| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is ina [H]
Identifier: 108757063
GI number: 108757063
Start: 3689404
End: 3690849
Strand: Direct
Name: ina [H]
Synonym: MXAN_3149
Alternate gene names: 108757063
Gene position: 3689404-3690849 (Clockwise)
Preceding gene: 108760800
Following gene: 108763572
Centisome position: 40.37
GC content: 60.58
Gene sequence:
>1446_bases GTGTCTGGGTGTCAGGCCTGGCGAAAGGGGTGGGACATGTGCAGCGAGCATTCACCTATCGAGCGGCTTTGCCGCGTTCC TCCAAGTCCAGAACTCCGGAGCAGGATGAAGGAGCGTTTCCAGGGTATCCAGGCCGTATCGGAGAACCTCTTTGGCCGAC GGCTTCTCCTTCGTGAGACGCACGCCATGGGGTTGAACGACGGCCTCATCATCCCAGGCTCGTATTTCCCGCTGGGGACC GGGCCGAATCGGGTCCGCAGCTTCGCCCTTGAGCGCCAGCCACTTCGGGGGCAAGTGCGCGTCATCGTCGTCCTCGTCGA CTTCGAAGACAGGCCCATGAATCGAAGCCGGCAGGAATTCGAGGACCTGTTCTTCTCACAAGGGAAGATCCAGACAGGAA GTGTGCGGGAATATTTCGAGGAGGCCAGTCATGGGCTCGTCGACATCGTGGGGCAGGTCGTCGGTCCGTATCGCATGCCT TGCAAGCTGGCCCAGTACGCTGGGAACGGTTCGGGCACTGACAATCCGGAGCCCAACGCGCGGACCATGGCGAGGCATGC CGCCGAAGCCGCGGCCAGCGTGGACTTCGCGCCCTACGACAACGATGGAAACGGCTTCGTCGACGCGTTCATCGTGGTCC ACTCAGGCGGTGGCGCGGAGCAGACCGGCAGCGCTGGTGACATCTGGTCGCACAAGTGGGTTCTTGTCGGCGGGGAACAC AATGCGCAGGGGGCGAAGATCTTCGGGTATTTGACCATCCCGGAGGATGCGAAGATTGGCGTCTGTTGCCATGAAATCGG GCACCTCGTGTTCGGCTGGCCGGACCTGTACGACGCGGATGGCTCCTCGGAAGGGCTCGGGAACTGGTGCTTGATGGCGG GTGGAAGCTGGAACAACAAAGGCGATGTCCCGGCCCATCCATCCGCTTGGTGCAAGGCCAGGCAGGGATGGGTCTCCATC GTCAACTACACCGCCAACAAGAGCGTGAACTTCGCTGACGTCAAGACGGAGCACTCGGTGCACAGGCTTTGGAAGAACGG GGTGCCGGGCTCCGAGTACTTCCTGGTCGAGAACCGCCAGCAGAACCAGTACGACAGATTCCTGCCGGGTTCGGGACTGC TCGTGTATCACGTGGATGAGTCCATTCCGGACAATACGAACGAAGTCCATCCCAGAGTTCGCTTGGTTCAGGCGGATGCC TTGGAGGACTTGGACCGTGCCGTCAACCGGGGCGACGACGGGGATCCATTCCCAGGTCGCTCTGGTAATGCTCGCTTTGA TTTCAACACCCATCCGAGCTCCCGTTCGTATTCCGGGCGTGACAGTTGCGTGTCCATTTCCGACATCAGCCCTTCCGGGA TGACAATGACGGCTCGTGTTGAAGTCAACAGGGCACAGAAAACCAGAGACGTCCTGCAGCAACTTGTCAATGACTGGCCT GAGTGA
Upstream 100 bases:
>100_bases CGAACCAGGGGTTGCTTCGAAGACAGCCCCCTCGCGGAGAAGGTTCTGGCACTGACTGTGCAGCTCAGACAGGAGCCAGG ATGAGACAGTCGGACAAGAG
Downstream 100 bases:
>100_bases GCACGCGGTGCTGGCCTCGAGGGATGACGCTTATGGTGCAGATTCAGGAGAACTGGGCCGATGTGAGGGGGCAAGTCCTC TCATGGCGTCAGCAGAGTGA
Product: M6 family peptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 481; Mature: 480
Protein sequence:
>481_residues MSGCQAWRKGWDMCSEHSPIERLCRVPPSPELRSRMKERFQGIQAVSENLFGRRLLLRETHAMGLNDGLIIPGSYFPLGT GPNRVRSFALERQPLRGQVRVIVVLVDFEDRPMNRSRQEFEDLFFSQGKIQTGSVREYFEEASHGLVDIVGQVVGPYRMP CKLAQYAGNGSGTDNPEPNARTMARHAAEAAASVDFAPYDNDGNGFVDAFIVVHSGGGAEQTGSAGDIWSHKWVLVGGEH NAQGAKIFGYLTIPEDAKIGVCCHEIGHLVFGWPDLYDADGSSEGLGNWCLMAGGSWNNKGDVPAHPSAWCKARQGWVSI VNYTANKSVNFADVKTEHSVHRLWKNGVPGSEYFLVENRQQNQYDRFLPGSGLLVYHVDESIPDNTNEVHPRVRLVQADA LEDLDRAVNRGDDGDPFPGRSGNARFDFNTHPSSRSYSGRDSCVSISDISPSGMTMTARVEVNRAQKTRDVLQQLVNDWP E
Sequences:
>Translated_481_residues MSGCQAWRKGWDMCSEHSPIERLCRVPPSPELRSRMKERFQGIQAVSENLFGRRLLLRETHAMGLNDGLIIPGSYFPLGT GPNRVRSFALERQPLRGQVRVIVVLVDFEDRPMNRSRQEFEDLFFSQGKIQTGSVREYFEEASHGLVDIVGQVVGPYRMP CKLAQYAGNGSGTDNPEPNARTMARHAAEAAASVDFAPYDNDGNGFVDAFIVVHSGGGAEQTGSAGDIWSHKWVLVGGEH NAQGAKIFGYLTIPEDAKIGVCCHEIGHLVFGWPDLYDADGSSEGLGNWCLMAGGSWNNKGDVPAHPSAWCKARQGWVSI VNYTANKSVNFADVKTEHSVHRLWKNGVPGSEYFLVENRQQNQYDRFLPGSGLLVYHVDESIPDNTNEVHPRVRLVQADA LEDLDRAVNRGDDGDPFPGRSGNARFDFNTHPSSRSYSGRDSCVSISDISPSGMTMTARVEVNRAQKTRDVLQQLVNDWP E >Mature_480_residues SGCQAWRKGWDMCSEHSPIERLCRVPPSPELRSRMKERFQGIQAVSENLFGRRLLLRETHAMGLNDGLIIPGSYFPLGTG PNRVRSFALERQPLRGQVRVIVVLVDFEDRPMNRSRQEFEDLFFSQGKIQTGSVREYFEEASHGLVDIVGQVVGPYRMPC KLAQYAGNGSGTDNPEPNARTMARHAAEAAASVDFAPYDNDGNGFVDAFIVVHSGGGAEQTGSAGDIWSHKWVLVGGEHN AQGAKIFGYLTIPEDAKIGVCCHEIGHLVFGWPDLYDADGSSEGLGNWCLMAGGSWNNKGDVPAHPSAWCKARQGWVSIV NYTANKSVNFADVKTEHSVHRLWKNGVPGSEYFLVENRQQNQYDRFLPGSGLLVYHVDESIPDNTNEVHPRVRLVQADAL EDLDRAVNRGDDGDPFPGRSGNARFDFNTHPSSRSYSGRDSCVSISDISPSGMTMTARVEVNRAQKTRDVLQQLVNDWPE
Specific function: Neutral metalloprotease that is secreted to degrade antibacterial proteins produced by the insect host for its defense (attacins and cecropins). Probably degrades some unknown crucial protein(s) too, since it is toxic when injected to insect larvae [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M6 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012300 - InterPro: IPR008757 [H]
Pfam domain/function: PF05547 Peptidase_M6 [H]
EC number: NA
Molecular weight: Translated: 53251; Mature: 53120
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGCQAWRKGWDMCSEHSPIERLCRVPPSPELRSRMKERFQGIQAVSENLFGRRLLLRET CCHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HAMGLNDGLIIPGSYFPLGTGPNRVRSFALERQPLRGQVRVIVVLVDFEDRPMNRSRQEF HHCCCCCCEECCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCHHHHH EDLFFSQGKIQTGSVREYFEEASHGLVDIVGQVVGPYRMPCKLAQYAGNGSGTDNPEPNA HHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCH RTMARHAAEAAASVDFAPYDNDGNGFVDAFIVVHSGGGAEQTGSAGDIWSHKWVLVGGEH HHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCC NAQGAKIFGYLTIPEDAKIGVCCHEIGHLVFGWPDLYDADGSSEGLGNWCLMAGGSWNNK CCCCCEEEEEEECCCCCCEEHHHHHHCCCEECCCCCCCCCCCCCCCCCEEEEECCCCCCC GDVPAHPSAWCKARQGWVSIVNYTANKSVNFADVKTEHSVHRLWKNGVPGSEYFLVENRQ CCCCCCCHHHHHHHCCEEEEEEEECCCCCCCHHCCCHHHHHHHHHCCCCCCEEEEEECCC QNQYDRFLPGSGLLVYHVDESIPDNTNEVHPRVRLVQADALEDLDRAVNRGDDGDPFPGR CCCHHHCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHCCCCCCCCCCC SGNARFDFNTHPSSRSYSGRDSCVSISDISPSGMTMTARVEVNRAQKTRDVLQQLVNDWP CCCEEEECCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECHHHHHHHHHHHHHHHHCC E C >Mature Secondary Structure SGCQAWRKGWDMCSEHSPIERLCRVPPSPELRSRMKERFQGIQAVSENLFGRRLLLRET CHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HAMGLNDGLIIPGSYFPLGTGPNRVRSFALERQPLRGQVRVIVVLVDFEDRPMNRSRQEF HHCCCCCCEECCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCHHHHH EDLFFSQGKIQTGSVREYFEEASHGLVDIVGQVVGPYRMPCKLAQYAGNGSGTDNPEPNA HHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCH RTMARHAAEAAASVDFAPYDNDGNGFVDAFIVVHSGGGAEQTGSAGDIWSHKWVLVGGEH HHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCC NAQGAKIFGYLTIPEDAKIGVCCHEIGHLVFGWPDLYDADGSSEGLGNWCLMAGGSWNNK CCCCCEEEEEEECCCCCCEEHHHHHHCCCEECCCCCCCCCCCCCCCCCEEEEECCCCCCC GDVPAHPSAWCKARQGWVSIVNYTANKSVNFADVKTEHSVHRLWKNGVPGSEYFLVENRQ CCCCCCCHHHHHHHCCEEEEEEEECCCCCCCHHCCCHHHHHHHHHCCCCCCEEEEEECCC QNQYDRFLPGSGLLVYHVDESIPDNTNEVHPRVRLVQADALEDLDRAVNRGDDGDPFPGR CCCHHHCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHCCCCCCCCCCC SGNARFDFNTHPSSRSYSGRDSCVSISDISPSGMTMTARVEVNRAQKTRDVLQQLVNDWP CCCEEEECCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECHHHHHHHHHHHHHHHHCC E C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2089225; 6421577 [H]