Click here to switch to the map view.

The map label for this gene is crtB [H]

Identifier: 108757119

GI number: 108757119

Start: 1021919

End: 1022929

Strand: Direct

Name: crtB [H]

Synonym: MXAN_0896

Alternate gene names: 108757119

Gene position: 1021919-1022929 (Clockwise)

Preceding gene: 108761900

Following gene: 108758051

Centisome position: 11.18

GC content: 73.1

Gene sequence:

>1011_bases
GTGAGCCCGCCTGTCGACAAGGCGCTGGTGGCGCGCGGCTATGTGCTGGCGAAGCAGGTGACGCGCCATCACGCCAAGAG
CTTCTTCTTCGCCTCGTACCTGCTCTTCGGCCTGCGCCGGAGGGCGGCGTTCGCGCTCTACGCCTTCTGCCGGCGCCTGG
ACGACATGGTGGACGGGGACGACGCGGCGAGCGCGGCCGATGCGTTGCCGGTGCGGCTGGCGCGGGCGCGGCAGCGCGTG
GCGGAGCTGTACCTGCCCATGCCGGAGCTGGCCTCGCGCGAGCTGGGGCCGCCCGCGGACCGGGTGAAGGGCAGCGAGGC
CGCGACGCCGTGGGACGCGCGGGAGTTCGCTGCGCTCGAGCACACGGTGCGCCACTTCCGGATTCCGGAGCAGCCCTTCC
AGGACCTCATCTCCGGCATGGAGATGGACCTGACGAAGCACCGCTACGCCACCTGGGAGGAGCTGGACCTCTACTGCTAC
CGGGTGGCGGGCGTGGTGGGGCTGATGCTGACGCCGGTGCTGGGGTGCTCGGACGCGGCGGCGGTGGAGCCCGCGGCCGA
CCTGGGCCGGGCCATGCAGCTCACCAACATCCTCCGCGACGTGCGCGAGGACCTGGAGCGCGGCCGGGTGTACCTGCCCG
CGGAGGAGTTGGCCGCCTTCGGATTGTCGGAGGACGACTTGCGGCGCGGACAGGTGGGCGCGCGCTGGCGGTCCTTCATG
CGCTTCCAGGTGGAGCGCTCGCGGGCGTACTACGCGCGGGCGGCGGCCGGGGTGCGCTACCTGACGGGCTTCGGCAGTCA
GCGGATGGTGCGGCTGATGGGCGCCATCTACGGCGACATCCTGCGCGACATCGAAGCGCGCGACTACGACGTGTTCAGCG
CCCGGGCCCACGTGACGACGCGCCGCAAGCTCGCGCTGGCTTCCGCGGCCATGGTGCGGCCCGCCGCGGTGCTGCCCGCC
CCCCAGGGCGAGGTGCGCATGCCGCTGCTTCCCACCGGGGCGGGAGGGTGA

Upstream 100 bases:

>100_bases
CGCGGCTGGTGACGGAGCGGCTGATGACGTGGGCCCACGCGCAGGGCGTTTCGTTGTCGCCTCGGACGGCCGCCGCCACG
CCACTGGAAGGGGTGGCCGC

Downstream 100 bases:

>100_bases
GGGCGTCATGCGTGGCGAGGGAATGAAGACGGAGCTTCGGCGGCGCATGGGAGGTGGAGCATGAAGCGCACCCGCGTCGC
GGTGGTAGGCGGCGGCATCG

Product: phytoene synthetase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 335

Protein sequence:

>336_residues
MSPPVDKALVARGYVLAKQVTRHHAKSFFFASYLLFGLRRRAAFALYAFCRRLDDMVDGDDAASAADALPVRLARARQRV
AELYLPMPELASRELGPPADRVKGSEAATPWDAREFAALEHTVRHFRIPEQPFQDLISGMEMDLTKHRYATWEELDLYCY
RVAGVVGLMLTPVLGCSDAAAVEPAADLGRAMQLTNILRDVREDLERGRVYLPAEELAAFGLSEDDLRRGQVGARWRSFM
RFQVERSRAYYARAAAGVRYLTGFGSQRMVRLMGAIYGDILRDIEARDYDVFSARAHVTTRRKLALASAAMVRPAAVLPA
PQGEVRMPLLPTGAGG

Sequences:

>Translated_336_residues
MSPPVDKALVARGYVLAKQVTRHHAKSFFFASYLLFGLRRRAAFALYAFCRRLDDMVDGDDAASAADALPVRLARARQRV
AELYLPMPELASRELGPPADRVKGSEAATPWDAREFAALEHTVRHFRIPEQPFQDLISGMEMDLTKHRYATWEELDLYCY
RVAGVVGLMLTPVLGCSDAAAVEPAADLGRAMQLTNILRDVREDLERGRVYLPAEELAAFGLSEDDLRRGQVGARWRSFM
RFQVERSRAYYARAAAGVRYLTGFGSQRMVRLMGAIYGDILRDIEARDYDVFSARAHVTTRRKLALASAAMVRPAAVLPA
PQGEVRMPLLPTGAGG
>Mature_335_residues
SPPVDKALVARGYVLAKQVTRHHAKSFFFASYLLFGLRRRAAFALYAFCRRLDDMVDGDDAASAADALPVRLARARQRVA
ELYLPMPELASRELGPPADRVKGSEAATPWDAREFAALEHTVRHFRIPEQPFQDLISGMEMDLTKHRYATWEELDLYCYR
VAGVVGLMLTPVLGCSDAAAVEPAADLGRAMQLTNILRDVREDLERGRVYLPAEELAAFGLSEDDLRRGQVGARWRSFMR
FQVERSRAYYARAAAGVRYLTGFGSQRMVRLMGAIYGDILRDIEARDYDVFSARAHVTTRRKLALASAAMVRPAAVLPAP
QGEVRMPLLPTGAGG

Specific function: Catalyzes the reaction from prephytoene diphosphate to phytoene [H]

COG id: COG1562

COG function: function code I; Phytoene/squalene synthetase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phytoene/squalene synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002060
- InterPro:   IPR019845
- InterPro:   IPR008949 [H]

Pfam domain/function: PF00494 SQS_PSY [H]

EC number: =2.5.1.32 [H]

Molecular weight: Translated: 37393; Mature: 37262

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: PS01044 SQUALEN_PHYTOEN_SYN_1 ; PS01045 SQUALEN_PHYTOEN_SYN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPPVDKALVARGYVLAKQVTRHHAKSFFFASYLLFGLRRRAAFALYAFCRRLDDMVDGD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DAASAADALPVRLARARQRVAELYLPMPELASRELGPPADRVKGSEAATPWDAREFAALE
CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHCCCCCCCCCCCHHHHHHHH
HTVRHFRIPEQPFQDLISGMEMDLTKHRYATWEELDLYCYRVAGVVGLMLTPVLGCSDAA
HHHHHHCCCCHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
AVEPAADLGRAMQLTNILRDVREDLERGRVYLPAEELAAFGLSEDDLRRGQVGARWRSFM
HCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEECHHHHHHCCCCHHHHHHCHHHHHHHHHH
RFQVERSRAYYARAAAGVRYLTGFGSQRMVRLMGAIYGDILRDIEARDYDVFSARAHVTT
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
RRKLALASAAMVRPAAVLPAPQGEVRMPLLPTGAGG
HHHHHHHHHHHHCCHHHCCCCCCCEECCCCCCCCCC
>Mature Secondary Structure 
SPPVDKALVARGYVLAKQVTRHHAKSFFFASYLLFGLRRRAAFALYAFCRRLDDMVDGD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DAASAADALPVRLARARQRVAELYLPMPELASRELGPPADRVKGSEAATPWDAREFAALE
CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHCCCCCCCCCCCHHHHHHHH
HTVRHFRIPEQPFQDLISGMEMDLTKHRYATWEELDLYCYRVAGVVGLMLTPVLGCSDAA
HHHHHHCCCCHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
AVEPAADLGRAMQLTNILRDVREDLERGRVYLPAEELAAFGLSEDDLRRGQVGARWRSFM
HCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEECHHHHHHCCCCHHHHHHCHHHHHHHHHH
RFQVERSRAYYARAAAGVRYLTGFGSQRMVRLMGAIYGDILRDIEARDYDVFSARAHVTT
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
RRKLALASAAMVRPAAVLPAPQGEVRMPLLPTGAGG
HHHHHHHHHHHHCCHHHCCCCCCCEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8018713; 8905231 [H]