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The map label for this gene is yebA [H]

Identifier: 108756885

GI number: 108756885

Start: 3165746

End: 3166735

Strand: Reverse

Name: yebA [H]

Synonym: MXAN_2713

Alternate gene names: 108756885

Gene position: 3166735-3165746 (Counterclockwise)

Preceding gene: 108759395

Following gene: 108763087

Centisome position: 34.65

GC content: 71.01

Gene sequence:

>990_bases
ATGCCTTCGCACGCACCCGGCCGGAAGTATTCCAAAGCCCCTTTCCTGCTGCTCGCCCTGCTCGCACTTGGAGCAAAGGC
TGGTGCGGCCGAAACCGCCTCGGTCCCCGTGCGAACGTCCAGCGAGGACACTTCCCTGGAGGCCCCTCCCCAGCTGACGC
TGCACCCCGGCGCAGCCAAGCCGGGAGATCCGGTGCTGGTGACGGTGAGCGGCATGACGGCGCCGCCCACCGGCACGCTC
GCTGGACGCGCGCTGCGCTTCTTCCCCTGGGGCAATGGCTATCTGGCCGTCTCCGGCCTGCCGGTGGAGACGACGCCCGG
CGCGGCGCAGGTGACGGCAATGGGCCCCGTCACGCCGGGCGCACCGCAGGTGGAGCTGACGGGCACGCTGGACGTCGTGG
AGTCCGGCTACCCGTCTCGCGAGCTGCGCGTGGCCGGCAAGTACGTGAAGCCGCCCGCGTCGGTGCGCAAGCGCATGGCC
GCGGACCGCCGCGCCTTCGCGGAAGCCTTCGCCCAGGACTTCAGCGCGCCGCACTTCGCGCAGAACTTCGTGTGGCCGAG
GGCGGACCGCATCACCGCGCCCTTCGGCGACCGCCGCACCTTCAACGGAAAGCTGTCCAGTCAGCACTTCGGCGTGGACA
TCGACGGGGACCCGGGCACGCCCGTGCAGGCCGCCAACGACGGCACGGTGGTGATGGCGCGCGACAACTACGCGGCGGGC
AACACCGTGCTGGTGCACCACGGTGCGGGGCTCTACACGGCGTACTTCCACCTGTCCCGCATCGACGTGAAGACGGGCAC
CCAGGTGAAACAAGGCCAGCTGTTGGGCACGGTGGGCAGCACCGGCCGCGTCACCGGCCCGCACCTGCACTGGGGCGTGA
AGGTGGACGGGCTGTGGGTGGACGGTGAGCGCCTGCTGAAGCTGGACTTCTTCCCGCACCTGCCGCCCAGCGTCGCCCGG
GGCGGCAACACCGAGCTGGGCACGCCGTAA

Upstream 100 bases:

>100_bases
AGGCGACAAGCCGAGCGCTTTCGAGGGACGGAGCAGGCGTCCGGCGGCTCACCACCACACTCAGGGAAGAGTTGCGCGCG
ACGTGGTGTAAAAACGGCCC

Downstream 100 bases:

>100_bases
CCGGCGTCAGCGGTCGTTCCACTTCGGGGGACGCTTCTCCAGGAACGCGGAGATGCCCTCCCCCGCGTCGTCCGCCAGCA
CGTTCAGAGACAGCTGCGAG

Product: M23 peptidase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 329; Mature: 328

Protein sequence:

>329_residues
MPSHAPGRKYSKAPFLLLALLALGAKAGAAETASVPVRTSSEDTSLEAPPQLTLHPGAAKPGDPVLVTVSGMTAPPTGTL
AGRALRFFPWGNGYLAVSGLPVETTPGAAQVTAMGPVTPGAPQVELTGTLDVVESGYPSRELRVAGKYVKPPASVRKRMA
ADRRAFAEAFAQDFSAPHFAQNFVWPRADRITAPFGDRRTFNGKLSSQHFGVDIDGDPGTPVQAANDGTVVMARDNYAAG
NTVLVHHGAGLYTAYFHLSRIDVKTGTQVKQGQLLGTVGSTGRVTGPHLHWGVKVDGLWVDGERLLKLDFFPHLPPSVAR
GGNTELGTP

Sequences:

>Translated_329_residues
MPSHAPGRKYSKAPFLLLALLALGAKAGAAETASVPVRTSSEDTSLEAPPQLTLHPGAAKPGDPVLVTVSGMTAPPTGTL
AGRALRFFPWGNGYLAVSGLPVETTPGAAQVTAMGPVTPGAPQVELTGTLDVVESGYPSRELRVAGKYVKPPASVRKRMA
ADRRAFAEAFAQDFSAPHFAQNFVWPRADRITAPFGDRRTFNGKLSSQHFGVDIDGDPGTPVQAANDGTVVMARDNYAAG
NTVLVHHGAGLYTAYFHLSRIDVKTGTQVKQGQLLGTVGSTGRVTGPHLHWGVKVDGLWVDGERLLKLDFFPHLPPSVAR
GGNTELGTP
>Mature_328_residues
PSHAPGRKYSKAPFLLLALLALGAKAGAAETASVPVRTSSEDTSLEAPPQLTLHPGAAKPGDPVLVTVSGMTAPPTGTLA
GRALRFFPWGNGYLAVSGLPVETTPGAAQVTAMGPVTPGAPQVELTGTLDVVESGYPSRELRVAGKYVKPPASVRKRMAA
DRRAFAEAFAQDFSAPHFAQNFVWPRADRITAPFGDRRTFNGKLSSQHFGVDIDGDPGTPVQAANDGTVVMARDNYAAGN
TVLVHHGAGLYTAYFHLSRIDVKTGTQVKQGQLLGTVGSTGRVTGPHLHWGVKVDGLWVDGERLLKLDFFPHLPPSVARG
GNTELGTP

Specific function: Could be involved in cell wall degradation or formation [H]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=109, Percent_Identity=44.0366972477064, Blast_Score=83, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR013731
- InterPro:   IPR016047
- InterPro:   IPR002886
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF01476 LysM; PF08525 OapA_N; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 34555; Mature: 34423

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSHAPGRKYSKAPFLLLALLALGAKAGAAETASVPVRTSSEDTSLEAPPQLTLHPGAAK
CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCCCCCEEECCCCCC
PGDPVLVTVSGMTAPPTGTLAGRALRFFPWGNGYLAVSGLPVETTPGAAQVTAMGPVTPG
CCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCEEEEEECCCCCC
APQVELTGTLDVVESGYPSRELRVAGKYVKPPASVRKRMAADRRAFAEAFAQDFSAPHFA
CCCEEEEEEEEHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
QNFVWPRADRITAPFGDRRTFNGKLSSQHFGVDIDGDPGTPVQAANDGTVVMARDNYAAG
HHCCCCCCCEEECCCCCCEEECCCCCCCEECEEECCCCCCCCEECCCCEEEEEECCCCCC
NTVLVHHGAGLYTAYFHLSRIDVKTGTQVKQGQLLGTVGSTGRVTGPHLHWGVKVDGLWV
CEEEEECCCCEEEEEEEEEEEEECCCCCEECCEEEEECCCCCCCCCCCEEEEEEEEEEEE
DGERLLKLDFFPHLPPSVARGGNTELGTP
CCCEEEEEECCCCCCHHHHCCCCCCCCCC
>Mature Secondary Structure 
PSHAPGRKYSKAPFLLLALLALGAKAGAAETASVPVRTSSEDTSLEAPPQLTLHPGAAK
CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCCCCCEEECCCCCC
PGDPVLVTVSGMTAPPTGTLAGRALRFFPWGNGYLAVSGLPVETTPGAAQVTAMGPVTPG
CCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCEEEEEECCCCCC
APQVELTGTLDVVESGYPSRELRVAGKYVKPPASVRKRMAADRRAFAEAFAQDFSAPHFA
CCCEEEEEEEEHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
QNFVWPRADRITAPFGDRRTFNGKLSSQHFGVDIDGDPGTPVQAANDGTVVMARDNYAAG
HHCCCCCCCEEECCCCCCEEECCCCCCCEECEEECCCCCCCCEECCCCEEEEEECCCCCC
NTVLVHHGAGLYTAYFHLSRIDVKTGTQVKQGQLLGTVGSTGRVTGPHLHWGVKVDGLWV
CEEEEECCCCEEEEEEEEEEEEECCCCCEECCEEEEECCCCCCCCCCCEEEEEEEEEEEE
DGERLLKLDFFPHLPPSVARGGNTELGTP
CCCEEEEEECCCCCCHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]