCCGACACCTTGCATTGACGGCCCATCCGC
ACCTGTGCTCAATCGAACAC

Downstream 100 bases:

>100_bases
GCAGGAGCGTCACTGTGTAGGCGTGCAGCCCCGCCCTGCCTGCACGGCGACGCGGGCCCTCACCTCCAGTGACAAGGCCG
CTTGATTTCCGGACGGTACA

Product: group 2 family glycosyl transferase

Products: UDP; dolichyl beta-D-glucosyl phosphate

Alternate protein names: Glycosyl Transferase; Dolichyl-Phosphate Beta-Glucosyltransferase; Glycosyltransferase; Glycosyl Transferase Family 2 Protein; Dolichol-Phosphate Mannosyltransferase; GtrA Family Protein; Dolichol-P-Glucose Synthetase; Polysaccharide Biosynthesis Protein; Glycosyl Transferase Group 2 Family; Family 2 Glycosyltransferase; Dolichol-Phosphate Mannose Synthase; Glycolsyltransferase; Gtra-Like Glycosyl Transferase; Family Glycosyltransferase; Dolichyl-Phosphate Mannose Synthase Related Protein; Family 2 Glycosyl Transferase Protein; Group 2 Family Glycosyl Transferase; Family 2 Glycosyl Transferase; Polyprenol-Phosphate Glycosyltransferase; Cell Wall Biogenesis Glycosyltransferase-Like Protein

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MHAPFVSVVIPAYNEGQRLPRFVAELTRVFLERSAPPVEFVVVDDGSAPEHAELQRASVEAAQARLATEGARHQFTYVAA
PRNQGKGSAIRLGWRHASAGVTWLAFLDADGAINAEEFHRLVALSASEMARNVDLLAGSRILMAGRRVVRNLHRHLQGRI
FATLTDANFKLHFYDTQCGVKFVRADILRPLLDVLQEQRWLLDVELLVLLKRQGARFLEVPIDWEDFGGSKVIPGLDAAR
MFWGLLQLRRRLEHVSLPTHRDALPEGEPHAQR

Sequences:

>Translated_273_residues
MHAPFVSVVIPAYNEGQRLPRFVAELTRVFLERSAPPVEFVVVDDGSAPEHAELQRASVEAAQARLATEGARHQFTYVAA
PRNQGKGSAIRLGWRHASAGVTWLAFLDADGAINAEEFHRLVALSASEMARNVDLLAGSRILMAGRRVVRNLHRHLQGRI
FATLTDANFKLHFYDTQCGVKFVRADILRPLLDVLQEQRWLLDVELLVLLKRQGARFLEVPIDWEDFGGSKVIPGLDAAR
MFWGLLQLRRRLEHVSLPTHRDALPEGEPHAQR
>Mature_273_residues
MHAPFVSVVIPAYNEGQRLPRFVAELTRVFLERSAPPVEFVVVDDGSAPEHAELQRASVEAAQARLATEGARHQFTYVAA
PRNQGKGSAIRLGWRHASAGVTWLAFLDADGAINAEEFHRLVALSASEMARNVDLLAGSRILMAGRRVVRNLHRHLQGRI
FATLTDANFKLHFYDTQCGVKFVRADILRPLLDVLQEQRWLLDVELLVLLKRQGARFLEVPIDWEDFGGSKVIPGLDAAR
MFWGLLQLRRRLEHVSLPTHRDALPEGEPHAQR

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI7019323, Length=271, Percent_Identity=27.3062730627306, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI25146207, Length=264, Percent_Identity=30.3030303030303, Blast_Score=92, Evalue=4e-19,
Organism=Saccharomyces cerevisiae, GI6325029, Length=256, Percent_Identity=32.421875, Blast_Score=104, Evalue=2e-23,
Organism=Drosophila melanogaster, GI24582769, Length=254, Percent_Identity=33.0708661417323, Blast_Score=93, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.4.1.117

Molecular weight: Translated: 30682; Mature: 30682

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHAPFVSVVIPAYNEGQRLPRFVAELTRVFLERSAPPVEFVVVDDGSAPEHAELQRASVE
CCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHH
AAQARLATEGARHQFTYVAAPRNQGKGSAIRLGWRHASAGVTWLAFLDADGAINAEEFHR
HHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEEEEECCCCEEEEEEECCCCCCCHHHHHH
LVALSASEMARNVDLLAGSRILMAGRRVVRNLHRHLQGRIFATLTDANFKLHFYDTQCGV
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCEEEEEEECCCEEEEEEECHHHH
KFVRADILRPLLDVLQEQRWLLDVELLVLLKRQGARFLEVPIDWEDFGGSKVIPGLDAAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHCCCCCCCCCCHHHH
MFWGLLQLRRRLEHVSLPTHRDALPEGEPHAQR
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MHAPFVSVVIPAYNEGQRLPRFVAELTRVFLERSAPPVEFVVVDDGSAPEHAELQRASVE
CCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHH
AAQARLATEGARHQFTYVAAPRNQGKGSAIRLGWRHASAGVTWLAFLDADGAINAEEFHR
HHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEEEEECCCCEEEEEEECCCCCCCHHHHHH
LVALSASEMARNVDLLAGSRILMAGRRVVRNLHRHLQGRIFATLTDANFKLHFYDTQCGV
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCEEEEEEECCCEEEEEEECHHHH
KFVRADILRPLLDVLQEQRWLLDVELLVLLKRQGARFLEVPIDWEDFGGSKVIPGLDAAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHCCCCCCCCCCHHHH
MFWGLLQLRRRLEHVSLPTHRDALPEGEPHAQR
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: UDP-glucose; dolichyl phosphate

Specific reaction: UDP-glucose + dolichyl phosphate = UDP + dolichyl beta-D-glucosyl phosphate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA