Definition Helicobacter pylori HPAG1 chromosome, complete genome.
Accession NC_008086
Length 1,596,366

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The map label for this gene is hpn

Identifier: 108563777

GI number: 108563777

Start: 1403707

End: 1403889

Strand: Reverse

Name: hpn

Synonym: HPAG1_1352

Alternate gene names: 108563777

Gene position: 1403889-1403707 (Counterclockwise)

Preceding gene: 108563778

Following gene: 108563776

Centisome position: 87.94

GC content: 52.46

Gene sequence:

>183_bases
ATGGCACACCATGAAGAACAACACGGCGGGCACCACCACCATCACCACCACACACACCACCACCACTATCATGGCGGTGA
ACACCACCATCACCACCACAGCTCTCATCATGAAGAAGGTTGTTGCAGCACTAGCGATAGTCATCATCAAGAAGAAGGTT
GTTGCCACGGGCATCACGAGTAA

Upstream 100 bases:

>100_bases
CGTTAAAATTCCTTTCATTAACAATTAATTAGATTTTATATTGTAGAATGAAATTCTAGCCAGTGAGCTAGAATTTAAAT
TTTTAATCAAAGGAGTCATC

Downstream 100 bases:

>100_bases
TATCGGTGTGGCTAGGGGCAACTTGACTAGGGTTGCCTCTGGCTTTGACTTTAAAATACAATCATTCCATTCTAACCCAT
TCTGATCAAACCCGTTAAAT

Product: histidine-rich metal binding polypeptide

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 60; Mature: 59

Protein sequence:

>60_residues
MAHHEEQHGGHHHHHHHTHHHHYHGGEHHHHHHSSHHEEGCCSTSDSHHQEEGCCHGHHE

Sequences:

>Translated_60_residues
MAHHEEQHGGHHHHHHHTHHHHYHGGEHHHHHHSSHHEEGCCSTSDSHHQEEGCCHGHHE
>Mature_59_residues
AHHEEQHGGHHHHHHHTHHHHYHGGEHHHHHHSSHHEEGCCSTSDSHHQEEGCCHGHHE

Specific function: Strongly binds nickel and zinc. Binds other metals less strongly:cobalt > copper > cadmium > manganese. May act to increase, or at least to preserve, urease activity. Exact function is still unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): HPN_HELPJ (P0A0V7)

Other databases:

- EMBL:   AE001439
- PIR:   C64698
- RefSeq:   NP_224038.1
- GeneID:   889511
- GenomeReviews:   AE001439_GR
- KEGG:   hpj:jhp1320
- HOGENOM:   HBG099251
- OMA:   DAHHHEP
- ProtClustDB:   CLSK477944
- BioCyc:   HPYL85963:JHP1320-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7077; Mature: 6946

Theoretical pI: Translated: 6.82; Mature: 6.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
8.3 %Cys+Met (Translated Protein)
6.8 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHHEEQHGGHHHHHHHTHHHHYHGGEHHHHHHSSHHEEGCCSTSDSHHQEEGCCHGHHE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AHHEEQHGGHHHHHHHTHHHHYHGGEHHHHHHSSHHEEGCCSTSDSHHQEEGCCHGHHE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9923682