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The map label for this gene is rdxA [H]

Identifier: 108563828

GI number: 108563828

Start: 1459527

End: 1460903

Strand: Direct

Name: rdxA [H]

Synonym: HPAG1_1404

Alternate gene names: 108563828

Gene position: 1459527-1460903 (Clockwise)

Preceding gene: 108563820

Following gene: 108563831

Centisome position: 91.43

GC content: 41.18

Gene sequence:

>1377_bases
ATGCTTGAATCTTCTAGCCATTTTTTAAAATCGTTCCGCTTGAAGCGTTATATAGGGTTTTTATTGATTTCTTTAGCGCT
ATTAATCACGCCATTTGTTCGCATTGATGGGGCACATTTGTTTTTGATCTCCTTTGAGCATAAGCAACTGCATTTTTTAG
GTAAGATCTTTAGCGCTGAAGAATTGCAAGTCATGCCTTTTATGGTTATTTTGCTTTTTATAGGGATTTTTTTCATCACC
ACTAGCCTTGGGCGTGTGTGGTGCGGTTGGGCTTGCCCGCAAACCTTTTTAAGGGTGCTTTATAGAGATGTGATTGAAAC
CAAGATTTTCAAACTCCATAAAAAGATCAGCAACAAGCAAGAAAGCCCTAAAAACACCCCAAGCTACAAGGTGCGTAAAG
TATTGAGCGTTTTATTGTTCGCTCCTGTTGTGGCGGGGCTAATGATGTTGTTTTTCTTTTATTTCATCGCCCCTGAAGAC
TTTTTTATGTATCTTAAAAACCCTAGCGATCACCCTATCGCTATGGGTTTTTGGCTTTTTAGCACGGCTGTGGTGCTGTT
TGATATAGTGGTGGTTGCGGAGCGTTTTTGCATCTATTTATGCCCTTACGCTAGGGTGCAATCGGTGTTGTATGACAATG
ACACCTTAAACCCTATTTATGATGAAAAGCGCGGCGGAGCGCTTTATAACAATCAGGGCCATCTCTTCCCCCTACCCCCC
AAAAAACGCAACCCAGAAAACGAATGCGTGAATTGTTTGCATTGCGTGCAGGTTTGCCCCACGCATATTGATATCAGGAA
GGGCTTGCAATTAGAATGCATCAATTGCTTAGAATGCGTGGATGCATGCACAATTACCATGGCTAAATTCAAGCACCCTT
CACTCATCCAATGGTCTTCAACTAACGCCATTAACACGCGCCAAAAAGTGCGCTTGGTGCGTTTAAAAACGATCGCTTAT
TTGGGGGTTATCGCTATTGTGATCGCTCTTTTAGCCATCACTTCGTTTAAAAAAGAACGCATGCTCTTAGACATTAACCG
CAACAGCGATCTGTATGAATTGCGCTCTAGTGGGTATGTGGATAACGATTACGTGTTTTTATTCCATAACACGGACAATA
AAGACCATGAGTTTTATTTCAAAATTTTAGGGCAAAAAGACATTCAAATCAAAAAGCCTTTAAATCCTATCGCCATTAAA
GCCGGGCAAAAGATTAAAGCGGTAGTGATTTTAAGAAAACCCCTAAAAAATAACGCCACAGAATACAAACGCACTAGAGA
CGCTCTAATCCCCATTACCATACAAGCTTATAGCACAGACGATAAGAATATTACGATAGAAAGGGAATCGGTGTTTATCG
CGCCCAGTGAGGATTGA

Upstream 100 bases:

>100_bases
CCCTTTCAAATAAAATAGCGATCATTATAACATGTTGCTTTTTAAGTGAAAGCGTTAAGTTGTTAGGGTATAGTGGCTTA
AAAATTTTAGGATATTGAGA

Downstream 100 bases:

>100_bases
AGCCTAAAACTAGCGCTCAATCACTTCATAAGGCAAGCCTTGTTTGATCAATTCTTCCATAAAGGGATCGGTGTTTAATT
CTTCTATGTTAAACACCCCA

Product: ferrodoxin-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 458; Mature: 458

Protein sequence:

>458_residues
MLESSSHFLKSFRLKRYIGFLLISLALLITPFVRIDGAHLFLISFEHKQLHFLGKIFSAEELQVMPFMVILLFIGIFFIT
TSLGRVWCGWACPQTFLRVLYRDVIETKIFKLHKKISNKQESPKNTPSYKVRKVLSVLLFAPVVAGLMMLFFFYFIAPED
FFMYLKNPSDHPIAMGFWLFSTAVVLFDIVVVAERFCIYLCPYARVQSVLYDNDTLNPIYDEKRGGALYNNQGHLFPLPP
KKRNPENECVNCLHCVQVCPTHIDIRKGLQLECINCLECVDACTITMAKFKHPSLIQWSSTNAINTRQKVRLVRLKTIAY
LGVIAIVIALLAITSFKKERMLLDINRNSDLYELRSSGYVDNDYVFLFHNTDNKDHEFYFKILGQKDIQIKKPLNPIAIK
AGQKIKAVVILRKPLKNNATEYKRTRDALIPITIQAYSTDDKNITIERESVFIAPSED

Sequences:

>Translated_458_residues
MLESSSHFLKSFRLKRYIGFLLISLALLITPFVRIDGAHLFLISFEHKQLHFLGKIFSAEELQVMPFMVILLFIGIFFIT
TSLGRVWCGWACPQTFLRVLYRDVIETKIFKLHKKISNKQESPKNTPSYKVRKVLSVLLFAPVVAGLMMLFFFYFIAPED
FFMYLKNPSDHPIAMGFWLFSTAVVLFDIVVVAERFCIYLCPYARVQSVLYDNDTLNPIYDEKRGGALYNNQGHLFPLPP
KKRNPENECVNCLHCVQVCPTHIDIRKGLQLECINCLECVDACTITMAKFKHPSLIQWSSTNAINTRQKVRLVRLKTIAY
LGVIAIVIALLAITSFKKERMLLDINRNSDLYELRSSGYVDNDYVFLFHNTDNKDHEFYFKILGQKDIQIKKPLNPIAIK
AGQKIKAVVILRKPLKNNATEYKRTRDALIPITIQAYSTDDKNITIERESVFIAPSED
>Mature_458_residues
MLESSSHFLKSFRLKRYIGFLLISLALLITPFVRIDGAHLFLISFEHKQLHFLGKIFSAEELQVMPFMVILLFIGIFFIT
TSLGRVWCGWACPQTFLRVLYRDVIETKIFKLHKKISNKQESPKNTPSYKVRKVLSVLLFAPVVAGLMMLFFFYFIAPED
FFMYLKNPSDHPIAMGFWLFSTAVVLFDIVVVAERFCIYLCPYARVQSVLYDNDTLNPIYDEKRGGALYNNQGHLFPLPP
KKRNPENECVNCLHCVQVCPTHIDIRKGLQLECINCLECVDACTITMAKFKHPSLIQWSSTNAINTRQKVRLVRLKTIAY
LGVIAIVIALLAITSFKKERMLLDINRNSDLYELRSSGYVDNDYVFLFHNTDNKDHEFYFKILGQKDIQIKKPLNPIAIK
AGQKIKAVVILRKPLKNNATEYKRTRDALIPITIQAYSTDDKNITIERESVFIAPSED

Specific function: Predicted to be involved in a redox process [H]

COG id: COG0348

COG function: function code C; Polyferredoxin

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR014116
- InterPro:   IPR012285
- InterPro:   IPR013783 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52818; Mature: 52818

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLESSSHFLKSFRLKRYIGFLLISLALLITPFVRIDGAHLFLISFEHKQLHFLGKIFSAE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEEECCHHHHHHHHHHCCC
ELQVMPFMVILLFIGIFFITTSLGRVWCGWACPQTFLRVLYRDVIETKIFKLHKKISNKQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
ESPKNTPSYKVRKVLSVLLFAPVVAGLMMLFFFYFIAPEDFFMYLKNPSDHPIAMGFWLF
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEHHHHHH
STAVVLFDIVVVAERFCIYLCPYARVQSVLYDNDTLNPIYDEKRGGALYNNQGHLFPLPP
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCEEECCC
KKRNPENECVNCLHCVQVCPTHIDIRKGLQLECINCLECVDACTITMAKFKHPSLIQWSS
CCCCCHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECC
TNAINTRQKVRLVRLKTIAYLGVIAIVIALLAITSFKKERMLLDINRNSDLYELRSSGYV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHCCCC
DNDYVFLFHNTDNKDHEFYFKILGQKDIQIKKPLNPIAIKAGQKIKAVVILRKPLKNNAT
CCCEEEEEECCCCCCCEEEEEEECCCCCEEECCCCCEEEECCCCEEEEEEEECCCCCCHH
EYKRTRDALIPITIQAYSTDDKNITIERESVFIAPSED
HHHHHCCCEEEEEEEEEECCCCEEEEEECEEEEECCCC
>Mature Secondary Structure
MLESSSHFLKSFRLKRYIGFLLISLALLITPFVRIDGAHLFLISFEHKQLHFLGKIFSAE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEEECCHHHHHHHHHHCCC
ELQVMPFMVILLFIGIFFITTSLGRVWCGWACPQTFLRVLYRDVIETKIFKLHKKISNKQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
ESPKNTPSYKVRKVLSVLLFAPVVAGLMMLFFFYFIAPEDFFMYLKNPSDHPIAMGFWLF
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEHHHHHH
STAVVLFDIVVVAERFCIYLCPYARVQSVLYDNDTLNPIYDEKRGGALYNNQGHLFPLPP
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCEEECCC
KKRNPENECVNCLHCVQVCPTHIDIRKGLQLECINCLECVDACTITMAKFKHPSLIQWSS
CCCCCHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECC
TNAINTRQKVRLVRLKTIAYLGVIAIVIALLAITSFKKERMLLDINRNSDLYELRSSGYV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHCCCC
DNDYVFLFHNTDNKDHEFYFKILGQKDIQIKKPLNPIAIKAGQKIKAVVILRKPLKNNAT
CCCEEEEEECCCCCCCEEEEEEECCCCCEEECCCCCEEEECCCCEEEEEEEECCCCCCHH
EYKRTRDALIPITIQAYSTDDKNITIERESVFIAPSED
HHHHHCCCEEEEEEEEEECCCCEEEEEECEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1400197 [H]