The gene/protein map for NC_008086 is currently unavailable.
Definition Helicobacter pylori HPAG1 chromosome, complete genome.
Accession NC_008086
Length 1,596,366

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The map label for this gene is trxA [H]

Identifier: 108563882

GI number: 108563882

Start: 1516678

End: 1516992

Strand: Direct

Name: trxA [H]

Synonym: HPAG1_1457

Alternate gene names: 108563882

Gene position: 1516678-1516992 (Clockwise)

Preceding gene: 108563881

Following gene: 108563883

Centisome position: 95.01

GC content: 40.32

Gene sequence:

>315_bases
ATGTTAGAAGTGATTAACGGGAAGAATTACGCAGAGAAAATCGCTCATCAAGCGGTGGTGGTTAATGTTGGGGCGAATTG
GTGTCCGGATTGCAGGAAGATTGAGCCGATCATGGAAAATTTAGCCAAAACTTACAAAGGCAAGGTGGAATTTTTTAAGG
TTTCTTTTGATGAGAGCCAGGATTTAAAAGAGAGTTTAGGCATTCGCAAGATCCCTACTTTGATTTTTTATAAAAACGCC
AAAGAAGTGGGTGAAAGGCTTGTAGAGCCTGGATCTTCAAAACCGATTGAAGACGCGATTAAAACGCTCTTATAA

Upstream 100 bases:

>100_bases
CTGCATGCGTTTATGGCTAATAGGGCTAATACTAAAGGGGATTAGCGCTTGAGTTATGCTATACTTCGGCGGTTGGGGGA
AATAAAAATTAAGGATTATC

Downstream 100 bases:

>100_bases
AGAGCGTTAAAGAGTCTTGTTATTAAAATAAAAACTCATAGAAATCTTTTTTAGCCCCTTTTTCTATAAAGGAGCTAACT
TCAAATAGCTTTTATCTTGT

Product: thioredoxin

Products: NA

Alternate protein names: Trx [H]

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MLEVINGKNYAEKIAHQAVVVNVGANWCPDCRKIEPIMENLAKTYKGKVEFFKVSFDESQDLKESLGIRKIPTLIFYKNA
KEVGERLVEPGSSKPIEDAIKTLL

Sequences:

>Translated_104_residues
MLEVINGKNYAEKIAHQAVVVNVGANWCPDCRKIEPIMENLAKTYKGKVEFFKVSFDESQDLKESLGIRKIPTLIFYKNA
KEVGERLVEPGSSKPIEDAIKTLL
>Mature_104_residues
MLEVINGKNYAEKIAHQAVVVNVGANWCPDCRKIEPIMENLAKTYKGKVEFFKVSFDESQDLKESLGIRKIPTLIFYKNA
KEVGERLVEPGSSKPIEDAIKTLL

Specific function: Participates in various redox reactions through the reversible oxidation of its active center dithiol to a disulfide and catalyzes dithiol-disulfide exchange reactions [H]

COG id: COG0526

COG function: function code OC; Thiol-disulfide isomerase and thioredoxins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Escherichia coli, GI1788936, Length=65, Percent_Identity=41.5384615384615, Blast_Score=62, Evalue=1e-11,
Organism=Escherichia coli, GI87082331, Length=67, Percent_Identity=37.3134328358209, Blast_Score=60, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005746
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR017937
- InterPro:   IPR013766
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00085 Thioredoxin [H]

EC number: 1.8.1.8 [C]

Molecular weight: Translated: 11725; Mature: 11725

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEVINGKNYAEKIAHQAVVVNVGANWCPDCRKIEPIMENLAKTYKGKVEFFKVSFDESQ
CCEECCCCCHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCH
DLKESLGIRKIPTLIFYKNAKEVGERLVEPGSSKPIEDAIKTLL
HHHHHCCCCCCCHHEEECCHHHHHHHHHCCCCCCCHHHHHHHHC
>Mature Secondary Structure
MLEVINGKNYAEKIAHQAVVVNVGANWCPDCRKIEPIMENLAKTYKGKVEFFKVSFDESQ
CCEECCCCCHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCH
DLKESLGIRKIPTLIFYKNAKEVGERLVEPGSSKPIEDAIKTLL
HHHHHCCCCCCCHHEEECCHHHHHHHHHCCCCCCCHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA