| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
Click here to switch to the map view.
The map label for this gene is phoR [H]
Identifier: 108756768
GI number: 108756768
Start: 821386
End: 823965
Strand: Direct
Name: phoR [H]
Synonym: MXAN_0720
Alternate gene names: 108756768
Gene position: 821386-823965 (Clockwise)
Preceding gene: 108763972
Following gene: 108759666
Centisome position: 8.99
GC content: 73.8
Gene sequence:
>2580_bases TTGCCTCGTACCTGCGTCCGGGCACCGTTGTCGCAGGTGGAGGGGCGTCATTATCTCCGACACCCCATGTCGCGCCGCCC TTCTTCATCCTCGCGGCCCGCGTCCGTGGACGAGCGCGAACCCGAGCGGTCCGTCTCCACGGAACCGGACGCGGTGTGTC CGCCGCGAGGGCTGGAGTCCCAGGTGGGTGGGGGTGGGGCCGGGAATGCCGTCCGCTTGCGCGGCAGTGACGACGCGGAG GAGCGCCTCGCGTTCCTGGCCAGCGCGGGCGAGCTGCTGTCGTCCTCTCTGGATTCGGGCACGGTGCTCAAGCGGCTGGC GGAGTTGGCCGTGCCGCTGTTGGCGGACTGGTGCGCGGTGGACGTGCTCACGGCGGACGGGCGGGTTGAGCGGGTGGCCG CGGCGCACCGCCTGGCGGAGCAGGTGCCGCTGGTGCACGAGCTGGCACGCCTCCAGCCCCTGGACCTGACGGCCGAGGGC GGTATCCCGGAGGTGCTGCGCACCGGCAAGGCCGCCCTCCTTCCCGAAGTCCTGGACGGGATGCTGCCGGGCGTGGTGCT CACGGAGGCGCAGTTGGAGGTGGCGCGGCGCCTGGGCATCCGGGCGGGCCTCATCGTGCCGCTGCTGGCGCGAGGCCGCG TGCTCGGTGCGCTGTCGCTGGTCCGGGGCGACTCGGACGGTGTGCCCGGCGCGTCCGACCTGGAGCTGGCGTTGGAGCTG GCCCGGCGCGCCAGCCTGTCCCTGGACAACGCGCTGCTGTACGCGGAGGCGCGCGGCGCGCAGCAGCGCACCGAGCGCCT CCAGGCCATCACCGCGGCCCTGTCCCGCGCGGCCACCGCCGAGGACGTGGCCGAAGCGCTGATGCGCGAGGAGTTGCGCC CCGCGGGCCCGGCGCGCGGCGCGGTGCTCGGCATGCTGGAGGATGGCCGGCTGCACGTGCTGGGCTCCTTCGGTTACGCA CCGGCGGTGCTGGATACCCTGCGAGGGCTGTGGGCGGACCAGGTGCCCGGCGTGGACCGGGCGCTGGAGCAGTTGGAGCC GCAGTGGTTCTCCACCCACGCGGCGGTGCCGCGCGCCGTGCCCGAGTGGGCGCGGGACCTCGTCCAGGGCGTGGGGCCCG GGGCCTGGGCGGTGCTGCCCTTGAAGGTGGAGCACCGCATCCGGGGCTTCCTGCTGTTCACGTGGGACGGGCCGCAGGTG TTCCTCGCGGAGGAGCGCGGCTTCCTGTCCTCGCTGGCGCAGCAGTGCGCGCAGGCGCTGGAGCGCGCGGCGCTGTACGA GGCGCTGCGTGAGCGCGGCGGCAAGCTGCACGTGGCGCTGGAGGCGGGCAAGGAGGCCGAGGAGCGGCTCTTCTTCCTGC TGGAGGCGAGCCGCGCGCTGGCCGAGCACCTGGACGACGTGGAGTGGACGCTGGAGCACCTGGCGCGAGTGGCCGCGCGA AACGTGGCCACGTACTGCCTGGTGGAGTTGATGGGAGCGGACGGCGTGCCGCGCGCCGTGGCCGCGTCCCACCGGGAGCC AGAGCGGGACGTGTCGGTGCTGGCCTCGCTGTCCCTTCCATGGGTGGAGGGCACGCTGCACCCGGCGCGCGAGTGCTTCC TGTCGGGGGAGACGCGCTTCTTGCCCGAGGTGGGGCCGGAGCTGCGCGAGCGCATGTGCCAGGGGCCCGAGCACCGCGCG TTCCTGGAGGCGCTGAATCCACACTCGCTGCTCGCGGTGGCGGTGCGCATGCGCGGACGCACGCTGGGCGTCATCACGCT GGGCACCGCGGCCCCCTGCCGCCGGCTGGTCACCGCCGACGTGGCCATGGCGGAGGAGCTGGCGCGGCGCGTGGCGGTGG CGTTGGAGAACGCGTCGCTGTACCGGGACGCGCAGGCCGCGGTGCGTCTGCGCGACGAGTTCCTCTCCGTGGCCAGCCAT GAGCTGAAGACGCCGCTCACCAGCCTGAAGCTCCAGCACGGGCTCATCGACCGCGCCGCGCTCGGAGACGTGGGGGACAA GGTGCGGCCCCGGCTGGCCACGGCCGTGCGGCAGGTGCAGCGGCTGAGCGCGCTGGTGGACAGCCTGCTGGACGTCAGCC GGATTTCGCTGGGGCGGCTGATGCTGGAGCCGTCCGACGTGGACCTGGGCCAGGCGGTGCGCGACGCGGTGGACCGCATG GAGGAGGTGTTCTCCCAGGCGGGCTGTCCGGTGCGGGTGGAGGTGCCGGGCCCGCTGCCGGGGAAGTGGGATGCGCTGCG GCTGGACCAGGTGCTGGTGAACCTGCTCACCAACGCGGCCAAGTACGGCGCGGGCCGGCCTGTCCTGGTGGAGGCGGCCT TCGAGGGCGAGGAGATGGTGCGGGTGTCGGTGCGTGACGAGGGCATCGGCATCGCCGCGGAGGACCTGCCGCGCCTGTTC GGCCGCTTCGAGCGCGCGGTGTCCGACCGGCACTATGGCGGCCTGGGACTGGGGCTCTACATCAGCCGGCAGATCGTGGA CGCCATGGGCGGCCGCATCGAGGTGGAGAGCCGGCCCGGGCTGGGTTCCATCTTCACCGTGCGCCTGCCCCGGTCCACGG CACAATGCGCGCCATGGTGA
Upstream 100 bases:
>100_bases TTCCTGCTCATCCTCTACGCCATCTGGGACAAGAACCGCGCGAACCGCCACGGCTCCGGGTAGGGCCGCGCCGTTGTCTG GCAGGTCATCTGGCTGACAC
Downstream 100 bases:
>100_bases CCGTGGGAAGGGCGGACGTGCCCAAGGCGTTGTCGGTGGCGAAGTTGCGGAAGGAGTACGGCGGCAAGGCCGCGGTGGAG GGTGTCTCCTTCGAGGTGGG
Product: sensor histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 859; Mature: 858
Protein sequence:
>859_residues MPRTCVRAPLSQVEGRHYLRHPMSRRPSSSSRPASVDEREPERSVSTEPDAVCPPRGLESQVGGGGAGNAVRLRGSDDAE ERLAFLASAGELLSSSLDSGTVLKRLAELAVPLLADWCAVDVLTADGRVERVAAAHRLAEQVPLVHELARLQPLDLTAEG GIPEVLRTGKAALLPEVLDGMLPGVVLTEAQLEVARRLGIRAGLIVPLLARGRVLGALSLVRGDSDGVPGASDLELALEL ARRASLSLDNALLYAEARGAQQRTERLQAITAALSRAATAEDVAEALMREELRPAGPARGAVLGMLEDGRLHVLGSFGYA PAVLDTLRGLWADQVPGVDRALEQLEPQWFSTHAAVPRAVPEWARDLVQGVGPGAWAVLPLKVEHRIRGFLLFTWDGPQV FLAEERGFLSSLAQQCAQALERAALYEALRERGGKLHVALEAGKEAEERLFFLLEASRALAEHLDDVEWTLEHLARVAAR NVATYCLVELMGADGVPRAVAASHREPERDVSVLASLSLPWVEGTLHPARECFLSGETRFLPEVGPELRERMCQGPEHRA FLEALNPHSLLAVAVRMRGRTLGVITLGTAAPCRRLVTADVAMAEELARRVAVALENASLYRDAQAAVRLRDEFLSVASH ELKTPLTSLKLQHGLIDRAALGDVGDKVRPRLATAVRQVQRLSALVDSLLDVSRISLGRLMLEPSDVDLGQAVRDAVDRM EEVFSQAGCPVRVEVPGPLPGKWDALRLDQVLVNLLTNAAKYGAGRPVLVEAAFEGEEMVRVSVRDEGIGIAAEDLPRLF GRFERAVSDRHYGGLGLGLYISRQIVDAMGGRIEVESRPGLGSIFTVRLPRSTAQCAPW
Sequences:
>Translated_859_residues MPRTCVRAPLSQVEGRHYLRHPMSRRPSSSSRPASVDEREPERSVSTEPDAVCPPRGLESQVGGGGAGNAVRLRGSDDAE ERLAFLASAGELLSSSLDSGTVLKRLAELAVPLLADWCAVDVLTADGRVERVAAAHRLAEQVPLVHELARLQPLDLTAEG GIPEVLRTGKAALLPEVLDGMLPGVVLTEAQLEVARRLGIRAGLIVPLLARGRVLGALSLVRGDSDGVPGASDLELALEL ARRASLSLDNALLYAEARGAQQRTERLQAITAALSRAATAEDVAEALMREELRPAGPARGAVLGMLEDGRLHVLGSFGYA PAVLDTLRGLWADQVPGVDRALEQLEPQWFSTHAAVPRAVPEWARDLVQGVGPGAWAVLPLKVEHRIRGFLLFTWDGPQV FLAEERGFLSSLAQQCAQALERAALYEALRERGGKLHVALEAGKEAEERLFFLLEASRALAEHLDDVEWTLEHLARVAAR NVATYCLVELMGADGVPRAVAASHREPERDVSVLASLSLPWVEGTLHPARECFLSGETRFLPEVGPELRERMCQGPEHRA FLEALNPHSLLAVAVRMRGRTLGVITLGTAAPCRRLVTADVAMAEELARRVAVALENASLYRDAQAAVRLRDEFLSVASH ELKTPLTSLKLQHGLIDRAALGDVGDKVRPRLATAVRQVQRLSALVDSLLDVSRISLGRLMLEPSDVDLGQAVRDAVDRM EEVFSQAGCPVRVEVPGPLPGKWDALRLDQVLVNLLTNAAKYGAGRPVLVEAAFEGEEMVRVSVRDEGIGIAAEDLPRLF GRFERAVSDRHYGGLGLGLYISRQIVDAMGGRIEVESRPGLGSIFTVRLPRSTAQCAPW >Mature_858_residues PRTCVRAPLSQVEGRHYLRHPMSRRPSSSSRPASVDEREPERSVSTEPDAVCPPRGLESQVGGGGAGNAVRLRGSDDAEE RLAFLASAGELLSSSLDSGTVLKRLAELAVPLLADWCAVDVLTADGRVERVAAAHRLAEQVPLVHELARLQPLDLTAEGG IPEVLRTGKAALLPEVLDGMLPGVVLTEAQLEVARRLGIRAGLIVPLLARGRVLGALSLVRGDSDGVPGASDLELALELA RRASLSLDNALLYAEARGAQQRTERLQAITAALSRAATAEDVAEALMREELRPAGPARGAVLGMLEDGRLHVLGSFGYAP AVLDTLRGLWADQVPGVDRALEQLEPQWFSTHAAVPRAVPEWARDLVQGVGPGAWAVLPLKVEHRIRGFLLFTWDGPQVF LAEERGFLSSLAQQCAQALERAALYEALRERGGKLHVALEAGKEAEERLFFLLEASRALAEHLDDVEWTLEHLARVAARN VATYCLVELMGADGVPRAVAASHREPERDVSVLASLSLPWVEGTLHPARECFLSGETRFLPEVGPELRERMCQGPEHRAF LEALNPHSLLAVAVRMRGRTLGVITLGTAAPCRRLVTADVAMAEELARRVAVALENASLYRDAQAAVRLRDEFLSVASHE LKTPLTSLKLQHGLIDRAALGDVGDKVRPRLATAVRQVQRLSALVDSLLDVSRISLGRLMLEPSDVDLGQAVRDAVDRME EVFSQAGCPVRVEVPGPLPGKWDALRLDQVLVNLLTNAAKYGAGRPVLVEAAFEGEEMVRVSVRDEGIGIAAEDLPRLFG RFERAVSDRHYGGLGLGLYISRQIVDAMGGRIEVESRPGLGSIFTVRLPRSTAQCAPW
Specific function: Member of the two-component regulatory system phoP/phoR involved in the alkaline phosphatase genes regulation. PhoR may function as a membrane-associated protein kinase that phosphorylates phoP in response to environmental signals [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
Organism=Escherichia coli, GI1789149, Length=231, Percent_Identity=34.1991341991342, Blast_Score=116, Evalue=6e-27, Organism=Escherichia coli, GI145693157, Length=245, Percent_Identity=33.0612244897959, Blast_Score=108, Evalue=1e-24, Organism=Escherichia coli, GI1786912, Length=286, Percent_Identity=32.1678321678322, Blast_Score=105, Evalue=8e-24, Organism=Escherichia coli, GI1788713, Length=232, Percent_Identity=26.7241379310345, Blast_Score=102, Evalue=1e-22, Organism=Escherichia coli, GI48994928, Length=237, Percent_Identity=30.8016877637131, Blast_Score=100, Evalue=5e-22, Organism=Escherichia coli, GI1788393, Length=279, Percent_Identity=30.4659498207885, Blast_Score=90, Evalue=8e-19, Organism=Escherichia coli, GI1786600, Length=226, Percent_Identity=33.1858407079646, Blast_Score=88, Evalue=3e-18, Organism=Escherichia coli, GI87081816, Length=237, Percent_Identity=31.2236286919831, Blast_Score=83, Evalue=9e-17, Organism=Escherichia coli, GI1790436, Length=222, Percent_Identity=30.6306306306306, Blast_Score=79, Evalue=1e-15, Organism=Escherichia coli, GI1790346, Length=221, Percent_Identity=29.8642533936652, Blast_Score=74, Evalue=5e-14, Organism=Escherichia coli, GI1786783, Length=227, Percent_Identity=29.0748898678414, Blast_Score=70, Evalue=4e-13, Organism=Escherichia coli, GI1788549, Length=262, Percent_Identity=25.1908396946565, Blast_Score=65, Evalue=1e-11, Organism=Escherichia coli, GI1789808, Length=211, Percent_Identity=27.4881516587678, Blast_Score=64, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR000014 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 92794; Mature: 92662
Theoretical pI: Translated: 5.81; Mature: 5.81
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRTCVRAPLSQVEGRHYLRHPMSRRPSSSSRPASVDEREPERSVSTEPDAVCPPRGLES CCCHHHHCCHHHHCCCHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC QVGGGGAGNAVRLRGSDDAEERLAFLASAGELLSSSLDSGTVLKRLAELAVPLLADWCAV CCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH DVLTADGRVERVAAAHRLAEQVPLVHELARLQPLDLTAEGGIPEVLRTGKAALLPEVLDG HEEECCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCEECCCCCHHHHHCCCHHHHHHHHHH MLPGVVLTEAQLEVARRLGIRAGLIVPLLARGRVLGALSLVRGDSDGVPGASDLELALEL HCCCCEEHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHH ARRASLSLDNALLYAEARGAQQRTERLQAITAALSRAATAEDVAEALMREELRPAGPARG HHHHCCCCCHHEEEHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCC AVLGMLEDGRLHVLGSFGYAPAVLDTLRGLWADQVPGVDRALEQLEPQWFSTHAAVPRAV CEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHCCCHHH PEWARDLVQGVGPGAWAVLPLKVEHRIRGFLLFTWDGPQVFLAEERGFLSSLAQQCAQAL HHHHHHHHHHCCCCCEEEEEEEECCCCCEEEEEEECCCEEEEEHHCCHHHHHHHHHHHHH ERAALYEALRERGGKLHVALEAGKEAEERLFFLLEASRALAEHLDDVEWTLEHLARVAAR HHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NVATYCLVELMGADGVPRAVAASHREPERDVSVLASLSLPWVEGTLHPARECFLSGETRF HHHHHHHHHHHCCCCCCHHHHHCCCCCHHHHHHHHHCCCCHHCCCCCHHHHHHHCCCCCC LPEVGPELRERMCQGPEHRAFLEALNPHSLLAVAVRMRGRTLGVITLGTAAPCRRLVTAD CCCCCHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHH VAMAEELARRVAVALENASLYRDAQAAVRLRDEFLSVASHELKTPLTSLKLQHGLIDRAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHH LGDVGDKVRPRLATAVRQVQRLSALVDSLLDVSRISLGRLMLEPSDVDLGQAVRDAVDRM HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHH EEVFSQAGCPVRVEVPGPLPGKWDALRLDQVLVNLLTNAAKYGAGRPVLVEAAFEGEEMV HHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEE RVSVRDEGIGIAAEDLPRLFGRFERAVSDRHYGGLGLGLYISRQIVDAMGGRIEVESRPG EEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHCCCEEEEECCCC LGSIFTVRLPRSTAQCAPW CCCEEEEEECCCCCCCCCC >Mature Secondary Structure PRTCVRAPLSQVEGRHYLRHPMSRRPSSSSRPASVDEREPERSVSTEPDAVCPPRGLES CCHHHHCCHHHHCCCHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC QVGGGGAGNAVRLRGSDDAEERLAFLASAGELLSSSLDSGTVLKRLAELAVPLLADWCAV CCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH DVLTADGRVERVAAAHRLAEQVPLVHELARLQPLDLTAEGGIPEVLRTGKAALLPEVLDG HEEECCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCEECCCCCHHHHHCCCHHHHHHHHHH MLPGVVLTEAQLEVARRLGIRAGLIVPLLARGRVLGALSLVRGDSDGVPGASDLELALEL HCCCCEEHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHH ARRASLSLDNALLYAEARGAQQRTERLQAITAALSRAATAEDVAEALMREELRPAGPARG HHHHCCCCCHHEEEHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCC AVLGMLEDGRLHVLGSFGYAPAVLDTLRGLWADQVPGVDRALEQLEPQWFSTHAAVPRAV CEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHCCCHHH PEWARDLVQGVGPGAWAVLPLKVEHRIRGFLLFTWDGPQVFLAEERGFLSSLAQQCAQAL HHHHHHHHHHCCCCCEEEEEEEECCCCCEEEEEEECCCEEEEEHHCCHHHHHHHHHHHHH ERAALYEALRERGGKLHVALEAGKEAEERLFFLLEASRALAEHLDDVEWTLEHLARVAAR HHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NVATYCLVELMGADGVPRAVAASHREPERDVSVLASLSLPWVEGTLHPARECFLSGETRF HHHHHHHHHHHCCCCCCHHHHHCCCCCHHHHHHHHHCCCCHHCCCCCHHHHHHHCCCCCC LPEVGPELRERMCQGPEHRAFLEALNPHSLLAVAVRMRGRTLGVITLGTAAPCRRLVTAD CCCCCHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHH VAMAEELARRVAVALENASLYRDAQAAVRLRDEFLSVASHELKTPLTSLKLQHGLIDRAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHH LGDVGDKVRPRLATAVRQVQRLSALVDSLLDVSRISLGRLMLEPSDVDLGQAVRDAVDRM HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHH EEVFSQAGCPVRVEVPGPLPGKWDALRLDQVLVNLLTNAAKYGAGRPVLVEAAFEGEEMV HHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEE RVSVRDEGIGIAAEDLPRLFGRFERAVSDRHYGGLGLGLYISRQIVDAMGGRIEVESRPG EEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHCCCEEEEECCCC LGSIFTVRLPRSTAQCAPW CCCEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3142862; 9387221; 9384377 [H]