| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108756888
Identifier: 108756888
GI number: 108756888
Start: 7047514
End: 7048122
Strand: Reverse
Name: 108756888
Synonym: MXAN_5684
Alternate gene names: NA
Gene position: 7048122-7047514 (Counterclockwise)
Preceding gene: 108759944
Following gene: 108758652
Centisome position: 77.11
GC content: 65.19
Gene sequence:
>609_bases ATGAACACCCGCCGCCTGATTCTGTCCGCCTGTCTCGCCGCTTCGCTGTCCGCCTGCACGGGCCCGCGCGCCTTCACGCG TGGCACGTACGAGGACCCGAACACCATCGAGATGCTGTCGGACCGCTTCAACGAGAACGACCTGCAGCTCATCGCGAAGA AGATGGCGGAGTCGCTCGCCACCTCGCCGCGCTTCTCCCAGCCCCGGCCGGACGGCTCGCTGCCCATTGTCCTGGTGGGC AAGCTGAAGAACAGCACCTCCGAGCACATCGACATGCGCTCGCTGGGCGACAAGATTCAGACGGCGCTGGCGCAGACGGG CCGCTTCGCCCTGGTGGACCAGCAGGCGCGCCAGGACATCGCGGAGGAGTACGAGTACCAGCAGTCCGGCTACGTCGACC CGAACACCGCCAAGGGCCCGGGTCAGCAGACGTCGGTGGACTTCCTGATGACGGGCGACCTCGCCTCCATCATCCAGGAG GTCGGCCGGGACAAGCTCGTCTATTACAAGATGACCGCGAAGCTCAGCAACGTGCGGACCGGCCTCATCGAATGGACGGA CGAGAAGCAGATCCGCAAGAAGTTCGAGAAGCGCGGCGTGAGCTGGTAA
Upstream 100 bases:
>100_bases GCCTGACGGCCGGGTACCGCCGCGACGCGGTGCTCGCCTACAAGTGGAACTTCGAAGGCAGCCGCTTCGAATGCGAATGG AACTAGGAGTGACCCGCACC
Downstream 100 bases:
>100_bases CGGGCGCATCCTTCCATGTCCATCCACTCCCGCAGCCCGGTCCGCCTGAGCGGGTGGGGCGCGCTCGCGCTCGCGAGCGT GCTCCTCCTGTCGTCGGGCT
Product: putative lipoprotein
Products: NA
Alternate protein names: Membrane Lipoprotein Lipid Attachment Site
Number of amino acids: Translated: 202; Mature: 202
Protein sequence:
>202_residues MNTRRLILSACLAASLSACTGPRAFTRGTYEDPNTIEMLSDRFNENDLQLIAKKMAESLATSPRFSQPRPDGSLPIVLVG KLKNSTSEHIDMRSLGDKIQTALAQTGRFALVDQQARQDIAEEYEYQQSGYVDPNTAKGPGQQTSVDFLMTGDLASIIQE VGRDKLVYYKMTAKLSNVRTGLIEWTDEKQIRKKFEKRGVSW
Sequences:
>Translated_202_residues MNTRRLILSACLAASLSACTGPRAFTRGTYEDPNTIEMLSDRFNENDLQLIAKKMAESLATSPRFSQPRPDGSLPIVLVG KLKNSTSEHIDMRSLGDKIQTALAQTGRFALVDQQARQDIAEEYEYQQSGYVDPNTAKGPGQQTSVDFLMTGDLASIIQE VGRDKLVYYKMTAKLSNVRTGLIEWTDEKQIRKKFEKRGVSW >Mature_202_residues MNTRRLILSACLAASLSACTGPRAFTRGTYEDPNTIEMLSDRFNENDLQLIAKKMAESLATSPRFSQPRPDGSLPIVLVG KLKNSTSEHIDMRSLGDKIQTALAQTGRFALVDQQARQDIAEEYEYQQSGYVDPNTAKGPGQQTSVDFLMTGDLASIIQE VGRDKLVYYKMTAKLSNVRTGLIEWTDEKQIRKKFEKRGVSW
Specific function: Unknown
COG id: COG3417
COG function: function code R; Collagen-binding surface adhesin SpaP (antigen I/II family)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22599; Mature: 22599
Theoretical pI: Translated: 8.65; Mature: 8.65
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTRRLILSACLAASLSACTGPRAFTRGTYEDPNTIEMLSDRFNENDLQLIAKKMAESLA CCHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH TSPRFSQPRPDGSLPIVLVGKLKNSTSEHIDMRSLGDKIQTALAQTGRFALVDQQARQDI CCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHH AEEYEYQQSGYVDPNTAKGPGQQTSVDFLMTGDLASIIQEVGRDKLVYYKMTAKLSNVRT HHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHCCCCEEEEHHHHHHHHHHH GLIEWTDEKQIRKKFEKRGVSW HHHCCCCHHHHHHHHHHCCCCC >Mature Secondary Structure MNTRRLILSACLAASLSACTGPRAFTRGTYEDPNTIEMLSDRFNENDLQLIAKKMAESLA CCHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH TSPRFSQPRPDGSLPIVLVGKLKNSTSEHIDMRSLGDKIQTALAQTGRFALVDQQARQDI CCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHH AEEYEYQQSGYVDPNTAKGPGQQTSVDFLMTGDLASIIQEVGRDKLVYYKMTAKLSNVRT HHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHCCCCEEEEHHHHHHHHHHH GLIEWTDEKQIRKKFEKRGVSW HHHCCCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA