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The map label for this gene is 108756874

Identifier: 108756874

GI number: 108756874

Start: 5834320

End: 5835210

Strand: Reverse

Name: 108756874

Synonym: MXAN_4650

Alternate gene names: NA

Gene position: 5835210-5834320 (Counterclockwise)

Preceding gene: 108759913

Following gene: 108763000

Centisome position: 63.84

GC content: 65.77

Gene sequence:

>891_bases
GTGGACGATGTCCTGACGCCAATCTTGATCGGCAGCTCGGCGCTCCTCTTCGCGGGCGCCGTGGGCTTCCTGGGCCTGGG
GCTGTACCAGACGATGCTGGAGCGCTTCCTGTCGGAGGTCCGTGACGAGTCCACGGGCGGCATGAAGGGCTTCGGCTCGG
TGGCCATCCGCCGCCTGGGCGCGATGAACCGCCGCTTCATGTGGCCCGGCTACGAGGCCAAGGCGCGCCGCAACCTCATC
AAGGCGGGCGAGCCGCAGGCGTACAAGCCCGAGGACATCATGGCGCTGCAGGAAGTCAGCGCGGTGGTGGGCCTCATCAT
GGGCCTCATCCTGCTCAACGGCTTCGGCGTGAGCCTGGTGTGGGCGCCGCTGTTCCTGCTCTTCGGCATGTACTACCCGC
TGATGTGGCTGAACGACCAGGTGAAGAAGCGCCACCTGCTCATCAGCCGCGCGCTGCCTTACAGCCTGGACCTGCTGACG
CTGTCGGTGGAAGCCGGCCTGGACTTCACCGCGGCACTGGCCAAGGTGGTGGAGAAGGGCAAGCCGGGGCCGCTGCGCGA
GGAGCTGCAGTTGGTGCTCAAGCAGCTGAAGATGGGCAAGACGCGTGAGGAAGGCCTCAAGAGCATGATTGTCCGCGTGG
ACCTGCCGCCCCTGACCACCTTCGTCACCGCGCTCATCCAGGCGGACAAGATGGGGACCAGCTTGGGCAAGGTGCTGCGC
ATCCAGTCCACGCAGATGCGCATCGACCGCACCCAGCGCGCGGAGAAGCTGGCCGGCGAGGCGCCGGTGAAGATGCTCTT
TCCGCTCATCGCGTGCATCTTCCCCACGGTGTTCATGGTGCTGTTCGGGCCCATCGTGTTCCAATTCATGTTCGGAAACG
TCGCGGGGTAG

Upstream 100 bases:

>100_bases
ATCTTCGGTTGGATCCTCGTGATCATCATCGCCATCATGGAAGTGATGGGCATCCTCATCATCCGGCGCATCGTCAACAT
CGATATCTGAGAGGTGCACC

Downstream 100 bases:

>100_bases
CGCCCCGTGCCCATCCTCCTGACCATCACGCAGGGGCTCCAGCAGGGACGGGAGCTCACCTTCGAGGCGGCCGAGGTCAA
CATCGGCCGCACCTCGGAGA

Product: type II secretion system protein F domain

Products: NA

Alternate protein names: Flp Pilus Assembly Protein TadC; Type II Secretion System F Domain Protein; Integral Membrane Protein; Type II/IV Secretion System Protein TadC Subfamily; Type II Secretion System F Domain-Containing Protein; Flp Pilus Assembly Protein; Bacterial Type II Secretion System Protein F Domain; Pilus Assembly Protein; TadC Protein; Tad Secretion System Secretion Accessory Protein; Type II Secretion System Protein F; Type II Secretion System F Domain; Tight Adherence TadC-Like Transmembrane Protein; Pilus Component Protein; Type II Secretion System; TadC Pilus Assembly Protein; TadC Family Type II/IV Secretion System Protein; TadC Component Of Type IV Pilus; Type II Secretion System Protein F Domain; Type II Secretion System Protein F Domain Protein; Tight Adherence TadC-Related Transmembrane Protein; Secretion System Protein TadC; Tyrosine Phenol-Lyase; Pilus Assembly Protein TadC; Putative Tight Adherence TadC-Like Transmembrane Protein; TadC Subunit; Components Of Type IV Pilus TadC; Pilus Assemble Protein; Type II Secretion System F Protein; Component Of Type IV Pilus; Von Willebrand Factor Type A; Component Of Pilus Protein; Type II Secretion System Integral Membrane Subunit; Components Of Type IV Pilus

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MDDVLTPILIGSSALLFAGAVGFLGLGLYQTMLERFLSEVRDESTGGMKGFGSVAIRRLGAMNRRFMWPGYEAKARRNLI
KAGEPQAYKPEDIMALQEVSAVVGLIMGLILLNGFGVSLVWAPLFLLFGMYYPLMWLNDQVKKRHLLISRALPYSLDLLT
LSVEAGLDFTAALAKVVEKGKPGPLREELQLVLKQLKMGKTREEGLKSMIVRVDLPPLTTFVTALIQADKMGTSLGKVLR
IQSTQMRIDRTQRAEKLAGEAPVKMLFPLIACIFPTVFMVLFGPIVFQFMFGNVAG

Sequences:

>Translated_296_residues
MDDVLTPILIGSSALLFAGAVGFLGLGLYQTMLERFLSEVRDESTGGMKGFGSVAIRRLGAMNRRFMWPGYEAKARRNLI
KAGEPQAYKPEDIMALQEVSAVVGLIMGLILLNGFGVSLVWAPLFLLFGMYYPLMWLNDQVKKRHLLISRALPYSLDLLT
LSVEAGLDFTAALAKVVEKGKPGPLREELQLVLKQLKMGKTREEGLKSMIVRVDLPPLTTFVTALIQADKMGTSLGKVLR
IQSTQMRIDRTQRAEKLAGEAPVKMLFPLIACIFPTVFMVLFGPIVFQFMFGNVAG
>Mature_296_residues
MDDVLTPILIGSSALLFAGAVGFLGLGLYQTMLERFLSEVRDESTGGMKGFGSVAIRRLGAMNRRFMWPGYEAKARRNLI
KAGEPQAYKPEDIMALQEVSAVVGLIMGLILLNGFGVSLVWAPLFLLFGMYYPLMWLNDQVKKRHLLISRALPYSLDLLT
LSVEAGLDFTAALAKVVEKGKPGPLREELQLVLKQLKMGKTREEGLKSMIVRVDLPPLTTFVTALIQADKMGTSLGKVLR
IQSTQMRIDRTQRAEKLAGEAPVKMLFPLIACIFPTVFMVLFGPIVFQFMFGNVAG

Specific function: Unknown

COG id: COG2064

COG function: function code NU; Flp pilus assembly protein TadC

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32689; Mature: 32689

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDVLTPILIGSSALLFAGAVGFLGLGLYQTMLERFLSEVRDESTGGMKGFGSVAIRRLG
CCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
AMNRRFMWPGYEAKARRNLIKAGEPQAYKPEDIMALQEVSAVVGLIMGLILLNGFGVSLV
HHCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
WAPLFLLFGMYYPLMWLNDQVKKRHLLISRALPYSLDLLTLSVEAGLDFTAALAKVVEKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEEHHHCCCHHHHHHHHHHCC
KPGPLREELQLVLKQLKMGKTREEGLKSMIVRVDLPPLTTFVTALIQADKMGTSLGKVLR
CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
IQSTQMRIDRTQRAEKLAGEAPVKMLFPLIACIFPTVFMVLFGPIVFQFMFGNVAG
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDDVLTPILIGSSALLFAGAVGFLGLGLYQTMLERFLSEVRDESTGGMKGFGSVAIRRLG
CCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
AMNRRFMWPGYEAKARRNLIKAGEPQAYKPEDIMALQEVSAVVGLIMGLILLNGFGVSLV
HHCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
WAPLFLLFGMYYPLMWLNDQVKKRHLLISRALPYSLDLLTLSVEAGLDFTAALAKVVEKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEEHHHCCCHHHHHHHHHHCC
KPGPLREELQLVLKQLKMGKTREEGLKSMIVRVDLPPLTTFVTALIQADKMGTSLGKVLR
CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
IQSTQMRIDRTQRAEKLAGEAPVKMLFPLIACIFPTVFMVLFGPIVFQFMFGNVAG
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA