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The map label for this gene is ybhS [C]

Identifier: 108563852

GI number: 108563852

Start: 1485259

End: 1486389

Strand: Direct

Name: ybhS [C]

Synonym: HPAG1_1427

Alternate gene names: 108563852

Gene position: 1485259-1486389 (Clockwise)

Preceding gene: 108563851

Following gene: 108563853

Centisome position: 93.04

GC content: 39.26

Gene sequence:

>1131_bases
ATGAATTTTTTTAAAATCCTTTTAATGGAATTAAGGGCTATTGTTTCTCATAAGGGCGTTTTGCTAATCCTTATAGGCGC
TCCTTTAATCTATGGCTTATTATACCCTTTGCCTTATTTAAAAGACATCGTAACGCAGCAAAAAATCGCCCTTGTAGATG
AAGACAATTCCTTCCTTTCCAGGCAATTAGCCTTCATGGCGCAAAGCTCCAACGAGTTAGAAATCGCTTTTTTTAGCCCC
TCTATGCTGGAAGCCAAAAAGCTTTTGAAAGAAGAAAAAATTTATGGGATCTTGCATATCCCTTCGCATTTTGAAGCCAA
TATCCATAAACAAGTGCCTGTAACGATAGATTTTTATGCGAATTCCAATTACTTTTTGATTTATGGTGCGTTAGCGAATG
CGGTGGTGGAGAGCATCAACGCTTTAAATGATGAAATAAGGTTCAAACGCAACGCCCAAATAGAAGAAGCTGAATTAGGG
ACAGACGGGATTAAAATCAGGCCTATCGCTTTGTATAACCCTAGTGAGGGGTATTTGAATTACGCGCTCTCTAGCGTGTT
TATTTTCATCTTACACCAGGTGATGCTCATTGCAAGCAGCATGTTTACTAGCTCCAGGCGTTTGGAATTGGCCCTTTTAG
ACAAGAAAGAAATCGCTTTAAGGCTGTGCGCAAGACTCTTGGTGTTTATGGCAGCGTTTAGCGTTTTTATTTTATGGTAT
TTTGGGGCGCTGTTTTCTTTTTATGGGATCGAACGGCATGGAAGCGCTTTAATGGTGTTTTTGAATAGTTTGATTTTCAT
GCTTGCAACCTTGAGTTTGGGGTCGTTTTTAGGCGCATGGATCAAAAATGAAGCCCACACCACTCAAATCGTTTTGATTT
CTTCTTTGCCCTTGATCTTTATGATGGGTTTTGTGTGGCCTTTTGAATCCTTGCCCTCTTATTTACAGGTTTTTGTTCAA
ATAGTGCCTGCTTATCATGGGATCAGTTTGTTAGGGCGATTGAATCAAATGCATGCGGAATTTATAGATGTTTCTGTGCA
TTTTTATGCGCTTATTGCGATTTTTATCGTGAGTTTTATAGGGTGCGTATTCAAACTCAGCTCTTTAAAGAAAGCTTGTG
AAAACGCTTAA

Upstream 100 bases:

>100_bases
AGTCTTTAAATTCGTTAATGCCGCTTGTGTTCTTTTTAATCTTTTTAGTCTTAGGGCTTTTGATTTTTTATTTTTCTTTT
AAAAAAGATAGGGCTAGTGC

Downstream 100 bases:

>100_bases
AAACCTCATCACCTCCAAGCACCAGATTAAAGCGTCCCGCTTTTTAGGGTATCTTATGCCTTTTGATGATTTTGAAAAAA
CTCTTTTGCAATTGAAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: ABC-Type Multidrug Transport System Permease Component; ABC-Type Multidrug Transport System Protein; ABC-2 Type Transport System Permease Protein; Conserved Transporter; ABC Transporter Permease; Permease Component Of ABC Transporter; Transport-Related Membrane Protein; ABC-2 Type Transporter Superfamily; ABC-2 Type Transport System Permease; Integral Membrane Protein; Multidrug ABC Transporter Permease Component; ABC-2 Type Transporter Domain Protein; Abc-2 Type Transporter; Multidrug ABC Transporter Permease Protein; ABC-2 Type Transporter Family; ABC Transporter Transmembrane Protein; Antibiotic Transport System Permease Protein

Number of amino acids: Translated: 376; Mature: 376

Protein sequence:

>376_residues
MNFFKILLMELRAIVSHKGVLLILIGAPLIYGLLYPLPYLKDIVTQQKIALVDEDNSFLSRQLAFMAQSSNELEIAFFSP
SMLEAKKLLKEEKIYGILHIPSHFEANIHKQVPVTIDFYANSNYFLIYGALANAVVESINALNDEIRFKRNAQIEEAELG
TDGIKIRPIALYNPSEGYLNYALSSVFIFILHQVMLIASSMFTSSRRLELALLDKKEIALRLCARLLVFMAAFSVFILWY
FGALFSFYGIERHGSALMVFLNSLIFMLATLSLGSFLGAWIKNEAHTTQIVLISSLPLIFMMGFVWPFESLPSYLQVFVQ
IVPAYHGISLLGRLNQMHAEFIDVSVHFYALIAIFIVSFIGCVFKLSSLKKACENA

Sequences:

>Translated_376_residues
MNFFKILLMELRAIVSHKGVLLILIGAPLIYGLLYPLPYLKDIVTQQKIALVDEDNSFLSRQLAFMAQSSNELEIAFFSP
SMLEAKKLLKEEKIYGILHIPSHFEANIHKQVPVTIDFYANSNYFLIYGALANAVVESINALNDEIRFKRNAQIEEAELG
TDGIKIRPIALYNPSEGYLNYALSSVFIFILHQVMLIASSMFTSSRRLELALLDKKEIALRLCARLLVFMAAFSVFILWY
FGALFSFYGIERHGSALMVFLNSLIFMLATLSLGSFLGAWIKNEAHTTQIVLISSLPLIFMMGFVWPFESLPSYLQVFVQ
IVPAYHGISLLGRLNQMHAEFIDVSVHFYALIAIFIVSFIGCVFKLSSLKKACENA
>Mature_376_residues
MNFFKILLMELRAIVSHKGVLLILIGAPLIYGLLYPLPYLKDIVTQQKIALVDEDNSFLSRQLAFMAQSSNELEIAFFSP
SMLEAKKLLKEEKIYGILHIPSHFEANIHKQVPVTIDFYANSNYFLIYGALANAVVESINALNDEIRFKRNAQIEEAELG
TDGIKIRPIALYNPSEGYLNYALSSVFIFILHQVMLIASSMFTSSRRLELALLDKKEIALRLCARLLVFMAAFSVFILWY
FGALFSFYGIERHGSALMVFLNSLIFMLATLSLGSFLGAWIKNEAHTTQIVLISSLPLIFMMGFVWPFESLPSYLQVFVQ
IVPAYHGISLLGRLNQMHAEFIDVSVHFYALIAIFIVSFIGCVFKLSSLKKACENA

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42471; Mature: 42471

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFFKILLMELRAIVSHKGVLLILIGAPLIYGLLYPLPYLKDIVTQQKIALVDEDNSFLS
CHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHCHHHHHHHHHHHHEEEEECCHHHHH
RQLAFMAQSSNELEIAFFSPSMLEAKKLLKEEKIYGILHIPSHFEANIHKQVPVTIDFYA
HHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCEEEEEEE
NSNYFLIYGALANAVVESINALNDEIRFKRNAQIEEAELGTDGIKIRPIALYNPSEGYLN
CCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCEEEEEEEEECCCCHHHH
YALSSVFIFILHQVMLIASSMFTSSRRLELALLDKKEIALRLCARLLVFMAAFSVFILWY
HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHH
FGALFSFYGIERHGSALMVFLNSLIFMLATLSLGSFLGAWIKNEAHTTQIVLISSLPLIF
HHHHHHHHCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHH
MMGFVWPFESLPSYLQVFVQIVPAYHGISLLGRLNQMHAEFIDVSVHFYALIAIFIVSFI
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GCVFKLSSLKKACENA
HHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNFFKILLMELRAIVSHKGVLLILIGAPLIYGLLYPLPYLKDIVTQQKIALVDEDNSFLS
CHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHCHHHHHHHHHHHHEEEEECCHHHHH
RQLAFMAQSSNELEIAFFSPSMLEAKKLLKEEKIYGILHIPSHFEANIHKQVPVTIDFYA
HHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCEEEEEEE
NSNYFLIYGALANAVVESINALNDEIRFKRNAQIEEAELGTDGIKIRPIALYNPSEGYLN
CCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCEEEEEEEEECCCCHHHH
YALSSVFIFILHQVMLIASSMFTSSRRLELALLDKKEIALRLCARLLVFMAAFSVFILWY
HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHH
FGALFSFYGIERHGSALMVFLNSLIFMLATLSLGSFLGAWIKNEAHTTQIVLISSLPLIF
HHHHHHHHCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHH
MMGFVWPFESLPSYLQVFVQIVPAYHGISLLGRLNQMHAEFIDVSVHFYALIAIFIVSFI
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GCVFKLSSLKKACENA
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA