| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is yhcV [H]
Identifier: 108756953
GI number: 108756953
Start: 2732145
End: 2732561
Strand: Direct
Name: yhcV [H]
Synonym: MXAN_2351
Alternate gene names: 108756953
Gene position: 2732145-2732561 (Clockwise)
Preceding gene: 108763663
Following gene: 108762014
Centisome position: 29.89
GC content: 69.06
Gene sequence:
>417_bases ATGCGGATTGGCGAGCTGATGACCAAGAACCTGGAGACCATCGAAGCGGGCGAGCCCATCCGGGCCGCGGCGCTGAGGAT GCGCACGTGCAACATCGGCTCCCTGCCGGTGCTGGAGGGTGGGCAACTGGTGGGCATGCTGACGGACCGGGACATCGCGG TGCGGTCCGCGGCGCTGGGGCAGGACCCGAACACCACGCCCGTGCGCGAGGTGATGACGGCCACGGTGATCACCTGCGAC GTGGACGCGACGCTCGAGGTGGCGGAGAAGGTGATGGAGGAGAAGATGGTGCGGCGCCTCGTGGTGGTGGACGGTGAACG GCGGCCGGTGGGGCTCTTGAGCCTGGACGACCTGGCCACGGTGCCAGAGGAAGTCCTGCACGCGGGCGAGGTGCTGGAGC GGCTCCAGCAGGTCTGA
Upstream 100 bases:
>100_bases GCTCCTCGCTCCAGGGCCAGGCGCAATCCGGGAGGCGACGGCGGGGCGCCGGGGTTCAACGGGTGTGGGGAGGGGCGTCA TGCCAAGTGAGGAGCGTGCA
Downstream 100 bases:
>100_bases AGCGACGGGGCGCGAGCGGTGCGGCGTTTCTCACCGCCCGCGCCCTGGTGTCACCCTCAGGCGTTCGGGGCCGGACGGCA CGATGCGACGAGCTCCGCCG
Product: CBS domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MRIGELMTKNLETIEAGEPIRAAALRMRTCNIGSLPVLEGGQLVGMLTDRDIAVRSAALGQDPNTTPVREVMTATVITCD VDATLEVAEKVMEEKMVRRLVVVDGERRPVGLLSLDDLATVPEEVLHAGEVLERLQQV
Sequences:
>Translated_138_residues MRIGELMTKNLETIEAGEPIRAAALRMRTCNIGSLPVLEGGQLVGMLTDRDIAVRSAALGQDPNTTPVREVMTATVITCD VDATLEVAEKVMEEKMVRRLVVVDGERRPVGLLSLDDLATVPEEVLHAGEVLERLQQV >Mature_138_residues MRIGELMTKNLETIEAGEPIRAAALRMRTCNIGSLPVLEGGQLVGMLTDRDIAVRSAALGQDPNTTPVREVMTATVITCD VDATLEVAEKVMEEKMVRRLVVVDGERRPVGLLSLDDLATVPEEVLHAGEVLERLQQV
Specific function: Unknown
COG id: COG0517
COG function: function code R; FOG: CBS domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 [H]
Pfam domain/function: PF00571 CBS [H]
EC number: NA
Molecular weight: Translated: 15018; Mature: 15018
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIGELMTKNLETIEAGEPIRAAALRMRTCNIGSLPVLEGGQLVGMLTDRDIAVRSAALG CCCHHHHHCCCHHHCCCCCHHHHHHHHHCCCCCCCCEECCCEEEEEECCCCHHHHHHHCC QDPNTTPVREVMTATVITCDVDATLEVAEKVMEEKMVRRLVVVDGERRPVGLLSLDDLAT CCCCCCHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHH VPEEVLHAGEVLERLQQV HHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRIGELMTKNLETIEAGEPIRAAALRMRTCNIGSLPVLEGGQLVGMLTDRDIAVRSAALG CCCHHHHHCCCHHHCCCCCHHHHHHHHHCCCCCCCCEECCCEEEEEECCCCHHHHHHHCC QDPNTTPVREVMTATVITCDVDATLEVAEKVMEEKMVRRLVVVDGERRPVGLLSLDDLAT CCCCCCHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHH VPEEVLHAGEVLERLQQV HHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969498; 9384377 [H]