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The map label for this gene is 108563876

Identifier: 108563876

GI number: 108563876

Start: 1508628

End: 1509443

Strand: Direct

Name: 108563876

Synonym: HPAG1_1451

Alternate gene names: NA

Gene position: 1508628-1509443 (Clockwise)

Preceding gene: 108563875

Following gene: 108563877

Centisome position: 94.5

GC content: 40.81

Gene sequence:

>816_bases
TTGGAAAGGCATGTGAATTACACTTTAATCGGCGGGCTCTTCTTTTTATGCTTAGTGTGCATGGTAGGCTTTATTTTATG
GCTAGGCCATTTGGGATTAGATGACGGGAAGTATTATGAATACGTGGTCTATACGGACAAAGACTTGGGAGGCATTGCGA
CCAACTCGCCTGTTAATTACAAAGGGATTCAAGTGGGTAATGTCATCAAGGTGGGTTTTGCAAAGGATAAAGTGGGGGTG
GTCCGTTTGGATTTGATGATTAAATCCAGCGTTAAGATCCGCAAAGACTCCAAAGTGGCGGTTTCTTCTAGGGGGCTTAT
GGGGTTAAAATTTTTAGCCTTAGAGCAAAGCCACAATGAAGAATTTTATGGCAGTGGCGATAAAGGGGAGCGGATTTTGA
TCTTTAAAGAAGGGCTTATGGATCGCTTGAGCGTGGATGCTAATCAAGTGATGCAAGAAGTGATGAGAGCGATTAGGAAT
GTGAATAGGATTTTAGACGATGAAAATGTGGAAAAATTCAAGCACATTCTCGCCTCAGTAGATGATCTCATCGCTAACTT
GGATTCAAGAAAGACGCAATTTGACGCCTTGATTGGCAACGCTAACAATCTTGTTTCTAATGTCAATAATGTGGCTTTAG
ATGTGGATAAACGCATCAAACAGGGGCAATACGACTTTAAATCGATGTTTACTCCCTTAATCATGCAAGCGCAGTTGAGC
TTAAGAAACATTGATAATTTTGTGGAAAAAGGCTCTGCTCTGATAGACAAATTTGACGCTAACCCCTATAAAACGATTTT
TGGAGAAAGGAAATAA

Upstream 100 bases:

>100_bases
TATTAGAGTTTAATGGGGATTTAAAAGATTTTATTAAAAAAGCTCAAACTCAAGGGCTAGATGAAGGCAATTTATTCAAT
TCAACACGAGGAGAGAAATT

Downstream 100 bases:

>100_bases
TCATGAGAGCCACGGCGATAAAAATCTTTTCACTCTCATCAGCATTAGCCCTATTGTTTCAGGGTTGCTTGAGCATCAAT
TTAAAACAAATGCTGCCAGA

Product: ABC transport system substrate binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MERHVNYTLIGGLFFLCLVCMVGFILWLGHLGLDDGKYYEYVVYTDKDLGGIATNSPVNYKGIQVGNVIKVGFAKDKVGV
VRLDLMIKSSVKIRKDSKVAVSSRGLMGLKFLALEQSHNEEFYGSGDKGERILIFKEGLMDRLSVDANQVMQEVMRAIRN
VNRILDDENVEKFKHILASVDDLIANLDSRKTQFDALIGNANNLVSNVNNVALDVDKRIKQGQYDFKSMFTPLIMQAQLS
LRNIDNFVEKGSALIDKFDANPYKTIFGERK

Sequences:

>Translated_271_residues
MERHVNYTLIGGLFFLCLVCMVGFILWLGHLGLDDGKYYEYVVYTDKDLGGIATNSPVNYKGIQVGNVIKVGFAKDKVGV
VRLDLMIKSSVKIRKDSKVAVSSRGLMGLKFLALEQSHNEEFYGSGDKGERILIFKEGLMDRLSVDANQVMQEVMRAIRN
VNRILDDENVEKFKHILASVDDLIANLDSRKTQFDALIGNANNLVSNVNNVALDVDKRIKQGQYDFKSMFTPLIMQAQLS
LRNIDNFVEKGSALIDKFDANPYKTIFGERK
>Mature_271_residues
MERHVNYTLIGGLFFLCLVCMVGFILWLGHLGLDDGKYYEYVVYTDKDLGGIATNSPVNYKGIQVGNVIKVGFAKDKVGV
VRLDLMIKSSVKIRKDSKVAVSSRGLMGLKFLALEQSHNEEFYGSGDKGERILIFKEGLMDRLSVDANQVMQEVMRAIRN
VNRILDDENVEKFKHILASVDDLIANLDSRKTQFDALIGNANNLVSNVNNVALDVDKRIKQGQYDFKSMFTPLIMQAQLS
LRNIDNFVEKGSALIDKFDANPYKTIFGERK

Specific function: Unknown

COG id: COG1463

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, periplasmic component

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005586
- InterPro:   IPR003399 [H]

Pfam domain/function: PF03886 DUF330; PF02470 MCE [H]

EC number: NA

Molecular weight: Translated: 30514; Mature: 30514

Theoretical pI: Translated: 8.60; Mature: 8.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERHVNYTLIGGLFFLCLVCMVGFILWLGHLGLDDGKYYEYVVYTDKDLGGIATNSPVNY
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCC
KGIQVGNVIKVGFAKDKVGVVRLDLMIKSSVKIRKDSKVAVSSRGLMGLKFLALEQSHNE
CCEEECCEEEEECCCCCCCEEEEEEEECCCCEECCCCCEEECCCCCCCEEEEEEECCCCC
EFYGSGDKGERILIFKEGLMDRLSVDANQVMQEVMRAIRNVNRILDDENVEKFKHILASV
CCCCCCCCCCEEEEECCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
DDLIANLDSRKTQFDALIGNANNLVSNVNNVALDVDKRIKQGQYDFKSMFTPLIMQAQLS
HHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHEEEHHHHHHCCCCHHHHHHHHHHHHHHHH
LRNIDNFVEKGSALIDKFDANPYKTIFGERK
HHHHHHHHHHCHHHHHHCCCCCHHHHCCCCC
>Mature Secondary Structure
MERHVNYTLIGGLFFLCLVCMVGFILWLGHLGLDDGKYYEYVVYTDKDLGGIATNSPVNY
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCC
KGIQVGNVIKVGFAKDKVGVVRLDLMIKSSVKIRKDSKVAVSSRGLMGLKFLALEQSHNE
CCEEECCEEEEECCCCCCCEEEEEEEECCCCEECCCCCEEECCCCCCCEEEEEEECCCCC
EFYGSGDKGERILIFKEGLMDRLSVDANQVMQEVMRAIRNVNRILDDENVEKFKHILASV
CCCCCCCCCCEEEEECCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
DDLIANLDSRKTQFDALIGNANNLVSNVNNVALDVDKRIKQGQYDFKSMFTPLIMQAQLS
HHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHEEEHHHHHHCCCCHHHHHHHHHHHHHHHH
LRNIDNFVEKGSALIDKFDANPYKTIFGERK
HHHHHHHHHHCHHHHHHCCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12597275; 1551834 [H]