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The map label for this gene is 108563943

Identifier: 108563943

GI number: 108563943

Start: 1581947

End: 1582540

Strand: Reverse

Name: 108563943

Synonym: HPAG1_1518

Alternate gene names: NA

Gene position: 1582540-1581947 (Counterclockwise)

Preceding gene: 108563944

Following gene: 108563942

Centisome position: 99.13

GC content: 36.03

Gene sequence:

>594_bases
ATGAAGCGCTCAAGCTTTACCTCTAATAGCGTTTTAAACTTTTTTGTGGTTTTGTCTTTCATCACGATAGGGCTAGTCTT
TTTCTTTTTGCGTTCCCAACCCACTAGCGTGGTCTCTAAAGAAAATATCCCTAAAATTGAATTAGAAAATTTTAAAGCGT
TTCAAATCAACGATAAAATCCTTGATCTGTCCATAGAAGGCAAAAAAGCTTTACAATACGATGATCATGAGATCTTTTTT
GATTCTAAAATCAAACGCTATGATGAAGACACCATTGAAAGCGTTGAGTCTCCTAAGGCCAAACGGCAGCAGGATTTGTA
TTTCTTCCCTAATGGGGTTACTTATAAAAGAAGCGACGATTCTAGTTTTTGGAGTGAAACAGGGATTTATAACCATAAAG
AGCAAAATTTTAAAGGCAAGGGCCGTTTCATTCTCACTTCAAAGGACAGCAAGATTGAAGGGCTTGACATTTCTTATTCG
CATGCTTTAGCCATTATTGAAGCTCAAAGCATTCAAGCCAATTTGTTTCTAGATGAAATCAAACAAAGCCAAAAAGAAAA
GAAAAAACTCCCCACTTTCAAAGGAGGATTTTAA

Upstream 100 bases:

>100_bases
TTGCTTAAAAATAAGGCCTATAAAGTGTTACAAAATTCAGGGGGCAAGGGGGCTGTTAGGGAAGCGATTGATTATCTTTT
AACATTAGAAGGCTTGCAAG

Downstream 100 bases:

>100_bases
TGCGTTGGTGGTGTTTTTTGGTGTGTTGTTTTGGTATTTTAAGCGTGATGGATGCTAAAAAATTAGAGAATAAAGGTTTG
AAAAAAGAAAGAGAGCTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MKRSSFTSNSVLNFFVVLSFITIGLVFFFLRSQPTSVVSKENIPKIELENFKAFQINDKILDLSIEGKKALQYDDHEIFF
DSKIKRYDEDTIESVESPKAKRQQDLYFFPNGVTYKRSDDSSFWSETGIYNHKEQNFKGKGRFILTSKDSKIEGLDISYS
HALAIIEAQSIQANLFLDEIKQSQKEKKKLPTFKGGF

Sequences:

>Translated_197_residues
MKRSSFTSNSVLNFFVVLSFITIGLVFFFLRSQPTSVVSKENIPKIELENFKAFQINDKILDLSIEGKKALQYDDHEIFF
DSKIKRYDEDTIESVESPKAKRQQDLYFFPNGVTYKRSDDSSFWSETGIYNHKEQNFKGKGRFILTSKDSKIEGLDISYS
HALAIIEAQSIQANLFLDEIKQSQKEKKKLPTFKGGF
>Mature_197_residues
MKRSSFTSNSVLNFFVVLSFITIGLVFFFLRSQPTSVVSKENIPKIELENFKAFQINDKILDLSIEGKKALQYDDHEIFF
DSKIKRYDEDTIESVESPKAKRQQDLYFFPNGVTYKRSDDSSFWSETGIYNHKEQNFKGKGRFILTSKDSKIEGLDISYS
HALAIIEAQSIQANLFLDEIKQSQKEKKKLPTFKGGF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22768; Mature: 22768

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRSSFTSNSVLNFFVVLSFITIGLVFFFLRSQPTSVVSKENIPKIELENFKAFQINDKI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCEEEECCEEEEEECCEE
LDLSIEGKKALQYDDHEIFFDSKIKRYDEDTIESVESPKAKRQQDLYFFPNGVTYKRSDD
EEEEECCCCCEECCCCEEEECCHHHHCCHHHHHHHCCCCCHHCCCEEECCCCEEEEECCC
SSFWSETGIYNHKEQNFKGKGRFILTSKDSKIEGLDISYSHALAIIEAQSIQANLFLDEI
CCHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHEEEEEEECCCCHHHHHHHH
KQSQKEKKKLPTFKGGF
HHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKRSSFTSNSVLNFFVVLSFITIGLVFFFLRSQPTSVVSKENIPKIELENFKAFQINDKI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCEEEECCEEEEEECCEE
LDLSIEGKKALQYDDHEIFFDSKIKRYDEDTIESVESPKAKRQQDLYFFPNGVTYKRSDD
EEEEECCCCCEECCCCEEEECCHHHHCCHHHHHHHCCCCCHHCCCEEECCCCEEEEECCC
SSFWSETGIYNHKEQNFKGKGRFILTSKDSKIEGLDISYSHALAIIEAQSIQANLFLDEI
CCHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHEEEEEEECCCCHHHHHHHH
KQSQKEKKKLPTFKGGF
HHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA