| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is tolQ [H]
Identifier: 108756839
GI number: 108756839
Start: 933959
End: 934639
Strand: Direct
Name: tolQ [H]
Synonym: MXAN_0818
Alternate gene names: 108756839
Gene position: 933959-934639 (Clockwise)
Preceding gene: 108760717
Following gene: 108762409
Centisome position: 10.22
GC content: 68.72
Gene sequence:
>681_bases ATGCCGTCCATCGCCGTTTTCGCCCAGGCCCACCCGGAGCAACTGGGGTGGCTCAGCAGCAAGCTGCTGGGGGTGACGCT CACTTCCGCGGAGTGGGTGCTGTGGGTGCTGGTGTGCCTGTCGGTGCTCTCCATCGCCATCATGCTGGAGCGCACGGTGT ACTTCGCCCGTCACCGGCTGCCGGACTCGGAGGCGCTGGCGGTGCGGCTGTCGCGCGGTGAGCTGGACGCGGTGAAGGCC GCCATCCAGGGGCGTCAGGGCATGGAGGCCGCCATCCTGCGTGAAGGGCTGGCGTGCGCCGACCAGGGCGCGGACACGGT GGAGCAGGTGATTGCCTCCACCCTGTCGCGTGAGCGCCCACGCTACGAGCGCTTCCTGTCCTACCTGGGCACGCTGGGCA ACAACGCGCCGTTCATCGGTCTGTTCGGCACGGTGCTGGGCATCATCAAGGCCTTCAATGACCTGGGGAAGATGAACGCC CAGGGCGGCGGCGGGGCCATGCAGCAGACCGTCATGGCCGGCATCTCCGAAGCGCTCGTCGCCACGGCCGTGGGTCTGGC GGTGGCGATTCCGGCGGTGGTGGCCTTCAACGTCTTCAGCCGTCAGCTCAAGACGCTCACCAGCCGCGCCAATGCCCTGG GCCACGCGCTGGTGGGCAGTCTTCGCTCGGAGGCCCGTTAG
Upstream 100 bases:
>100_bases CCGTCAGAGGGGCCCGGAAAAAATCCGACCACCAGGTGACACTTCAATTCGGGCCCGGTGTTCTGGTCGCGCCAACGTGC TTCGCGAGGGGAAAGACACC
Downstream 100 bases:
>100_bases GCCATGGCGGGCAGCGCGCAGGACAACGACGACGAAATCACCGGCATCAACGTCACCCCGCTGGTGGACGTGGTGCTGGT GCTGCTCATCATCTTCATGG
Product: MotA/TolQ/ExbB proton channel family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 226; Mature: 225
Protein sequence:
>226_residues MPSIAVFAQAHPEQLGWLSSKLLGVTLTSAEWVLWVLVCLSVLSIAIMLERTVYFARHRLPDSEALAVRLSRGELDAVKA AIQGRQGMEAAILREGLACADQGADTVEQVIASTLSRERPRYERFLSYLGTLGNNAPFIGLFGTVLGIIKAFNDLGKMNA QGGGGAMQQTVMAGISEALVATAVGLAVAIPAVVAFNVFSRQLKTLTSRANALGHALVGSLRSEAR
Sequences:
>Translated_226_residues MPSIAVFAQAHPEQLGWLSSKLLGVTLTSAEWVLWVLVCLSVLSIAIMLERTVYFARHRLPDSEALAVRLSRGELDAVKA AIQGRQGMEAAILREGLACADQGADTVEQVIASTLSRERPRYERFLSYLGTLGNNAPFIGLFGTVLGIIKAFNDLGKMNA QGGGGAMQQTVMAGISEALVATAVGLAVAIPAVVAFNVFSRQLKTLTSRANALGHALVGSLRSEAR >Mature_225_residues PSIAVFAQAHPEQLGWLSSKLLGVTLTSAEWVLWVLVCLSVLSIAIMLERTVYFARHRLPDSEALAVRLSRGELDAVKAA IQGRQGMEAAILREGLACADQGADTVEQVIASTLSRERPRYERFLSYLGTLGNNAPFIGLFGTVLGIIKAFNDLGKMNAQ GGGGAMQQTVMAGISEALVATAVGLAVAIPAVVAFNVFSRQLKTLTSRANALGHALVGSLRSEAR
Specific function: Involved in the tonB-independent uptake of proteins [H]
COG id: COG0811
COG function: function code U; Biopolymer transport proteins
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the exbB/tolQ family [H]
Homologues:
Organism=Escherichia coli, GI1786958, Length=93, Percent_Identity=45.1612903225806, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1789381, Length=179, Percent_Identity=35.195530726257, Blast_Score=73, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002898 - InterPro: IPR014163 [H]
Pfam domain/function: PF01618 MotA_ExbB [H]
EC number: NA
Molecular weight: Translated: 23977; Mature: 23846
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSIAVFAQAHPEQLGWLSSKLLGVTLTSAEWVLWVLVCLSVLSIAIMLERTVYFARHRL CCCCHHHHHCCHHHHHHHHHHHHHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PDSEALAVRLSRGELDAVKAAIQGRQGMEAAILREGLACADQGADTVEQVIASTLSRERP CCCHHHEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCH RYERFLSYLGTLGNNAPFIGLFGTVLGIIKAFNDLGKMNAQGGGGAMQQTVMAGISEALV HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH ATAVGLAVAIPAVVAFNVFSRQLKTLTSRANALGHALVGSLRSEAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PSIAVFAQAHPEQLGWLSSKLLGVTLTSAEWVLWVLVCLSVLSIAIMLERTVYFARHRL CCCHHHHHCCHHHHHHHHHHHHHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PDSEALAVRLSRGELDAVKAAIQGRQGMEAAILREGLACADQGADTVEQVIASTLSRERP CCCHHHEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCH RYERFLSYLGTLGNNAPFIGLFGTVLGIIKAFNDLGKMNAQGGGGAMQQTVMAGISEALV HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH ATAVGLAVAIPAVVAFNVFSRQLKTLTSRANALGHALVGSLRSEAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8955385; 10984043 [H]